RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 GPRC5DQ9NZD1 345 aa7.17□□□□□ -1.26
CPNE3-208ENST00000614678 CNOT7Q9UIV1 285 aaKnown RBP7.17□□□□□ -1.26
CPNE3-208ENST00000614678 ITGBL1O95965 494 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-208ENST00000614678 UBTFL1P0CB47 393 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-208ENST00000614678 BCAMP50895 628 aa7.17□□□□□ -1.26
CPNE3-208ENST00000614678 CC2D2BQ6DHV5 1058 aa7.17□□□□□ -1.26
CPNE3-208ENST00000614678 VGLL2Q8N8G2 317 aa7.17□□□□□ -1.26
CPNE3-208ENST00000614678 GLIS2Q9BZE0 524 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-208ENST00000614678 BRPF1P55201 1214 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-208ENST00000614678 GTF2IP78347 998 aa7.17□□□□□ -1.26
CPNE3-208ENST00000614678 TAF7LQ5H9L4 462 aa7.17□□□□□ -1.26
CPNE3-208ENST00000614678 INTS3Q68E01 1043 aaKnown RBP7.17□□□□□ -1.26
CPNE3-208ENST00000614678 ITPRIPQ8IWB1 547 aa7.17□□□□□ -1.26
CPNE3-208ENST00000614678 C16orf71Q8IYS4 520 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-208ENST00000614678 HACL1Q9UJ83 578 aa7.17□□□□□ -1.26
CPNE3-208ENST00000614678 ADORA1P30542 326 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 KIAA0825Q8IV33 1275 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 TMX4Q9H1E5 349 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-208ENST00000614678 HSPA6P17066 643 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 NBPF9Q3BBW0 867 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 ADM5C9JUS6 153 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 TIMM10P62072 90 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 ZKSCAN2Q63HK3 967 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 PI16Q6UXB8 463 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 DNAJC5GQ8N7S2 189 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 FAM84BQ96KN1 310 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-208ENST00000614678 ZBTB7BO15156 539 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-208ENST00000614678 SASH1O94885 1247 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 CDAN1Q8IWY9 1227 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 CHMP4AQ9BY43 222 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 API5Q9BZZ5 524 aaKnown RBP7.16□□□□□ -1.26
CPNE3-208ENST00000614678 CD209Q9NNX6 404 aa7.16□□□□□ -1.26
CPNE3-208ENST00000614678 MKRN1Q9UHC7 482 aaKnown RBP7.16□□□□□ -1.26
CPNE3-208ENST00000614678 COL1A1P02452 1464 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-208ENST00000614678 SRGAP3O43295 1099 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 DACT2Q5SW24 774 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 CST9Q5W186 159 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 MOB2Q70IA6 237 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 CNTROBQ8N137 903 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 RCAN3Q9UKA8 241 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 NDUFB9Q9Y6M9 179 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 KIF16BQ96L93 1317 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 SCN4AP35499 1836 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 SLURP2P0DP57 97 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 KCNJ4P48050 445 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 GRM1Q13255 1194 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 METTL24Q5JXM2 366 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 DZIP1LQ8IYY4 767 aaKnown RBP7.15□□□□□ -1.26
CPNE3-208ENST00000614678 ZNF408Q9H9D4 720 aa7.15□□□□□ -1.26
CPNE3-208ENST00000614678 G3V3G9 751 aa7.15□□□□□ -1.27
CPNE3-208ENST00000614678 APBB1O00213 710 aa7.15□□□□□ -1.27
CPNE3-208ENST00000614678 VIL1P09327 827 aaKnown RBP7.15□□□□□ -1.27
CPNE3-208ENST00000614678 ATP2B4P23634 1241 aa7.15□□□□□ -1.27
CPNE3-208ENST00000614678 DCAF8Q5TAQ9 597 aa7.15□□□□□ -1.27
CPNE3-208ENST00000614678 SIRT2Q8IXJ6 389 aa7.15□□□□□ -1.27
CPNE3-208ENST00000614678 GMLQ99445 158 aa7.15□□□□□ -1.27
CPNE3-208ENST00000614678 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.15□□□□□ -1.27
CPNE3-208ENST00000614678 ZC3H4Q9UPT8 1303 aaKnown RBP7.14□□□□□ -1.27
CPNE3-208ENST00000614678 TTLL5Q6EMB2 1281 aa7.14□□□□□ -1.27
CPNE3-208ENST00000614678 RBM46Q8TBY0 533 aaKnown RBP7.14□□□□□ -1.27
CPNE3-208ENST00000614678 ZIC5Q96T25 663 aa7.14□□□□□ -1.27
CPNE3-208ENST00000614678 CT47B1P0C2W7 299 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-208ENST00000614678 TFCP2Q12800 502 aa7.14□□□□□ -1.27
CPNE3-208ENST00000614678 MED23Q9ULK4 1368 aa7.14□□□□□ -1.27
CPNE3-208ENST00000614678 CHAF1AQ13111 956 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-208ENST00000614678 CHADLQ6NUI6 762 aa7.14□□□□□ -1.27
CPNE3-208ENST00000614678 SUPT20HQ8NEM7 779 aa7.14□□□□□ -1.27
CPNE3-208ENST00000614678 ARHGAP45Q92619 1136 aa7.14□□□□□ -1.27
CPNE3-208ENST00000614678 TLR7Q9NYK1 1049 aaKnown RBP7.14□□□□□ -1.27
CPNE3-208ENST00000614678 EYA2O00167 538 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 PDE8BO95263 885 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 CACNB3P54284 484 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 IRX6P78412 446 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-208ENST00000614678 RSBN1LQ6PCB5 846 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-208ENST00000614678 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 FTSJ3Q8IY81 847 aaKnown RBP7.13□□□□□ -1.27
CPNE3-208ENST00000614678 SMC1BQ8NDV3 1235 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 PASKQ96RG2 1323 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 PHKA1P46020 1223 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 TMC4Q7Z404 712 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 USP17L3A6NCW0 530 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 USP17L4A6NCW7 530 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 FGFR2P21802 821 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 SCARF1Q14162 830 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 USP17L1Q7RTZ2 530 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 EYA3Q99504 573 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 GGA3Q9NZ52 723 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 EXOC6BQ9Y2D4 811 aa7.13□□□□□ -1.27
CPNE3-208ENST00000614678 CLRN2A0PK11 232 aa7.12□□□□□ -1.27
CPNE3-208ENST00000614678 LMOD1P29536 600 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-208ENST00000614678 PRKG1Q13976 671 aa7.12□□□□□ -1.27
CPNE3-208ENST00000614678 ANGEL2Q5VTE6 544 aaKnown RBP7.12□□□□□ -1.27
CPNE3-208ENST00000614678 LEMD3Q9Y2U8 911 aa7.12□□□□□ -1.27
CPNE3-208ENST00000614678 PSME4Q14997 1843 aa7.12□□□□□ -1.27
CPNE3-208ENST00000614678 IQCA1LA6NCM1 817 aa7.12□□□□□ -1.27
CPNE3-208ENST00000614678 LDHDQ86WU2 507 aa7.12□□□□□ -1.27
CPNE3-208ENST00000614678 ADARB2Q9NS39 739 aaKnown RBP7.12□□□□□ -1.27
CPNE3-208ENST00000614678 WNT10BO00744 389 aa7.12□□□□□ -1.27
CPNE3-208ENST00000614678 CHGBP05060 677 aa7.12□□□□□ -1.27
CPNE3-208ENST00000614678 KIF4BQ2VIQ3 1234 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms