RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 PAG1Q9NWQ8 432 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 IQGAP3Q86VI3 1631 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 AATKQ6ZMQ8 1374 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 ERVV-2B6SEH9 535 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 HCLS1P14317 486 aaPredicted RBP16.9■□□□□ 0.3
SNPH-203ENST00000614659 GNAT2P19087 354 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 ARAP3Q8WWN8 1544 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 IRS4O14654 1257 aaPredicted RBP16.9■□□□□ 0.3
SNPH-203ENST00000614659 RNF113AO15541 343 aaKnown RBP16.9■□□□□ 0.3
SNPH-203ENST00000614659 Q6ZUG5 572 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 DDX21Q9NR30 783 aaKnown RBP eCLIP16.9■□□□□ 0.3
SNPH-203ENST00000614659 MAST3O60307 1309 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 KLF18A0A0U1RQI7 1052 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 KAT14Q9H8E8 782 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.89■□□□□ 0.3
SNPH-203ENST00000614659 TMC6Q7Z403 805 aa16.89■□□□□ 0.29
SNPH-203ENST00000614659 ZHX3Q9H4I2 956 aa16.89■□□□□ 0.29
SNPH-203ENST00000614659 CTAGE1Q96RT6 745 aa16.89■□□□□ 0.29
SNPH-203ENST00000614659 JAKMIP3Q5VZ66 844 aa16.89■□□□□ 0.29
SNPH-203ENST00000614659 GTPBP4Q9BZE4 634 aaKnown RBP16.89■□□□□ 0.29
SNPH-203ENST00000614659 H0YIN7 160 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 ZBTB43O43298 467 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 LTKP29376 864 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 BRAPQ7Z569 592 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 SCLT1Q96NL6 688 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 SNW1Q13573 536 aaKnown RBP16.88■□□□□ 0.29
SNPH-203ENST00000614659 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 USO1O60763 962 aaKnown RBP16.88■□□□□ 0.29
SNPH-203ENST00000614659 SYKP43405 635 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 CBX1P83916 185 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 TET3O43151 1660 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 TSPY2A6NKD2 308 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 ANXA1P04083 346 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 RXRBP28702 533 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
SNPH-203ENST00000614659 KIF1BO60333 1816 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 WTAPQ15007 396 aa16.88■□□□□ 0.29
SNPH-203ENST00000614659 MATR3P43243 847 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNPH-203ENST00000614659 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
SNPH-203ENST00000614659 ZRSR2Q15696 482 aaKnown RBP16.87■□□□□ 0.29
SNPH-203ENST00000614659 ANO6Q4KMQ2 910 aa16.87■□□□□ 0.29
SNPH-203ENST00000614659 ZFYVE27Q5T4F4 411 aa16.87■□□□□ 0.29
SNPH-203ENST00000614659 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
SNPH-203ENST00000614659 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
SNPH-203ENST00000614659 RTL9Q8NET4 1388 aa16.87■□□□□ 0.29
SNPH-203ENST00000614659 URI1O94763 535 aaPredicted RBP16.87■□□□□ 0.29
SNPH-203ENST00000614659 EHBP1Q8NDI1 1231 aa16.87■□□□□ 0.29
SNPH-203ENST00000614659 CCDC102AQ96A19 550 aa16.87■□□□□ 0.29
SNPH-203ENST00000614659 PRDM10Q9NQV6 1147 aa16.87■□□□□ 0.29
SNPH-203ENST00000614659 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 GNAQP50148 359 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 SPAG1Q07617 926 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 DHX32Q7L7V1 743 aaKnown RBP16.86■□□□□ 0.29
SNPH-203ENST00000614659 PLBD2Q8NHP8 589 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 SLC26A6Q9BXS9 759 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 SSBP05455 408 aaKnown RBP eCLIP16.86■□□□□ 0.29
SNPH-203ENST00000614659 CALM1P0DP23 149 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 CALM2P0DP24 149 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 CALM3P0DP25 149 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 NOLC1Q14978 699 aaKnown RBP eCLIP16.86■□□□□ 0.29
SNPH-203ENST00000614659 VPS36Q86VN1 386 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 ESR2Q92731 530 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 PLCD4Q9BRC7 762 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 LLPHQ9BRT6 129 aaKnown RBP16.86■□□□□ 0.29
SNPH-203ENST00000614659 ALG1Q9BT22 464 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 TCP11L1Q9NUJ3 509 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 TSPOAP1O95153 1857 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 KIF4BQ2VIQ3 1234 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 CALML4Q96GE6 196 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 SH2D4AQ9H788 454 aa16.86■□□□□ 0.29
SNPH-203ENST00000614659 ALDH1B1P30837 517 aa16.85■□□□□ 0.29
SNPH-203ENST00000614659 DNM1Q05193 864 aaKnown RBP16.85■□□□□ 0.29
SNPH-203ENST00000614659 SLC52A2Q9HAB3 445 aa16.85■□□□□ 0.29
SNPH-203ENST00000614659 CALCOCO1Q9P1Z2 691 aa16.85■□□□□ 0.29
SNPH-203ENST00000614659 ZNF790Q6PG37 636 aa16.85■□□□□ 0.29
SNPH-203ENST00000614659 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
SNPH-203ENST00000614659 PAF1Q8N7H5 531 aa16.85■□□□□ 0.29
SNPH-203ENST00000614659 C16orf45Q96MC5 204 aaPredicted RBP16.85■□□□□ 0.29
SNPH-203ENST00000614659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.85■□□□□ 0.29
SNPH-203ENST00000614659 PRIM1P49642 420 aaKnown RBP16.85■□□□□ 0.29
SNPH-203ENST00000614659 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
SNPH-203ENST00000614659 CYP7A1P22680 504 aa16.85■□□□□ 0.29
SNPH-203ENST00000614659 NUP88Q99567 741 aaPredicted RBP16.85■□□□□ 0.29
SNPH-203ENST00000614659 KLHL10Q6JEL2 608 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 FAM196AQ6ZSG2 479 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 CRACR2AQ9BSW2 395 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 DACT1Q9NYF0 836 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 NSFL1CQ9UNZ2 370 aaKnown RBP16.84■□□□□ 0.29
SNPH-203ENST00000614659 ZNF445P59923 1031 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 TYRO3Q06418 890 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 RTN1Q16799 776 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 SNRKQ9NRH2 765 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 QTRT2Q9H974 415 aaKnown RBP16.84■□□□□ 0.29
SNPH-203ENST00000614659 UNC13BO14795 1591 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 HAND2P61296 217 aa16.84■□□□□ 0.29
SNPH-203ENST00000614659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.84■□□□□ 0.29
SNPH-203ENST00000614659 SRRTQ9BXP5 876 aaKnown RBP16.84■□□□□ 0.29
SNPH-203ENST00000614659 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms