RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 C10orf71Q711Q0 1435 aa21.35■■□□□ 1.01
GEN1-208ENST00000614478 TAF1P21675 1872 aa21.35■■□□□ 1.01
GEN1-208ENST00000614478 HSPA4P34932 840 aa21.35■■□□□ 1.01
GEN1-208ENST00000614478 ANAPC15P60006 121 aa21.35■■□□□ 1.01
GEN1-208ENST00000614478 FKBP4Q02790 459 aaKnown RBP eCLIP21.35■■□□□ 1.01
GEN1-208ENST00000614478 CHRNDQ07001 517 aa21.35■■□□□ 1.01
GEN1-208ENST00000614478 SNRKQ9NRH2 765 aa21.35■■□□□ 1.01
GEN1-208ENST00000614478 PALD1Q9ULE6 856 aa21.35■■□□□ 1.01
GEN1-208ENST00000614478 SLC5A1P13866 664 aa21.34■■□□□ 1.01
GEN1-208ENST00000614478 SCARF1Q14162 830 aa21.34■■□□□ 1.01
GEN1-208ENST00000614478 BSDC1Q9NW68 430 aaPredicted RBP21.34■■□□□ 1.01
GEN1-208ENST00000614478 CD2BP2O95400 341 aaKnown RBP21.33■■□□□ 1.01
GEN1-208ENST00000614478 PTH1RQ03431 593 aa21.33■■□□□ 1.01
GEN1-208ENST00000614478 CELF1Q92879 486 aaKnown RBP21.33■■□□□ 1.01
GEN1-208ENST00000614478 ZNF512BQ96KM6 892 aaPredicted RBP21.33■■□□□ 1.01
GEN1-208ENST00000614478 ANTXR1Q9H6X2 564 aa21.33■■□□□ 1.01
GEN1-208ENST00000614478 SNAP23O00161 211 aa21.32■■□□□ 1
GEN1-208ENST00000614478 TICAM2Q86XR7 235 aa21.32■■□□□ 1
GEN1-208ENST00000614478 PPP1R1BQ9UD71 204 aaPredicted RBP21.32■■□□□ 1
GEN1-208ENST00000614478 MED23Q9ULK4 1368 aa21.32■■□□□ 1
GEN1-208ENST00000614478 CHGBP05060 677 aa21.32■■□□□ 1
GEN1-208ENST00000614478 CCDC102BQ68D86 513 aa21.32■■□□□ 1
GEN1-208ENST00000614478 ARAP2Q8WZ64 1704 aa21.32■■□□□ 1
GEN1-208ENST00000614478 CCDC171Q6TFL3 1326 aa21.31■■□□□ 1
GEN1-208ENST00000614478 MCAMP43121 646 aa21.31■■□□□ 1
GEN1-208ENST00000614478 ZAP70P43403 619 aa21.31■■□□□ 1
GEN1-208ENST00000614478 IL17RAQ96F46 866 aa21.31■■□□□ 1
GEN1-208ENST00000614478 BRIP1Q9BX63 1249 aa21.31■■□□□ 1
GEN1-208ENST00000614478 TNRC6CQ9HCJ0 1690 aaKnown RBP21.31■■□□□ 1
GEN1-208ENST00000614478 PHKA1P46020 1223 aa21.3■■□□□ 1
GEN1-208ENST00000614478 RPS8P62241 208 aaKnown RBP21.3■■□□□ 1
GEN1-208ENST00000614478 ZNF589Q86UQ0 364 aaPredicted RBP21.3■■□□□ 1
GEN1-208ENST00000614478 IL27Q8NEV9 243 aa21.3■■□□□ 1
GEN1-208ENST00000614478 CD2APQ9Y5K6 639 aa21.3■■□□□ 1
GEN1-208ENST00000614478 PI16Q6UXB8 463 aa21.3■■□□□ 1
GEN1-208ENST00000614478 MINPP1Q9UNW1 487 aa21.3■■□□□ 1
GEN1-208ENST00000614478 AKAP11Q9UKA4 1901 aa21.29■■□□□ 1
GEN1-208ENST00000614478 DLEC1Q9Y238 1755 aa21.29■■□□□ 1
GEN1-208ENST00000614478 UQCRFS1P1P0C7P4 283 aa21.29■■□□□ 1
GEN1-208ENST00000614478 ARID4AP29374 1257 aaPredicted RBP21.29■■□□□ 1
GEN1-208ENST00000614478 MCMDC2Q4G0Z9 681 aa21.29■■□□□ 1
GEN1-208ENST00000614478 KIAA1551Q9HCM1 1747 aa21.29■■□□□ 1
GEN1-208ENST00000614478 K7ELQ4 463 aaPredicted RBP21.28■■□□□ 1
GEN1-208ENST00000614478 ST18O60284 1047 aa21.28■■□□□ 1
GEN1-208ENST00000614478 PDE6BP35913 854 aa21.28■■□□□ 1
GEN1-208ENST00000614478 SPRYD3Q8NCJ5 442 aa21.28■■□□□ 1
GEN1-208ENST00000614478 MAP4K1Q92918 833 aa21.28■■□□□ 1
GEN1-208ENST00000614478 SEC62Q99442 399 aaKnown RBP21.28■■□□□ 1
GEN1-208ENST00000614478 COL11A2P13942 1736 aaPredicted RBP21.28■■□□□ 1
GEN1-208ENST00000614478 RNF113AO15541 343 aaKnown RBP21.28■■□□□ 1
GEN1-208ENST00000614478 LRRFIP1Q32MZ4 808 aaKnown RBP21.27■■□□□ 1
GEN1-208ENST00000614478 SLFNL1Q499Z3 407 aa21.27■■□□□ 1
GEN1-208ENST00000614478 KLHL34Q8N239 644 aa21.27■■□□□ 1
GEN1-208ENST00000614478 SLKQ9H2G2 1235 aaPredicted RBP21.27■■□□□ 1
GEN1-208ENST00000614478 HELLSQ9NRZ9 838 aa21.27■■□□□ 1
GEN1-208ENST00000614478 SNX14Q9Y5W7 946 aa21.27■■□□□ 1
GEN1-208ENST00000614478 A0A1B0GUL6 1792 aa21.27■■□□□ 1
GEN1-208ENST00000614478 KLRG2A4D1S0 409 aaPredicted RBP21.26■□□□□ 0.99
GEN1-208ENST00000614478 NEK4P51957 841 aa21.26■□□□□ 0.99
GEN1-208ENST00000614478 NECTIN1Q15223 517 aa21.26■□□□□ 0.99
GEN1-208ENST00000614478 ZMYM1Q5SVZ6 1142 aa21.26■□□□□ 0.99
GEN1-208ENST00000614478 RASEFQ8IZ41 740 aa21.26■□□□□ 0.99
GEN1-208ENST00000614478 FHDC1Q9C0D6 1143 aaPredicted RBP21.26■□□□□ 0.99
GEN1-208ENST00000614478 RBM8AQ9Y5S9 174 aaKnown RBP21.26■□□□□ 0.99
GEN1-208ENST00000614478 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
GEN1-208ENST00000614478 KCNJ4P48050 445 aa21.26■□□□□ 0.99
GEN1-208ENST00000614478 TGFB2P61812 414 aa21.26■□□□□ 0.99
GEN1-208ENST00000614478 NBR1Q14596 966 aa21.26■□□□□ 0.99
GEN1-208ENST00000614478 PRPF40BQ6NWY9 871 aaKnown RBP21.26■□□□□ 0.99
GEN1-208ENST00000614478 CCDC129Q6ZRS4 1044 aa21.26■□□□□ 0.99
GEN1-208ENST00000614478 GOLGB1Q14789 3259 aaKnown RBP21.25■□□□□ 0.99
GEN1-208ENST00000614478 CYP2E1P05181 493 aaPredicted RBP21.25■□□□□ 0.99
GEN1-208ENST00000614478 BCAMP50895 628 aa21.25■□□□□ 0.99
GEN1-208ENST00000614478 UBE4AQ14139 1066 aa21.25■□□□□ 0.99
GEN1-208ENST00000614478 TTF1Q15361 905 aaPredicted RBP21.24■□□□□ 0.99
GEN1-208ENST00000614478 CRY2Q49AN0 593 aa21.24■□□□□ 0.99
GEN1-208ENST00000614478 KCNB2Q92953 911 aa21.24■□□□□ 0.99
GEN1-208ENST00000614478 HMG20BQ9P0W2 317 aa21.24■□□□□ 0.99
GEN1-208ENST00000614478 ZFYP08048 801 aaPredicted RBP21.24■□□□□ 0.99
GEN1-208ENST00000614478 CACNA1SQ13698 1873 aa21.23■□□□□ 0.99
GEN1-208ENST00000614478 WTIPA6NIX2 430 aaPredicted RBP21.23■□□□□ 0.99
GEN1-208ENST00000614478 GRAPQ13588 217 aa21.23■□□□□ 0.99
GEN1-208ENST00000614478 RASGRF1Q13972 1273 aa21.23■□□□□ 0.99
GEN1-208ENST00000614478 CREB3L3Q68CJ9 461 aa21.23■□□□□ 0.99
GEN1-208ENST00000614478 SPATA5Q8NB90 893 aa21.23■□□□□ 0.99
GEN1-208ENST00000614478 GRAPLQ8TC17 118 aaPredicted RBP21.23■□□□□ 0.99
GEN1-208ENST00000614478 ANKRD2Q9GZV1 360 aa21.23■□□□□ 0.99
GEN1-208ENST00000614478 H0YIN7 160 aa21.22■□□□□ 0.99
GEN1-208ENST00000614478 NFKBIBQ15653 356 aa21.22■□□□□ 0.99
GEN1-208ENST00000614478 SYT17Q9BSW7 474 aa21.22■□□□□ 0.99
GEN1-208ENST00000614478 UPF3BQ9BZI7 483 aaKnown RBP21.22■□□□□ 0.99
GEN1-208ENST00000614478 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.22■□□□□ 0.99
GEN1-208ENST00000614478 SRGNP10124 158 aa21.22■□□□□ 0.99
GEN1-208ENST00000614478 C2CD5Q86YS7 1000 aa21.22■□□□□ 0.99
GEN1-208ENST00000614478 RPGRQ92834 1020 aaKnown RBP21.22■□□□□ 0.99
GEN1-208ENST00000614478 PIH1D3Q9NQM4 214 aaKnown RBP21.22■□□□□ 0.99
GEN1-208ENST00000614478 CHMP5Q9NZZ3 219 aa21.22■□□□□ 0.99
GEN1-208ENST00000614478 MYH7P12883 1935 aa21.21■□□□□ 0.99
GEN1-208ENST00000614478 SLC27A2O14975 620 aa21.21■□□□□ 0.99
GEN1-208ENST00000614478 ZKSCAN1P17029 563 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms