RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 ATP2B3Q16720 1220 aa23.41■■□□□ 1.34
SMARCD2-212ENST00000613943 CNNM1Q9NRU3 951 aa23.41■■□□□ 1.34
SMARCD2-212ENST00000613943 ZSCAN30Q86W11 494 aa23.4■■□□□ 1.34
SMARCD2-212ENST00000613943 DZIP3Q86Y13 1208 aaKnown RBP23.4■■□□□ 1.34
SMARCD2-212ENST00000613943 MCAMP43121 646 aa23.39■■□□□ 1.34
SMARCD2-212ENST00000613943 HELBQ8NG08 1087 aaPredicted RBP23.39■■□□□ 1.34
SMARCD2-212ENST00000613943 SNAP23O00161 211 aa23.39■■□□□ 1.33
SMARCD2-212ENST00000613943 LIG1P18858 919 aa23.39■■□□□ 1.33
SMARCD2-212ENST00000613943 CTDNEP1O95476 244 aa23.38■■□□□ 1.33
SMARCD2-212ENST00000613943 CAMK4Q16566 473 aa23.38■■□□□ 1.33
SMARCD2-212ENST00000613943 NAP1L5Q96NT1 182 aaPredicted RBP23.38■■□□□ 1.33
SMARCD2-212ENST00000613943 EXOSC10Q01780 885 aaKnown RBP23.38■■□□□ 1.33
SMARCD2-212ENST00000613943 ANKRD18BA2A2Z9 1011 aa23.37■■□□□ 1.33
SMARCD2-212ENST00000613943 CSPP1Q1MSJ5 1256 aa23.37■■□□□ 1.33
SMARCD2-212ENST00000613943 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.37■■□□□ 1.33
SMARCD2-212ENST00000613943 USP25Q9UHP3 1055 aa23.37■■□□□ 1.33
SMARCD2-212ENST00000613943 H3BQV1 296 aa23.37■■□□□ 1.33
SMARCD2-212ENST00000613943 CEBPZQ03701 1054 aaKnown RBP23.37■■□□□ 1.33
SMARCD2-212ENST00000613943 IFFO2Q5TF58 517 aa23.37■■□□□ 1.33
SMARCD2-212ENST00000613943 RAB11FIP4Q86YS3 637 aa23.37■■□□□ 1.33
SMARCD2-212ENST00000613943 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.37■■□□□ 1.33
SMARCD2-212ENST00000613943 FAM184AQ8NB25 1140 aa23.36■■□□□ 1.33
SMARCD2-212ENST00000613943 NSUN7Q8NE18 718 aaKnown RBP23.36■■□□□ 1.33
SMARCD2-212ENST00000613943 CDHR2Q9BYE9 1310 aa23.36■■□□□ 1.33
SMARCD2-212ENST00000613943 PFKFB2O60825 505 aa23.36■■□□□ 1.33
SMARCD2-212ENST00000613943 FGAP02671 866 aa23.36■■□□□ 1.33
SMARCD2-212ENST00000613943 MSNP26038 577 aaKnown RBP23.36■■□□□ 1.33
SMARCD2-212ENST00000613943 SPATA32Q96LK8 384 aa23.36■■□□□ 1.33
SMARCD2-212ENST00000613943 LRP6O75581 1613 aa23.35■■□□□ 1.33
SMARCD2-212ENST00000613943 PTPDC1A2A3K4 754 aa23.35■■□□□ 1.33
SMARCD2-212ENST00000613943 HMGB1P09429 215 aaKnown RBP23.35■■□□□ 1.33
SMARCD2-212ENST00000613943 FTOQ9C0B1 505 aaKnown RBP eCLIP23.35■■□□□ 1.33
SMARCD2-212ENST00000613943 LAMA4Q16363 1823 aa23.35■■□□□ 1.33
SMARCD2-212ENST00000613943 GUCY1B3Q02153 619 aa23.34■■□□□ 1.33
SMARCD2-212ENST00000613943 RESTQ13127 1097 aa23.34■■□□□ 1.33
SMARCD2-212ENST00000613943 FBXO3Q9UK99 471 aa23.34■■□□□ 1.33
SMARCD2-212ENST00000613943 DENND2AQ9ULE3 1009 aa23.34■■□□□ 1.33
SMARCD2-212ENST00000613943 VGLL2Q8N8G2 317 aa23.34■■□□□ 1.33
SMARCD2-212ENST00000613943 LEO1Q8WVC0 666 aaPredicted RBP23.34■■□□□ 1.33
SMARCD2-212ENST00000613943 GPAA1O43292 621 aa23.33■■□□□ 1.33
SMARCD2-212ENST00000613943 PHKA1P46020 1223 aa23.33■■□□□ 1.33
SMARCD2-212ENST00000613943 FUCA2Q9BTY2 467 aa23.33■■□□□ 1.33
SMARCD2-212ENST00000613943 SLIT2O94813 1529 aa23.33■■□□□ 1.33
SMARCD2-212ENST00000613943 COL16A1Q07092 1604 aaPredicted RBP23.33■■□□□ 1.33
SMARCD2-212ENST00000613943 SMARCC2Q8TAQ2 1214 aa23.33■■□□□ 1.33
SMARCD2-212ENST00000613943 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.32
SMARCD2-212ENST00000613943 IDH1O75874 414 aaKnown RBP23.32■■□□□ 1.32
SMARCD2-212ENST00000613943 PDIA3P30101 505 aaKnown RBP23.32■■□□□ 1.32
SMARCD2-212ENST00000613943 NKX2-3Q8TAU0 364 aa23.32■■□□□ 1.32
SMARCD2-212ENST00000613943 APPBP2Q92624 585 aa23.32■■□□□ 1.32
SMARCD2-212ENST00000613943 PIH1D3Q9NQM4 214 aaKnown RBP23.32■■□□□ 1.32
SMARCD2-212ENST00000613943 PDE8AO60658 829 aa23.32■■□□□ 1.32
SMARCD2-212ENST00000613943 PLCB2Q00722 1185 aa23.32■■□□□ 1.32
SMARCD2-212ENST00000613943 SUSD4Q5VX71 490 aa23.32■■□□□ 1.32
SMARCD2-212ENST00000613943 COL14A1Q05707 1796 aaKnown RBP23.32■■□□□ 1.32
SMARCD2-212ENST00000613943 NUTM2BA6NNL0 878 aaPredicted RBP23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 NUTM2EB1AL46 878 aaPredicted RBP23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 ATP6V1AP38606 617 aa23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 IL6STP40189 918 aaPredicted RBP23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 SLC9C2Q5TAH2 1124 aa23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 NUTM2AQ8IVF1 878 aaPredicted RBP23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 CKAP2LQ8IYA6 745 aa23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 PGBD1Q96JS3 809 aa23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 AGXT2Q9BYV1 514 aa23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 DACT1Q9NYF0 836 aa23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 NOL7Q9UMY1 257 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 PDE8BO95263 885 aa23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 SEC31BQ9NQW1 1179 aa23.31■■□□□ 1.32
SMARCD2-212ENST00000613943 GOLGA6L4A6NEF3 574 aa23.3■■□□□ 1.32
SMARCD2-212ENST00000613943 DDB1Q16531 1140 aa23.3■■□□□ 1.32
SMARCD2-212ENST00000613943 IMMTQ16891 758 aaKnown RBP23.3■■□□□ 1.32
SMARCD2-212ENST00000613943 CCDC102BQ68D86 513 aa23.3■■□□□ 1.32
SMARCD2-212ENST00000613943 INTS5Q6P9B9 1019 aaKnown RBP23.3■■□□□ 1.32
SMARCD2-212ENST00000613943 ELP1O95163 1332 aa23.3■■□□□ 1.32
SMARCD2-212ENST00000613943 LETM1O95202 739 aaPredicted RBP23.3■■□□□ 1.32
SMARCD2-212ENST00000613943 ZNF34Q8IZ26 560 aa23.3■■□□□ 1.32
SMARCD2-212ENST00000613943 SCAND2PQ9GZW5 306 aaPredicted RBP23.3■■□□□ 1.32
SMARCD2-212ENST00000613943 PTMAP06454 111 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-212ENST00000613943 ZFYP08048 801 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-212ENST00000613943 CRKLP46109 303 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-212ENST00000613943 NWD2Q9ULI1 1742 aa23.29■■□□□ 1.32
SMARCD2-212ENST00000613943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-212ENST00000613943 ITPK1Q13572 414 aa23.28■■□□□ 1.32
SMARCD2-212ENST00000613943 MARCH10Q8NA82 808 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-212ENST00000613943 TAOK2Q9UL54 1235 aa23.28■■□□□ 1.32
SMARCD2-212ENST00000613943 WWC3Q9ULE0 1092 aa23.28■■□□□ 1.32
SMARCD2-212ENST00000613943 NR1I2O75469 434 aa23.28■■□□□ 1.32
SMARCD2-212ENST00000613943 LRRFIP1Q32MZ4 808 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-212ENST00000613943 OTUD7BQ6GQQ9 843 aa23.28■■□□□ 1.32
SMARCD2-212ENST00000613943 DOT1LQ8TEK3 1739 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 ERVV-1B6SEH8 477 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 PRC1O43663 620 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 ADD2P35612 726 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 EIF5P55010 431 aaKnown RBP23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 BICD2Q8TD16 824 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 ZNF830Q96NB3 372 aaPredicted RBP23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 NUP62CLQ9H1M0 184 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 SPEF2Q9C093 1822 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 AP5Z1O43299 807 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 ADCY5O95622 1261 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms