RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 BAG3O95817 575 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 ZNF853P0CG23 659 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 MATR3P43243 847 aaKnown RBP eCLIP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 TDRD12Q587J7 1177 aaKnown RBP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 CATIPQ7Z7H3 387 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 DZIP1Q86YF9 867 aaKnown RBP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 SEPT11Q9NVA2 429 aaKnown RBP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 CWC25Q9NXE8 425 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 PUF60Q9UHX1 559 aaKnown RBP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 TRPM2O94759 1503 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 IDH1O75874 414 aaKnown RBP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 NEDD9Q14511 834 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 ATL3Q6DD88 541 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 TMTC2Q8N394 836 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 CCDC77Q9BR77 488 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 MKNK2Q9HBH9 465 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 RMND1Q9NWS8 449 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 MTMR7Q9Y216 660 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 SLC12A7Q9Y666 1083 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 WDR7Q9Y4E6 1490 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 EXOC5O00471 708 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 N4BP3O15049 544 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 ALDH1L1O75891 902 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 ZNF569Q5MCW4 686 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 SEPT14Q6ZU15 432 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 CROCCP2Q86T23 111 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 ZSCAN29Q8IWY8 852 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 RPGRQ92834 1020 aaKnown RBP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 MED4Q9NPJ6 270 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 UHRF1BP1Q6BDS2 1440 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 KDM2BQ8NHM5 1336 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 A0A087WUV0 522 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-211ENST00000613795 PPFIA4O75335 1185 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 MCTP2Q6DN12 878 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 ZNF365Q70YC5 407 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 SMC6Q96SB8 1091 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 TSGA10Q9BZW7 698 aa7.79□□□□□ -1.16
CLCN3-211ENST00000613795 CCDC40Q4G0X9 1142 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 CRACR2BQ8N4Y2 399 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 CARD6Q9BX69 1037 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 MSH6P52701 1360 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 SSBP05455 408 aaKnown RBP eCLIP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 ERCC3P19447 782 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 SYKP43405 635 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 PDE4BQ07343 736 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 ZKSCAN8Q15776 578 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 KIAA0753Q2KHM9 967 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 ECHDC1Q9NTX5 307 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 TTF2Q9UNY4 1162 aaKnown RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 NUTM2BA6NNL0 878 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 NUTM2EB1AL46 878 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 SNRPA1P09661 255 aaKnown RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 HOOK3Q86VS8 718 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 NUTM2AQ8IVF1 878 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 STMN2Q93045 179 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 NAPGQ99747 312 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 BAG1Q99933 345 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 BABAM1Q9NWV8 329 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 CAPN7Q9Y6W3 813 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 KIAA0556O60303 1618 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 EFCAB8A8MWE9 144 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 CETN1Q12798 172 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 CCDC174Q6PII3 467 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 FAM71BQ8TC56 605 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 IL1RAPL2Q9NP60 686 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 LMBRD1Q9NUN5 540 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 RNF216Q9NWF9 866 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 ADAMTS12P58397 1594 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 PPIP5K1Q6PFW1 1433 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 A0A1W2PRG0 241 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 SMARCA5O60264 1052 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 PRPHP41219 470 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 MTIF2P46199 727 aaKnown RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 TNNC1P63316 161 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 DNM1Q05193 864 aaKnown RBP7.78□□□□□ -1.16
CLCN3-211ENST00000613795 KIF5AQ12840 1032 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 MAP7Q14244 749 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 CNGA4Q8IV77 575 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 NEK11Q8NG66 645 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 CNNM2Q9H8M5 875 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 EXOC6BQ9Y2D4 811 aa7.78□□□□□ -1.16
CLCN3-211ENST00000613795 KRT28Q7Z3Y7 464 aa7.77□□□□□ -1.16
CLCN3-211ENST00000613795 TACO1Q9BSH4 297 aaKnown RBP7.77□□□□□ -1.16
CLCN3-211ENST00000613795 KRT23Q9C075 422 aa7.77□□□□□ -1.16
CLCN3-211ENST00000613795 IFNKQ9P0W0 207 aa7.77□□□□□ -1.16
CLCN3-211ENST00000613795 POLR3AO14802 1390 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-211ENST00000613795 GOLGA6BA6NDN3 693 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 MYO1BO43795 1136 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 ALDH3A1P30838 453 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 CCDC96Q2M329 555 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 MICAL1Q8TDZ2 1067 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 CABS1Q96KC9 395 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 RPGRIP1Q96KN7 1286 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 SELENOSQ9BQE4 189 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 ZHX3Q9H4I2 956 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 RTL1A6NKG5 1358 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 ATP5DP30049 168 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 ACTN2P35609 894 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 FLIIQ13045 1269 aa7.77□□□□□ -1.17
CLCN3-211ENST00000613795 SNCBQ16143 134 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms