RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 FIBPO43427 364 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 TAF5LO75529 589 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 CSF1RP07333 972 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 TPM2P07951 284 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 PDCP20941 246 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 IL15P40933 162 aaPredicted RBP17.44■□□□□ 0.38
CDH1-213ENST00000612417 LRRC24Q50LG9 513 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 SUSD4Q5VX71 490 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 ATG9AQ7Z3C6 839 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
CDH1-213ENST00000612417 UTP14AQ9BVJ6 771 aaKnown RBP17.44■□□□□ 0.38
CDH1-213ENST00000612417 CTSWP56202 376 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 KRT27Q7Z3Y8 459 aa17.44■□□□□ 0.38
CDH1-213ENST00000612417 BCL11BQ9C0K0 894 aaPredicted RBP17.44■□□□□ 0.38
CDH1-213ENST00000612417 GNPATO15228 680 aa17.43■□□□□ 0.38
CDH1-213ENST00000612417 PDE8AO60658 829 aa17.43■□□□□ 0.38
CDH1-213ENST00000612417 DNM1Q05193 864 aaKnown RBP17.43■□□□□ 0.38
CDH1-213ENST00000612417 KRT32Q14532 448 aa17.43■□□□□ 0.38
CDH1-213ENST00000612417 RC3H1Q5TC82 1133 aaKnown RBP17.43■□□□□ 0.38
CDH1-213ENST00000612417 SMIM5Q71RC9 77 aa17.43■□□□□ 0.38
CDH1-213ENST00000612417 NECAB1Q8N987 351 aa17.43■□□□□ 0.38
CDH1-213ENST00000612417 TTLL11Q8NHH1 800 aa17.43■□□□□ 0.38
CDH1-213ENST00000612417 BRWD3Q6RI45 1802 aa17.43■□□□□ 0.38
CDH1-213ENST00000612417 TOB2Q14106 344 aaPredicted RBP17.43■□□□□ 0.38
CDH1-213ENST00000612417 TICAM2Q86XR7 235 aa17.43■□□□□ 0.38
CDH1-213ENST00000612417 NEUROD6Q96NK8 337 aa17.43■□□□□ 0.38
CDH1-213ENST00000612417 PUS3Q9BZE2 481 aaKnown RBP17.43■□□□□ 0.38
CDH1-213ENST00000612417 SH3TC1Q8TE82 1336 aa17.42■□□□□ 0.38
CDH1-213ENST00000612417 EP400Q96L91 3159 aa17.42■□□□□ 0.38
CDH1-213ENST00000612417 CIAO1O76071 339 aa17.42■□□□□ 0.38
CDH1-213ENST00000612417 COL9A3Q14050 684 aaPredicted RBP17.42■□□□□ 0.38
CDH1-213ENST00000612417 FAM196AQ6ZSG2 479 aa17.42■□□□□ 0.38
CDH1-213ENST00000612417 HAUS7Q99871 368 aa17.42■□□□□ 0.38
CDH1-213ENST00000612417 FUCA2Q9BTY2 467 aa17.42■□□□□ 0.38
CDH1-213ENST00000612417 GREM2Q9H772 168 aa17.42■□□□□ 0.38
CDH1-213ENST00000612417 ELP1O95163 1332 aa17.42■□□□□ 0.38
CDH1-213ENST00000612417 ANKRD18BA2A2Z9 1011 aa17.41■□□□□ 0.38
CDH1-213ENST00000612417 VPS37CA5D8V6 355 aaPredicted RBP17.41■□□□□ 0.38
CDH1-213ENST00000612417 RPS6KA4O75676 772 aa17.41■□□□□ 0.38
CDH1-213ENST00000612417 HCLS1P14317 486 aaPredicted RBP17.41■□□□□ 0.38
CDH1-213ENST00000612417 ITGA6P23229 1130 aa17.41■□□□□ 0.38
CDH1-213ENST00000612417 LARP1BQ659C4 914 aaKnown RBP17.41■□□□□ 0.38
CDH1-213ENST00000612417 ZNF772Q68DY9 489 aaPredicted RBP17.41■□□□□ 0.38
CDH1-213ENST00000612417 CEP126Q9P2H0 1117 aa17.41■□□□□ 0.38
CDH1-213ENST00000612417 TAF6LQ9Y6J9 622 aa17.41■□□□□ 0.38
CDH1-213ENST00000612417 ZNF609O15014 1411 aa17.41■□□□□ 0.38
CDH1-213ENST00000612417 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
CDH1-213ENST00000612417 RTCBQ9Y3I0 505 aaKnown RBP17.41■□□□□ 0.38
CDH1-213ENST00000612417 LAMA4Q16363 1823 aa17.41■□□□□ 0.38
CDH1-213ENST00000612417 LY75O60449 1722 aa17.4■□□□□ 0.38
CDH1-213ENST00000612417 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
CDH1-213ENST00000612417 BICDL1Q6ZP65 573 aa17.4■□□□□ 0.38
CDH1-213ENST00000612417 EDC3Q96F86 508 aaKnown RBP17.4■□□□□ 0.38
CDH1-213ENST00000612417 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
CDH1-213ENST00000612417 ZPR1O75312 459 aa17.4■□□□□ 0.38
CDH1-213ENST00000612417 KRT85P78386 507 aa17.4■□□□□ 0.38
CDH1-213ENST00000612417 AK7Q96M32 723 aa17.4■□□□□ 0.38
CDH1-213ENST00000612417 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
CDH1-213ENST00000612417 TAF1LQ8IZX4 1826 aa17.39■□□□□ 0.38
CDH1-213ENST00000612417 BCORQ6W2J9 1755 aa17.39■□□□□ 0.37
CDH1-213ENST00000612417 TRIM37O94972 964 aa17.39■□□□□ 0.37
CDH1-213ENST00000612417 TIMM10P62072 90 aa17.39■□□□□ 0.37
CDH1-213ENST00000612417 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
CDH1-213ENST00000612417 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.37
CDH1-213ENST00000612417 CDC37L1Q7L3B6 337 aa17.39■□□□□ 0.37
CDH1-213ENST00000612417 FBXO3Q9UK99 471 aa17.39■□□□□ 0.37
CDH1-213ENST00000612417 HSP90B1P14625 803 aaKnown RBP17.38■□□□□ 0.37
CDH1-213ENST00000612417 GPR108Q9NPR9 543 aa17.38■□□□□ 0.37
CDH1-213ENST00000612417 CNNM1Q9NRU3 951 aa17.38■□□□□ 0.37
CDH1-213ENST00000612417 NTSR2O95665 410 aa17.38■□□□□ 0.37
CDH1-213ENST00000612417 MCMDC2Q4G0Z9 681 aa17.38■□□□□ 0.37
CDH1-213ENST00000612417 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
CDH1-213ENST00000612417 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
CDH1-213ENST00000612417 TTC6Q86TZ1 520 aa17.37■□□□□ 0.37
CDH1-213ENST00000612417 KBTBD3Q8NAB2 608 aa17.37■□□□□ 0.37
CDH1-213ENST00000612417 NEK1Q96PY6 1258 aa17.37■□□□□ 0.37
CDH1-213ENST00000612417 A0A1B0GUL7 405 aa17.36■□□□□ 0.37
CDH1-213ENST00000612417 METTL24Q5JXM2 366 aa17.36■□□□□ 0.37
CDH1-213ENST00000612417 GTF3C6Q969F1 213 aa17.36■□□□□ 0.37
CDH1-213ENST00000612417 TCEANC2Q96MN5 208 aa17.36■□□□□ 0.37
CDH1-213ENST00000612417 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
CDH1-213ENST00000612417 MYH15Q9Y2K3 1946 aa17.36■□□□□ 0.37
CDH1-213ENST00000612417 GTF2E1P29083 439 aaPredicted RBP17.36■□□□□ 0.37
CDH1-213ENST00000612417 TBC1D9BQ66K14 1250 aa17.36■□□□□ 0.37
CDH1-213ENST00000612417 DNAJC2Q99543 621 aaKnown RBP17.36■□□□□ 0.37
CDH1-213ENST00000612417 SCAND2PQ9GZW5 306 aaPredicted RBP17.36■□□□□ 0.37
CDH1-213ENST00000612417 PTMAP06454 111 aaKnown RBP17.35■□□□□ 0.37
CDH1-213ENST00000612417 GORABQ5T7V8 394 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 ARHGEF1Q92888 912 aaKnown RBP17.35■□□□□ 0.37
CDH1-213ENST00000612417 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 USP25Q9UHP3 1055 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 C4BP0C0L5 1744 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 DTNBO60941 627 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 RFC4P35249 363 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 TRAPPC3LQ5T215 181 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 GIMAP6Q6P9H5 292 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
CDH1-213ENST00000612417 RIPOR2Q9Y4F9 1068 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms