RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ZAP70P43403 619 aa14.85□□□□□ -0.03
CBWD1-220ENST00000612045 UBE4AQ14139 1066 aa14.85□□□□□ -0.03
CBWD1-220ENST00000612045 PI16Q6UXB8 463 aa14.85□□□□□ -0.03
CBWD1-220ENST00000612045 RPGRQ92834 1020 aaKnown RBP14.85□□□□□ -0.03
CBWD1-220ENST00000612045 MED23Q9ULK4 1368 aa14.85□□□□□ -0.03
CBWD1-220ENST00000612045 KLRG2A4D1S0 409 aaPredicted RBP14.85□□□□□ -0.03
CBWD1-220ENST00000612045 DEFB132Q7Z7B7 95 aa14.85□□□□□ -0.03
CBWD1-220ENST00000612045 TBC1D2Q9BYX2 928 aa14.85□□□□□ -0.03
CBWD1-220ENST00000612045 ANKRD2Q9GZV1 360 aa14.85□□□□□ -0.03
CBWD1-220ENST00000612045 NRXN2Q9P2S2 1712 aa14.84□□□□□ -0.03
CBWD1-220ENST00000612045 CHGBP05060 677 aa14.84□□□□□ -0.03
CBWD1-220ENST00000612045 MMP10P09238 476 aa14.84□□□□□ -0.03
CBWD1-220ENST00000612045 BCAMP50895 628 aa14.84□□□□□ -0.03
CBWD1-220ENST00000612045 RABEP1Q15276 862 aa14.84□□□□□ -0.03
CBWD1-220ENST00000612045 WTIPA6NIX2 430 aaPredicted RBP14.83□□□□□ -0.04
CBWD1-220ENST00000612045 HSPA4P34932 840 aa14.83□□□□□ -0.04
CBWD1-220ENST00000612045 ANAPC15P60006 121 aa14.83□□□□□ -0.04
CBWD1-220ENST00000612045 PTH1RQ03431 593 aa14.83□□□□□ -0.04
CBWD1-220ENST00000612045 MSL1Q68DK7 614 aa14.83□□□□□ -0.04
CBWD1-220ENST00000612045 SNX21Q969T3 373 aa14.83□□□□□ -0.04
CBWD1-220ENST00000612045 RBM17Q96I25 401 aaKnown RBP14.83□□□□□ -0.04
CBWD1-220ENST00000612045 BRIP1Q9BX63 1249 aa14.83□□□□□ -0.04
CBWD1-220ENST00000612045 PALD1Q9ULE6 856 aa14.83□□□□□ -0.04
CBWD1-220ENST00000612045 PARP3Q9Y6F1 533 aa14.83□□□□□ -0.04
CBWD1-220ENST00000612045 CCDC171Q6TFL3 1326 aa14.83□□□□□ -0.04
CBWD1-220ENST00000612045 RNF113AO15541 343 aaKnown RBP14.82□□□□□ -0.04
CBWD1-220ENST00000612045 CYP2E1P05181 493 aaPredicted RBP14.82□□□□□ -0.04
CBWD1-220ENST00000612045 HOXA10P31260 410 aaPredicted RBP14.82□□□□□ -0.04
CBWD1-220ENST00000612045 LRRFIP1Q32MZ4 808 aaKnown RBP14.82□□□□□ -0.04
CBWD1-220ENST00000612045 MCMDC2Q4G0Z9 681 aa14.82□□□□□ -0.04
CBWD1-220ENST00000612045 ZNF589Q86UQ0 364 aaPredicted RBP14.82□□□□□ -0.04
CBWD1-220ENST00000612045 HMG20BQ9P0W2 317 aa14.82□□□□□ -0.04
CBWD1-220ENST00000612045 QSER1Q2KHR3 1735 aa14.82□□□□□ -0.04
CBWD1-220ENST00000612045 KCNJ4P48050 445 aa14.82□□□□□ -0.04
CBWD1-220ENST00000612045 RASGRF1Q13972 1273 aa14.82□□□□□ -0.04
CBWD1-220ENST00000612045 TTF1Q15361 905 aaPredicted RBP14.82□□□□□ -0.04
CBWD1-220ENST00000612045 ZMYM1Q5SVZ6 1142 aa14.82□□□□□ -0.04
CBWD1-220ENST00000612045 SPATA5Q8NB90 893 aa14.82□□□□□ -0.04
CBWD1-220ENST00000612045 IL17RAQ96F46 866 aa14.82□□□□□ -0.04
CBWD1-220ENST00000612045 SEC62Q99442 399 aaKnown RBP14.82□□□□□ -0.04
CBWD1-220ENST00000612045 HELLSQ9NRZ9 838 aa14.82□□□□□ -0.04
CBWD1-220ENST00000612045 HSCBQ8IWL3 235 aa14.81□□□□□ -0.04
CBWD1-220ENST00000612045 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
CBWD1-220ENST00000612045 ZNF804BA4D1E1 1349 aa14.81□□□□□ -0.04
CBWD1-220ENST00000612045 ANKRD31Q8N7Z5 1873 aa14.81□□□□□ -0.04
CBWD1-220ENST00000612045 ZFYP08048 801 aaPredicted RBP14.8□□□□□ -0.04
CBWD1-220ENST00000612045 GYG1P46976 350 aa14.8□□□□□ -0.04
CBWD1-220ENST00000612045 SLFNL1Q499Z3 407 aa14.8□□□□□ -0.04
CBWD1-220ENST00000612045 CRAMP1Q96RY5 1269 aa14.8□□□□□ -0.04
CBWD1-220ENST00000612045 BBOX1O75936 387 aa14.8□□□□□ -0.04
CBWD1-220ENST00000612045 CAVIN4Q5BKX8 364 aa14.8□□□□□ -0.04
CBWD1-220ENST00000612045 CCDC129Q6ZRS4 1044 aa14.8□□□□□ -0.04
CBWD1-220ENST00000612045 FAM84BQ96KN1 310 aaPredicted RBP14.8□□□□□ -0.04
CBWD1-220ENST00000612045 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.8□□□□□ -0.04
CBWD1-220ENST00000612045 PIH1D3Q9NQM4 214 aaKnown RBP14.8□□□□□ -0.04
CBWD1-220ENST00000612045 ANKIB1Q9P2G1 1089 aa14.8□□□□□ -0.04
CBWD1-220ENST00000612045 CD2BP2O95400 341 aaKnown RBP14.79□□□□□ -0.04
CBWD1-220ENST00000612045 ZSCAN25Q6NSZ9 544 aa14.79□□□□□ -0.04
CBWD1-220ENST00000612045 FBXO33Q7Z6M2 555 aa14.79□□□□□ -0.04
CBWD1-220ENST00000612045 SLC51AQ86UW1 340 aa14.79□□□□□ -0.04
CBWD1-220ENST00000612045 CCDC125Q86Z20 511 aa14.79□□□□□ -0.04
CBWD1-220ENST00000612045 GNL3LQ9NVN8 582 aaKnown RBP14.79□□□□□ -0.04
CBWD1-220ENST00000612045 RBM8AQ9Y5S9 174 aaKnown RBP14.79□□□□□ -0.04
CBWD1-220ENST00000612045 XDHP47989 1333 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 KLRK1P26718 216 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 PDE6BP35913 854 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 NECTIN1Q15223 517 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 VPS37DQ86XT2 251 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 LEMD3Q9Y2U8 911 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 SNX14Q9Y5W7 946 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 MYH7P12883 1935 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 MAST3O60307 1309 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 IDH1O75874 414 aaKnown RBP14.78□□□□□ -0.04
CBWD1-220ENST00000612045 SRGNP10124 158 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 WASHC4Q2M389 1173 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 PRPF40BQ6NWY9 871 aaKnown RBP14.78□□□□□ -0.04
CBWD1-220ENST00000612045 RASEFQ8IZ41 740 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 KCNB2Q92953 911 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 OSBP2Q969R2 916 aa14.78□□□□□ -0.04
CBWD1-220ENST00000612045 IRS2Q9Y4H2 1338 aa14.77□□□□□ -0.05
CBWD1-220ENST00000612045 M0R2C6 588 aa14.77□□□□□ -0.05
CBWD1-220ENST00000612045 ST18O60284 1047 aa14.77□□□□□ -0.05
CBWD1-220ENST00000612045 NPR1P16066 1061 aa14.77□□□□□ -0.05
CBWD1-220ENST00000612045 ADD2P35612 726 aa14.77□□□□□ -0.05
CBWD1-220ENST00000612045 SLC9C2Q5TAH2 1124 aa14.77□□□□□ -0.05
CBWD1-220ENST00000612045 ERICH6Q7L0X2 663 aa14.77□□□□□ -0.05
CBWD1-220ENST00000612045 APPBP2Q92624 585 aa14.77□□□□□ -0.05
CBWD1-220ENST00000612045 IQSEC3Q9UPP2 1182 aaPredicted RBP14.77□□□□□ -0.05
CBWD1-220ENST00000612045 MYO5AQ9Y4I1 1855 aaKnown RBP14.77□□□□□ -0.05
CBWD1-220ENST00000612045 HIBADHP31937 336 aaKnown RBP14.76□□□□□ -0.05
CBWD1-220ENST00000612045 GPSM2P81274 684 aa14.76□□□□□ -0.05
CBWD1-220ENST00000612045 UBE3CQ15386 1083 aa14.76□□□□□ -0.05
CBWD1-220ENST00000612045 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
CBWD1-220ENST00000612045 TMC4Q7Z404 712 aa14.76□□□□□ -0.05
CBWD1-220ENST00000612045 PDGFDQ9GZP0 370 aaPredicted RBP14.76□□□□□ -0.05
CBWD1-220ENST00000612045 NEK4P51957 841 aa14.76□□□□□ -0.05
CBWD1-220ENST00000612045 WWC3Q9ULE0 1092 aa14.76□□□□□ -0.05
CBWD1-220ENST00000612045 DENND2AQ9ULE3 1009 aa14.76□□□□□ -0.05
CBWD1-220ENST00000612045 NSFL1CQ9UNZ2 370 aaKnown RBP14.76□□□□□ -0.05
CBWD1-220ENST00000612045 DOCK2Q92608 1830 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms