RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 HSP90AA4PQ58FG1 418 aa12.83□□□□□ -0.35
CDH4-202ENST00000611855 NBPF11Q86T75 865 aa12.83□□□□□ -0.35
CDH4-202ENST00000611855 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
CDH4-202ENST00000611855 GPS2Q13227 327 aa12.83□□□□□ -0.36
CDH4-202ENST00000611855 ZRSR1Q15695 479 aaKnown RBP12.83□□□□□ -0.36
CDH4-202ENST00000611855 KSR2Q6VAB6 950 aa12.83□□□□□ -0.36
CDH4-202ENST00000611855 GPHNQ9NQX3 736 aaPredicted RBP12.83□□□□□ -0.36
CDH4-202ENST00000611855 LMOD1P29536 600 aaPredicted RBP12.83□□□□□ -0.36
CDH4-202ENST00000611855 CDC25BP30305 580 aa12.83□□□□□ -0.36
CDH4-202ENST00000611855 MTX1Q13505 466 aa12.83□□□□□ -0.36
CDH4-202ENST00000611855 CARD6Q9BX69 1037 aa12.83□□□□□ -0.36
CDH4-202ENST00000611855 ANO10Q9NW15 660 aa12.83□□□□□ -0.36
CDH4-202ENST00000611855 MED23Q9ULK4 1368 aa12.83□□□□□ -0.36
CDH4-202ENST00000611855 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 MYO1CO00159 1063 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 ARMCX5Q6P1M9 558 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 SARM1Q6SZW1 724 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 RIC3Q7Z5B4 369 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 TXLNBQ8N3L3 684 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
CDH4-202ENST00000611855 PPP1R13BQ96KQ4 1090 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 DBNLQ9UJU6 430 aaKnown RBP12.82□□□□□ -0.36
CDH4-202ENST00000611855 SLC39A6Q13433 755 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 SF3A1Q15459 793 aaKnown RBP12.82□□□□□ -0.36
CDH4-202ENST00000611855 SKIDA1Q1XH10 827 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 NDUFA8P51970 172 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 TFCP2Q12800 502 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 SIRT1Q96EB6 747 aa12.82□□□□□ -0.36
CDH4-202ENST00000611855 SFPQP23246 707 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDH4-202ENST00000611855 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
CDH4-202ENST00000611855 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
CDH4-202ENST00000611855 PCDHA7Q9UN72 937 aa12.81□□□□□ -0.36
CDH4-202ENST00000611855 TECPR2O15040 1411 aa12.81□□□□□ -0.36
CDH4-202ENST00000611855 GTF2A1P52655 376 aaPredicted RBP12.81□□□□□ -0.36
CDH4-202ENST00000611855 ZSCAN16Q9H4T2 348 aaPredicted RBP12.81□□□□□ -0.36
CDH4-202ENST00000611855 ZSWIM4Q9H7M6 989 aa12.81□□□□□ -0.36
CDH4-202ENST00000611855 ANKRD65E5RJM6 399 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 ATP1A3P13637 1013 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 HMG20BQ9P0W2 317 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 RCOR1Q9UKL0 485 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 KIF2AO00139 706 aaPredicted RBP12.8□□□□□ -0.36
CDH4-202ENST00000611855 LMOD2Q6P5Q4 547 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
CDH4-202ENST00000611855 MYD88Q99836 296 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 RGPD8O14715 1765 aaPredicted RBP12.8□□□□□ -0.36
CDH4-202ENST00000611855 NRDCO43847 1150 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 GIGYF1O75420 1035 aaPredicted RBP12.8□□□□□ -0.36
CDH4-202ENST00000611855 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 SMC1AQ14683 1233 aaKnown RBP12.8□□□□□ -0.36
CDH4-202ENST00000611855 ENGASEQ8NFI3 743 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 CLIC4Q9Y696 253 aa12.8□□□□□ -0.36
CDH4-202ENST00000611855 ZNF609O15014 1411 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 NALCNQ8IZF0 1738 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 ALDH1L1O75891 902 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 EVCP57679 992 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 CREBRFQ8IUR6 639 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 ORC3Q9UBD5 711 aaPredicted RBP12.79□□□□□ -0.36
CDH4-202ENST00000611855 PTPRUQ92729 1446 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 TMEM2Q9UHN6 1383 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 STK38Q15208 465 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 LINS1Q8NG48 757 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 CRYBG1Q9Y4K1 1723 aa12.79□□□□□ -0.36
CDH4-202ENST00000611855 ATP5J2-PTCD1G3V325 749 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 CTAGE5O15320 804 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 DHX16O60231 1041 aaKnown RBP12.78□□□□□ -0.36
CDH4-202ENST00000611855 PTCD1O75127 700 aaKnown RBP12.78□□□□□ -0.36
CDH4-202ENST00000611855 SASH3O75995 380 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 HAND2P61296 217 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 KRT32Q14532 448 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 GOLIM4O00461 696 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 CAVIN2O95810 425 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 MRPS27Q92552 414 aaKnown RBP12.78□□□□□ -0.36
CDH4-202ENST00000611855 LRRC37A3O60309 1634 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 MARCKSP29966 332 aaPredicted RBP12.78□□□□□ -0.36
CDH4-202ENST00000611855 GSDMDP57764 484 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 STK11IPQ8N1F8 1099 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 NAT10Q9H0A0 1025 aaKnown RBP12.78□□□□□ -0.36
CDH4-202ENST00000611855 L2HGDHQ9H9P8 463 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 CWC15Q9P013 229 aaKnown RBP12.78□□□□□ -0.36
CDH4-202ENST00000611855 CEMIPQ8WUJ3 1361 aa12.78□□□□□ -0.36
CDH4-202ENST00000611855 HSP90AB3PQ58FF7 597 aa12.77□□□□□ -0.36
CDH4-202ENST00000611855 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.36
CDH4-202ENST00000611855 UBE3BQ7Z3V4 1068 aa12.77□□□□□ -0.36
CDH4-202ENST00000611855 GPATCH11Q8N954 259 aa12.77□□□□□ -0.36
CDH4-202ENST00000611855 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.36
CDH4-202ENST00000611855 BABAM1Q9NWV8 329 aa12.77□□□□□ -0.36
CDH4-202ENST00000611855 NWD1Q149M9 1564 aa12.77□□□□□ -0.37
CDH4-202ENST00000611855 PFKFB2O60825 505 aa12.77□□□□□ -0.37
CDH4-202ENST00000611855 MCMDC2Q4G0Z9 681 aa12.77□□□□□ -0.37
CDH4-202ENST00000611855 FMR1NBQ8N0W7 255 aaPredicted RBP12.77□□□□□ -0.37
CDH4-202ENST00000611855 SMARCC2Q8TAQ2 1214 aa12.77□□□□□ -0.37
CDH4-202ENST00000611855 DPF2Q92785 391 aa12.77□□□□□ -0.37
CDH4-202ENST00000611855 FANCGO15287 622 aa12.77□□□□□ -0.37
CDH4-202ENST00000611855 ZRANB2O95218 330 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDH4-202ENST00000611855 CASQ1P31415 396 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms