RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
SH3D19-212ENST00000604440 U2SURPO15042 1029 aaKnown RBP11.79□□□□□ -0.52
SH3D19-212ENST00000604440 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
SH3D19-212ENST00000604440 LRRN4Q8WUT4 740 aa11.78□□□□□ -0.52
SH3D19-212ENST00000604440 SYTL4Q96C24 671 aaPredicted RBP11.78□□□□□ -0.52
SH3D19-212ENST00000604440 CFAP53Q96M91 514 aa11.78□□□□□ -0.52
SH3D19-212ENST00000604440 TSEN34Q9BSV6 310 aaKnown RBP11.78□□□□□ -0.52
SH3D19-212ENST00000604440 PCDH11XQ9BZA7 1347 aa11.78□□□□□ -0.52
SH3D19-212ENST00000604440 PCDH11YQ9BZA8 1340 aa11.78□□□□□ -0.52
SH3D19-212ENST00000604440 FLAD1Q8NFF5 587 aa11.77□□□□□ -0.53
SH3D19-212ENST00000604440 CYP27B1O15528 508 aa11.76□□□□□ -0.53
SH3D19-212ENST00000604440 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
SH3D19-212ENST00000604440 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
SH3D19-212ENST00000604440 FKBPLQ9UIM3 349 aa11.76□□□□□ -0.53
SH3D19-212ENST00000604440 SPG7Q9UQ90 795 aa11.76□□□□□ -0.53
SH3D19-212ENST00000604440 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
SH3D19-212ENST00000604440 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
SH3D19-212ENST00000604440 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
SH3D19-212ENST00000604440 PPP1R26Q5T8A7 1209 aaPredicted RBP11.75□□□□□ -0.53
SH3D19-212ENST00000604440 ARFGEF1Q9Y6D6 1849 aa11.74□□□□□ -0.53
SH3D19-212ENST00000604440 RALBP1Q15311 655 aa11.74□□□□□ -0.53
SH3D19-212ENST00000604440 ZNF530Q6P9A1 599 aaPredicted RBP11.74□□□□□ -0.53
SH3D19-212ENST00000604440 AMIGO3Q86WK7 504 aa11.74□□□□□ -0.53
SH3D19-212ENST00000604440 ARHGAP9Q9BRR9 750 aa11.74□□□□□ -0.53
SH3D19-212ENST00000604440 KDRP35968 1356 aa11.74□□□□□ -0.53
SH3D19-212ENST00000604440 PXDNLA1KZ92 1463 aa11.74□□□□□ -0.53
SH3D19-212ENST00000604440 N4BP2Q86UW6 1770 aaPredicted RBP11.74□□□□□ -0.53
SH3D19-212ENST00000604440 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
SH3D19-212ENST00000604440 PHKG2P15735 406 aa11.73□□□□□ -0.53
SH3D19-212ENST00000604440 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
SH3D19-212ENST00000604440 SKIV2LQ15477 1246 aaKnown RBP11.73□□□□□ -0.53
SH3D19-212ENST00000604440 PLEKHO1Q53GL0 409 aaPredicted RBP11.73□□□□□ -0.53
SH3D19-212ENST00000604440 SH3D19Q5HYK7 790 aa11.73□□□□□ -0.53
SH3D19-212ENST00000604440 Q6ZVU0 165 aa11.73□□□□□ -0.53
SH3D19-212ENST00000604440 DNAJC5GQ8N7S2 189 aa11.73□□□□□ -0.53
SH3D19-212ENST00000604440 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
SH3D19-212ENST00000604440 MYBBP1AQ9BQG0 1328 aaKnown RBP11.73□□□□□ -0.53
SH3D19-212ENST00000604440 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.73□□□□□ -0.53
SH3D19-212ENST00000604440 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
SH3D19-212ENST00000604440 ZC3H4Q9UPT8 1303 aaKnown RBP11.72□□□□□ -0.53
SH3D19-212ENST00000604440 TTLL8A6PVC2 850 aa11.72□□□□□ -0.53
SH3D19-212ENST00000604440 CBLBQ13191 982 aa11.72□□□□□ -0.53
SH3D19-212ENST00000604440 NR6A1Q15406 480 aa11.72□□□□□ -0.53
SH3D19-212ENST00000604440 MPRIPQ6WCQ1 1025 aa11.72□□□□□ -0.53
SH3D19-212ENST00000604440 IFNL2Q8IZJ0 200 aa11.72□□□□□ -0.53
SH3D19-212ENST00000604440 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
SH3D19-212ENST00000604440 OCSTAMPQ9BR26 566 aa11.72□□□□□ -0.53
SH3D19-212ENST00000604440 PRKRIP1Q9H875 184 aaPredicted RBP11.72□□□□□ -0.53
SH3D19-212ENST00000604440 PGPEP1Q9NXJ5 209 aa11.72□□□□□ -0.53
SH3D19-212ENST00000604440 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
SH3D19-212ENST00000604440 PPP2R2DQ66LE6 453 aa11.71□□□□□ -0.53
SH3D19-212ENST00000604440 PROCA1Q8NCQ7 364 aaPredicted RBP11.71□□□□□ -0.53
SH3D19-212ENST00000604440 KCTD15Q96SI1 283 aaPredicted RBP11.71□□□□□ -0.53
SH3D19-212ENST00000604440 CDV3Q9UKY7 258 aaKnown RBP11.71□□□□□ -0.53
SH3D19-212ENST00000604440 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
SH3D19-212ENST00000604440 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
SH3D19-212ENST00000604440 C4AP0C0L4 1744 aa11.7□□□□□ -0.54
SH3D19-212ENST00000604440 SSFA2P28290 1259 aa11.7□□□□□ -0.54
SH3D19-212ENST00000604440 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
SH3D19-212ENST00000604440 MTHFSDQ2M296 383 aaKnown RBP11.7□□□□□ -0.54
SH3D19-212ENST00000604440 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.7□□□□□ -0.544e-6■■■□□ 18.2
SH3D19-212ENST00000604440 AMOTQ4VCS5 1084 aa11.7□□□□□ -0.54
SH3D19-212ENST00000604440 C1orf141Q5JVX7 400 aa11.7□□□□□ -0.54
SH3D19-212ENST00000604440 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
SH3D19-212ENST00000604440 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
SH3D19-212ENST00000604440 VIRMAQ69YN4 1812 aaKnown RBP11.7□□□□□ -0.54
SH3D19-212ENST00000604440 SPINT1O43278 529 aa11.69□□□□□ -0.54
SH3D19-212ENST00000604440 TOMM70O94826 608 aa11.69□□□□□ -0.54
SH3D19-212ENST00000604440 PTSQ03393 145 aa11.68□□□□□ -0.54
SH3D19-212ENST00000604440 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
SH3D19-212ENST00000604440 ZBTB33Q86T24 672 aa11.68□□□□□ -0.54
SH3D19-212ENST00000604440 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
SH3D19-212ENST00000604440 FAM117AQ9C073 453 aa11.68□□□□□ -0.54
SH3D19-212ENST00000604440 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
SH3D19-212ENST00000604440 INTS6LQ5JSJ4 861 aaKnown RBP11.67□□□□□ -0.54
SH3D19-212ENST00000604440 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
SH3D19-212ENST00000604440 PIGBQ92521 554 aa11.67□□□□□ -0.54
SH3D19-212ENST00000604440 SMARCC1Q92922 1105 aaPredicted RBP11.67□□□□□ -0.54
SH3D19-212ENST00000604440 DDRGK1Q96HY6 314 aa11.67□□□□□ -0.54
SH3D19-212ENST00000604440 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
SH3D19-212ENST00000604440 PLEKHG2Q9H7P9 1386 aa11.67□□□□□ -0.54
SH3D19-212ENST00000604440 SBF1O95248 1867 aa11.66□□□□□ -0.54
SH3D19-212ENST00000604440 ANP32CO43423 234 aa11.66□□□□□ -0.54
SH3D19-212ENST00000604440 CCDC184Q52MB2 194 aa11.66□□□□□ -0.54
SH3D19-212ENST00000604440 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
SH3D19-212ENST00000604440 DCAF5Q96JK2 942 aa11.66□□□□□ -0.54
SH3D19-212ENST00000604440 LGR6Q9HBX8 967 aa11.66□□□□□ -0.54
SH3D19-212ENST00000604440 HSP90AB1P08238 724 aaKnown RBP11.65□□□□□ -0.54
SH3D19-212ENST00000604440 CABP4P57796 275 aa11.65□□□□□ -0.54
SH3D19-212ENST00000604440 KRT76Q01546 638 aa11.65□□□□□ -0.54
SH3D19-212ENST00000604440 DHX9Q08211 1270 aaKnown RBP11.65□□□□□ -0.54
SH3D19-212ENST00000604440 CCDC146Q8IYE0 955 aa11.65□□□□□ -0.54
SH3D19-212ENST00000604440 GPR161Q8N6U8 529 aaKnown RBP11.65□□□□□ -0.54
SH3D19-212ENST00000604440 LINC00116Q8NCU8 138 aa11.65□□□□□ -0.54
SH3D19-212ENST00000604440 ASAP1Q9ULH1 1129 aa11.65□□□□□ -0.54
SH3D19-212ENST00000604440 GPSM3Q9Y4H4 160 aa11.65□□□□□ -0.54
SH3D19-212ENST00000604440 FIGNL2A6NMB9 653 aa11.64□□□□□ -0.55
SH3D19-212ENST00000604440 TGFB2P61812 414 aa11.64□□□□□ -0.55
SH3D19-212ENST00000604440 PTK2Q05397 1052 aa11.64□□□□□ -0.55
SH3D19-212ENST00000604440 GAS2L2Q8NHY3 880 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms