RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 PRDM11Q9NQV5 511 aa17.02■□□□□ 0.32
SMG9-211ENST00000601170 ATG3Q9NT62 314 aa17.02■□□□□ 0.32
SMG9-211ENST00000601170 M0R2C6 588 aa17.01■□□□□ 0.31
SMG9-211ENST00000601170 KIAA1524Q8TCG1 905 aa17.01■□□□□ 0.31
SMG9-211ENST00000601170 NCOA5Q9HCD5 579 aaKnown RBP17.01■□□□□ 0.31
SMG9-211ENST00000601170 PYCARDQ9ULZ3 195 aa17.01■□□□□ 0.31
SMG9-211ENST00000601170 ADD1P35611 737 aaKnown RBP17.01■□□□□ 0.31
SMG9-211ENST00000601170 CHST3Q7LGC8 479 aa17.01■□□□□ 0.31
SMG9-211ENST00000601170 MYRIPQ8NFW9 859 aa17.01■□□□□ 0.31
SMG9-211ENST00000601170 PRIMPOLQ96LW4 560 aa17.01■□□□□ 0.31
SMG9-211ENST00000601170 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
SMG9-211ENST00000601170 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
SMG9-211ENST00000601170 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
SMG9-211ENST00000601170 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
SMG9-211ENST00000601170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
SMG9-211ENST00000601170 FTOQ9C0B1 505 aaKnown RBP eCLIP17■□□□□ 0.31
SMG9-211ENST00000601170 KIF3AQ9Y496 699 aa17■□□□□ 0.31
SMG9-211ENST00000601170 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
SMG9-211ENST00000601170 TTLL5Q6EMB2 1281 aa17■□□□□ 0.31
SMG9-211ENST00000601170 OSBP2Q969R2 916 aa17■□□□□ 0.31
SMG9-211ENST00000601170 DNAJC25Q9H1X3 360 aa17■□□□□ 0.31
SMG9-211ENST00000601170 CEP126Q9P2H0 1117 aa17■□□□□ 0.31
SMG9-211ENST00000601170 SALL1Q9NSC2 1324 aa17■□□□□ 0.31
SMG9-211ENST00000601170 TNS2Q63HR2 1409 aa16.99■□□□□ 0.31
SMG9-211ENST00000601170 PPFIA3O75145 1194 aa16.99■□□□□ 0.31
SMG9-211ENST00000601170 PDIA3P30101 505 aaKnown RBP16.99■□□□□ 0.31
SMG9-211ENST00000601170 ZNF165P49910 485 aa16.99■□□□□ 0.31
SMG9-211ENST00000601170 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
SMG9-211ENST00000601170 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
SMG9-211ENST00000601170 ISCA1Q9BUE6 129 aa16.99■□□□□ 0.31
SMG9-211ENST00000601170 IL2RBP14784 551 aa16.99■□□□□ 0.31
SMG9-211ENST00000601170 NWD2Q9ULI1 1742 aa16.98■□□□□ 0.31
SMG9-211ENST00000601170 PTGS1P23219 599 aa16.98■□□□□ 0.31
SMG9-211ENST00000601170 CCDC158Q5M9N0 1113 aa16.98■□□□□ 0.31
SMG9-211ENST00000601170 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
SMG9-211ENST00000601170 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
SMG9-211ENST00000601170 ZNF274Q96GC6 653 aaPredicted RBP16.98■□□□□ 0.31
SMG9-211ENST00000601170 USP28Q96RU2 1077 aa16.98■□□□□ 0.31
SMG9-211ENST00000601170 MAP7D2Q96T17 732 aa16.98■□□□□ 0.31
SMG9-211ENST00000601170 RCOR1Q9UKL0 485 aa16.98■□□□□ 0.31
SMG9-211ENST00000601170 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
SMG9-211ENST00000601170 ADORA1P30542 326 aa16.97■□□□□ 0.31
SMG9-211ENST00000601170 GORABQ5T7V8 394 aa16.97■□□□□ 0.31
SMG9-211ENST00000601170 XAGE2Q96GT9 111 aa16.97■□□□□ 0.31
SMG9-211ENST00000601170 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
SMG9-211ENST00000601170 GUCY1B3Q02153 619 aa16.97■□□□□ 0.31
SMG9-211ENST00000601170 TCIRG1Q13488 830 aa16.97■□□□□ 0.31
SMG9-211ENST00000601170 PLA2G4DQ86XP0 818 aa16.97■□□□□ 0.31
SMG9-211ENST00000601170 CCAR1Q8IX12 1150 aaKnown RBP16.97■□□□□ 0.31
SMG9-211ENST00000601170 CCDC85AQ96PX6 553 aaPredicted RBP16.97■□□□□ 0.31
SMG9-211ENST00000601170 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
SMG9-211ENST00000601170 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.31
SMG9-211ENST00000601170 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.31
SMG9-211ENST00000601170 TOGARAM1Q9Y4F4 1720 aa16.96■□□□□ 0.31
SMG9-211ENST00000601170 ZNF75DP51815 510 aa16.96■□□□□ 0.31
SMG9-211ENST00000601170 WASHC4Q2M389 1173 aa16.96■□□□□ 0.31
SMG9-211ENST00000601170 LRRFIP1Q32MZ4 808 aaKnown RBP16.96■□□□□ 0.31
SMG9-211ENST00000601170 CCDC186Q7Z3E2 898 aa16.96■□□□□ 0.31
SMG9-211ENST00000601170 ZNF396Q96N95 335 aaPredicted RBP16.96■□□□□ 0.31
SMG9-211ENST00000601170 GOLPH3LQ9H4A5 285 aa16.96■□□□□ 0.31
SMG9-211ENST00000601170 FOXP2O15409 715 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 HAND2P61296 217 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 CAVIN2O95810 425 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 SCARF1Q14162 830 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 ATL3Q6DD88 541 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.95■□□□□ 0.3
SMG9-211ENST00000601170 ILDR1Q86SU0 546 aaPredicted RBP16.95■□□□□ 0.3
SMG9-211ENST00000601170 FBXL16Q8N461 479 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 CARD10Q9BWT7 1032 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 GPHNQ9NQX3 736 aaPredicted RBP16.95■□□□□ 0.3
SMG9-211ENST00000601170 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 FBXO3Q9UK99 471 aa16.95■□□□□ 0.3
SMG9-211ENST00000601170 CTAGE5O15320 804 aa16.94■□□□□ 0.3
SMG9-211ENST00000601170 ZFYP08048 801 aaPredicted RBP16.94■□□□□ 0.3
SMG9-211ENST00000601170 FDPSP14324 419 aaKnown RBP16.94■□□□□ 0.3
SMG9-211ENST00000601170 IMMTQ16891 758 aaKnown RBP16.94■□□□□ 0.3
SMG9-211ENST00000601170 TAF7LQ5H9L4 462 aa16.94■□□□□ 0.3
SMG9-211ENST00000601170 CCDC73Q6ZRK6 1079 aa16.94■□□□□ 0.3
SMG9-211ENST00000601170 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMG9-211ENST00000601170 EVCP57679 992 aa16.94■□□□□ 0.3
SMG9-211ENST00000601170 SNW1Q13573 536 aaKnown RBP16.94■□□□□ 0.3
SMG9-211ENST00000601170 HSP90AB3PQ58FF7 597 aa16.94■□□□□ 0.3
SMG9-211ENST00000601170 CHMP4CQ96CF2 233 aa16.94■□□□□ 0.3
SMG9-211ENST00000601170 STRN4Q9NRL3 753 aa16.94■□□□□ 0.3
SMG9-211ENST00000601170 NRBP1Q9UHY1 535 aa16.94■□□□□ 0.3
SMG9-211ENST00000601170 MYH7P12883 1935 aa16.94■□□□□ 0.3
SMG9-211ENST00000601170 PCCAP05165 728 aaPredicted RBP16.93■□□□□ 0.3
SMG9-211ENST00000601170 ZAP70P43403 619 aa16.93■□□□□ 0.3
SMG9-211ENST00000601170 C11orf57Q6ZUT1 292 aaPredicted RBP16.93■□□□□ 0.3
SMG9-211ENST00000601170 MTERF4Q7Z6M4 381 aaKnown RBP16.93■□□□□ 0.3
SMG9-211ENST00000601170 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
SMG9-211ENST00000601170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.93■□□□□ 0.3
SMG9-211ENST00000601170 FGAP02671 866 aa16.93■□□□□ 0.3
SMG9-211ENST00000601170 ME1P48163 572 aa16.93■□□□□ 0.3
SMG9-211ENST00000601170 LRMPQ12912 555 aa16.93■□□□□ 0.3
SMG9-211ENST00000601170 TRIM28Q13263 835 aaKnown RBP16.93■□□□□ 0.3
SMG9-211ENST00000601170 IQCB1Q15051 598 aa16.93■□□□□ 0.3
SMG9-211ENST00000601170 PUS7LQ9H0K6 701 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms