RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 RSBN1LQ6PCB5 846 aaPredicted RBP10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 USP17L1Q7RTZ2 530 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 CNTROBQ8N137 903 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 AGBL3Q8NEM8 1001 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 GMLQ99445 158 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 PGAP2Q9UHJ9 254 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 THSD7BQ9C0I4 1608 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 ECM29Q5VYK3 1845 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 SNAP23O00161 211 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 IPO8O15397 1037 aaKnown RBP10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 TAF5LO75529 589 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 UBTFL1P0CB47 393 aaPredicted RBP10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 TRIM27P14373 513 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 RFX5P48382 616 aaPredicted RBP10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 DACT2Q5SW24 774 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 STRIP1Q5VSL9 837 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 ATF7IPQ6VMQ6 1270 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 HELBQ8NG08 1087 aaPredicted RBP10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 ZC3H15Q8WU90 426 aaKnown RBP10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 KLRG1Q96E93 195 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 PUS3Q9BZE2 481 aaKnown RBP10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 RIPOR2Q9Y4F9 1068 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 MYH13Q9UKX3 1938 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 MROH5Q6ZUA9 1318 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 MYO3BQ8WXR4 1341 aa10.01□□□□□ -0.81
CHMP2A-205ENST00000600006 EGFRP00533 1210 aa10□□□□□ -0.81
CHMP2A-205ENST00000600006 ZNF280AP59817 542 aaPredicted RBP10□□□□□ -0.81
CHMP2A-205ENST00000600006 UBE4AQ14139 1066 aa10□□□□□ -0.81
CHMP2A-205ENST00000600006 KIF4BQ2VIQ3 1234 aa10□□□□□ -0.81
CHMP2A-205ENST00000600006 SAMD7Q7Z3H4 446 aa10□□□□□ -0.81
CHMP2A-205ENST00000600006 VGLL2Q8N8G2 317 aa10□□□□□ -0.81
CHMP2A-205ENST00000600006 MEIS3Q99687 375 aa10□□□□□ -0.81
CHMP2A-205ENST00000600006 CD209Q9NNX6 404 aa10□□□□□ -0.81
CHMP2A-205ENST00000600006 HDAC5Q9UQL6 1122 aa10□□□□□ -0.81
CHMP2A-205ENST00000600006 TNNQ9UQP3 1299 aa10□□□□□ -0.81
CHMP2A-205ENST00000600006 POLR2AP24928 1970 aaKnown RBP10□□□□□ -0.81
CHMP2A-205ENST00000600006 TMEM88BA6NKF7 163 aa9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 TBC1D10BQ4KMP7 808 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 LRRC24Q50LG9 513 aa9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 ZKSCAN2Q63HK3 967 aa9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 ZNF804AQ7Z570 1209 aa9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 JMYQ8N9B5 988 aa9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 KLHDC4Q8TBB5 520 aa9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 FRAT1Q92837 279 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 LRRFIP2Q9Y608 721 aaKnown RBP9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 CNTNAP1P78357 1384 aa9.99□□□□□ -0.81
CHMP2A-205ENST00000600006 EYA2O00167 538 aa9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 TRAF5O00463 557 aa9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 PLIN1O60240 522 aa9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 GNAI3P08754 354 aa9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 USP17L8P0C7I0 530 aa9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 IL1R1P14778 569 aa9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 PTPN12Q05209 780 aaKnown RBP9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 MXD3Q9BW11 206 aa9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 GLIS2Q9BZE0 524 aaPredicted RBP9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 FBXO3Q9UK99 471 aa9.98□□□□□ -0.81
CHMP2A-205ENST00000600006 PDE8BO95263 885 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 MMP14P50281 582 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 GTF2IP78347 998 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 FMR1Q06787 632 aaKnown RBP eCLIP9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 MTX1Q13505 466 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 TTLL5Q6EMB2 1281 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 CDC37L1Q7L3B6 337 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 FBXW7Q969H0 707 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 CLUAP1Q96AJ1 413 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 MYOZ2Q9NPC6 264 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 GGA3Q9NZ52 723 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 FAM205AQ6ZU69 1335 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 CEP350Q5VT06 3117 aa9.97□□□□□ -0.81
CHMP2A-205ENST00000600006 RASSF10A6NK89 507 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 CIAO1O76071 339 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 FGFR2P21802 821 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 GYG1P46976 350 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 FKBP1AP62942 108 aaKnown RBP9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 RBM26Q5T8P6 1007 aaKnown RBP9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 CST9Q5W186 159 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 ATG9AQ7Z3C6 839 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 CERS5Q8N5B7 392 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 TMEM57Q8N5G2 664 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 TDRD7Q8NHU6 1098 aaKnown RBP9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 FAM84BQ96KN1 310 aaPredicted RBP9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 COPRSQ9NQ92 184 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 MKRN1Q9UHC7 482 aaKnown RBP9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 ASTN2O75129 1339 aaPredicted RBP9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 PITPNM2Q9BZ72 1349 aa9.96□□□□□ -0.82
CHMP2A-205ENST00000600006 ADM5C9JUS6 153 aa9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 HIBADHP31937 336 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 PUM3Q15397 648 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 KRT26Q7Z3Y9 468 aa9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 FBXO33Q7Z6M2 555 aa9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 KIAA0825Q8IV33 1275 aa9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 DZIP1LQ8IYY4 767 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 OGFOD1Q8N543 542 aa9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 DCPSQ96C86 337 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 PAPPA2Q9BXP8 1791 aa9.95□□□□□ -0.82
CHMP2A-205ENST00000600006 COL1A1P02452 1464 aaPredicted RBP9.94□□□□□ -0.82
CHMP2A-205ENST00000600006 WNT10BO00744 389 aa9.94□□□□□ -0.82
CHMP2A-205ENST00000600006 SASH1O94885 1247 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms