RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	GLIS3	Q8NEA6	775 aa		10.76	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	RASSF4	Q9H2L5	321 aa		10.76	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	RECK	O95980	971 aa		10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	EIF4B	P23588	611 aa	Known RBP	10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	PERM1	Q5SV97	790 aa		10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	TMEM151A	Q8N4L1	468 aa		10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	HHIP	Q96QV1	700 aa		10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	TCF12	Q99081	682 aa		10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	PBX4	Q9BYU1	374 aa		10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	RBSN	Q9H1K0	784 aa		10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	LIN7B	Q9HAP6	207 aa		10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	VTI1B	Q9UEU0	232 aa		10.75	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	ITGAE	P38570	1179 aa		10.74	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	CCNJL	Q8IV13	435 aa		10.74	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	PLD4	Q96BZ4	506 aa		10.74	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	LPIN3	Q9BQK8	851 aa		10.74	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	SRCIN1	Q9C0H9	1055 aa		10.74	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	TRAK1	Q9UPV9	953 aa		10.74	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	CTSH	P09668	335 aa		10.73	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	LDLRAD1	Q5T700	205 aa		10.73	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	PRPF40B	Q6NWY9	871 aa	Known RBP	10.73	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.73	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	NXPE3	Q969Y0	559 aa		10.73	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	BACH2	Q9BYV9	841 aa		10.73	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	FAM8A1	Q9UBU6	413 aa		10.73	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	ALAS2	P22557	587 aa		10.72	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	TSNAXIP1	Q2TAA8	658 aa		10.72	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	ELMSAN1	Q6PJG2	1045 aa		10.72	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.72	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	SMG9	Q9H0W8	520 aa	Known RBP	10.72	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	ABCB6	Q9NP58	842 aa		10.72	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	FRRS1L	Q9P0K9	344 aa		10.72	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	STARD13	Q9Y3M8	1113 aa		10.72	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	PDE2A	O00408	941 aa	Predicted RBP	10.71	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	GDF11	O95390	407 aa		10.71	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	RASSF7	Q02833	373 aa		10.71	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	CEP135	Q66GS9	1140 aa		10.71	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	PSAPL1	Q6NUJ1	521 aa		10.71	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	GALNT6	Q8NCL4	622 aa		10.71	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	EDARADD	Q8WWZ3	215 aa		10.71	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	POP1	Q99575	1024 aa	Known RBP	10.71	□□□□□ -0.69
SOX2-OT-231	ENST00000599082	TMEM238L	A0A1B0GVL6	79 aa		10.7	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	METTL12	A8MUP2	240 aa		10.7	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	OIP5	O43482	229 aa		10.7	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	SMNDC1	O75940	238 aa	Known RBP eCLIP	10.7	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	USP17L7	P0C7H9	530 aa		10.7	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	GRIA4	P48058	902 aa		10.7	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	CRELD1	Q96HD1	420 aa		10.7	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	PPP4R2	Q9NY27	417 aa		10.7	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	BCR	P11274	1271 aa		10.69	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	LYPD4	Q6UWN0	246 aa		10.69	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	ADAMTSL4	Q6UY14	1074 aa		10.69	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	MICALL1	Q8N3F8	863 aa		10.69	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	C3orf58	Q8NDZ4	430 aa		10.69	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	TTC9	Q92623	222 aa		10.69	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	IGSF5	Q9NSI5	407 aa		10.69	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	LRRC4B	Q9NT99	713 aa		10.69	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	SHISA8	B8ZZ34	492 aa		10.68	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	CELA2B	P08218	269 aa	Predicted RBP	10.68	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	GSTT1	P30711	240 aa		10.68	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	FCGRT	P55899	365 aa		10.68	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	SPRED3	Q2MJR0	410 aa		10.68	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	C20orf204	Q6ZNR8	217 aa		10.68	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	WHAMM	Q8TF30	809 aa		10.68	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	NUDT8	Q8WV74	236 aa		10.68	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	RNF225	M0QZC1	329 aa	Predicted RBP	10.67	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	RGS9	O75916	674 aa	Predicted RBP	10.67	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	ALB	P02768	609 aa		10.67	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	CHSY3	Q70JA7	882 aa		10.67	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	TMEM87A	Q8NBN3	555 aa		10.67	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	ASAP3	Q8TDY4	903 aa		10.67	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	BTBD6	Q96KE9	485 aa		10.67	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	TRIM33	Q9UPN9	1127 aa		10.67	□□□□□ -0.7
SOX2-OT-231	ENST00000599082		A0A096LPE4	126 aa		10.66	□□□□□ -0.7
SOX2-OT-231	ENST00000599082		A0A1W2PPZ6	126 aa		10.66	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	ITPKA	P23677	461 aa		10.66	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	GRIK5	Q16478	980 aa		10.66	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	KANK3	Q6NY19	840 aa		10.66	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	XRCC5	P13010	732 aa	Known RBP	10.65	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	MEI1	Q5TIA1	1274 aa		10.65	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	DTHD1	Q6ZMT9	781 aa		10.65	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	JPH1	Q9HDC5	661 aa	Predicted RBP	10.65	□□□□□ -0.7
SOX2-OT-231	ENST00000599082	USP31	Q70CQ4	1352 aa		10.65	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	PTPRA	P18433	802 aa		10.64	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	PTPN12	Q05209	780 aa	Known RBP	10.64	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	BSND	Q8WZ55	320 aa		10.64	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	LACRT	Q9GZZ8	138 aa		10.64	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	ADAM19	Q9H013	955 aa		10.64	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	MUC3B	Q9H195	1237 aa		10.64	□□□□□ -0.71
SOX2-OT-231	ENST00000599082		M0R082	166 aa		10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	SCAMP3	O14828	347 aa	Known RBP	10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	TCF3	P15923	654 aa		10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	RANGAP1	P46060	587 aa	Predicted RBP	10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	TAF1C	Q15572	869 aa	Predicted RBP	10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	ZNF385C	Q66K41	422 aa	Predicted RBP	10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	GDF6	Q6KF10	455 aa	Predicted RBP	10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	C8orf86	Q6ZUL3	223 aa		10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	ZNF417	Q8TAU3	575 aa		10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	ZNF587	Q96SQ5	575 aa	Predicted RBP	10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	SOX13	Q9UN79	622 aa		10.63	□□□□□ -0.71

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