RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 A0A0D9SFI3 127 aa18.23■□□□□ 0.51
PNKP-204ENST00000594661 HIP1O00291 1037 aa18.23■□□□□ 0.51
PNKP-204ENST00000594661 PTH1RQ03431 593 aa18.23■□□□□ 0.51
PNKP-204ENST00000594661 CTIFO43310 598 aaKnown RBP18.22■□□□□ 0.51
PNKP-204ENST00000594661 SLFN14P0C7P3 912 aa18.22■□□□□ 0.51
PNKP-204ENST00000594661 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
PNKP-204ENST00000594661 NIP7Q9Y221 180 aaKnown RBP eCLIP18.22■□□□□ 0.51
PNKP-204ENST00000594661 SH3TC1Q8TE82 1336 aa18.22■□□□□ 0.51
PNKP-204ENST00000594661 ANKRD18BA2A2Z9 1011 aa18.21■□□□□ 0.51
PNKP-204ENST00000594661 TULP2O00295 520 aa18.21■□□□□ 0.51
PNKP-204ENST00000594661 HCLS1P14317 486 aaPredicted RBP18.21■□□□□ 0.51
PNKP-204ENST00000594661 IRX3P78415 501 aaPredicted RBP18.21■□□□□ 0.51
PNKP-204ENST00000594661 SMIM5Q71RC9 77 aa18.21■□□□□ 0.51
PNKP-204ENST00000594661 NOL8Q76FK4 1167 aaKnown RBP18.21■□□□□ 0.51
PNKP-204ENST00000594661 ZFP91Q96JP5 570 aaPredicted RBP18.21■□□□□ 0.51
PNKP-204ENST00000594661 UTP14AQ9BVJ6 771 aaKnown RBP18.21■□□□□ 0.51
PNKP-204ENST00000594661 RBM27Q9P2N5 1060 aaKnown RBP18.21■□□□□ 0.51
PNKP-204ENST00000594661 TRPC5Q9UL62 973 aaPredicted RBP18.21■□□□□ 0.51
PNKP-204ENST00000594661 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
PNKP-204ENST00000594661 PKP1Q13835 747 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 PARP10Q53GL7 1025 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 DDX46Q7L014 1031 aaKnown RBP18.2■□□□□ 0.5
PNKP-204ENST00000594661 TMEM63CQ9P1W3 806 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 RIPOR2Q9Y4F9 1068 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 DDX60Q8IY21 1712 aaKnown RBP18.2■□□□□ 0.5
PNKP-204ENST00000594661 ONECUT3O60422 494 aaPredicted RBP18.2■□□□□ 0.5
PNKP-204ENST00000594661 NTSR2O95665 410 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 ADORA1P30542 326 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 LDHAL6AQ6ZMR3 332 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 RASEFQ8IZ41 740 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 TIGD1Q96MW7 591 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 SNRKQ9NRH2 765 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 SNX14Q9Y5W7 946 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 SBF2Q86WG5 1849 aa18.2■□□□□ 0.5
PNKP-204ENST00000594661 MED23Q9ULK4 1368 aa18.19■□□□□ 0.5
PNKP-204ENST00000594661 CCDC171Q6TFL3 1326 aa18.19■□□□□ 0.5
PNKP-204ENST00000594661 SYCE3A1L190 88 aa18.19■□□□□ 0.5
PNKP-204ENST00000594661 CHGBP05060 677 aa18.19■□□□□ 0.5
PNKP-204ENST00000594661 SEPT12Q8IYM1 358 aa18.19■□□□□ 0.5
PNKP-204ENST00000594661 LRP5O75197 1615 aa18.19■□□□□ 0.5
PNKP-204ENST00000594661 AK7Q96M32 723 aa18.19■□□□□ 0.5
PNKP-204ENST00000594661 AKAP2Q9Y2D5 859 aa18.19■□□□□ 0.5
PNKP-204ENST00000594661 RFX7Q2KHR2 1363 aa18.18■□□□□ 0.5
PNKP-204ENST00000594661 METTL24Q5JXM2 366 aa18.18■□□□□ 0.5
PNKP-204ENST00000594661 ZNF589Q86UQ0 364 aaPredicted RBP18.18■□□□□ 0.5
PNKP-204ENST00000594661 XAGE2Q96GT9 111 aa18.18■□□□□ 0.5
PNKP-204ENST00000594661 ZNF652Q9Y2D9 606 aa18.18■□□□□ 0.5
PNKP-204ENST00000594661 GOLIM4O00461 696 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 CUL4AQ13619 759 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 SYCP1Q15431 976 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 RGS22Q8NE09 1264 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 CNNM1Q9NRU3 951 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 CCNL1Q9UK58 526 aaPredicted RBP18.17■□□□□ 0.5
PNKP-204ENST00000594661 SCN7AQ01118 1682 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 LAMB2P55268 1798 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 LY75O60449 1722 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 PRPF40AO75400 957 aaKnown RBP18.17■□□□□ 0.5
PNKP-204ENST00000594661 KBTBD3Q8NAB2 608 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 PAG1Q9NWQ8 432 aa18.17■□□□□ 0.5
PNKP-204ENST00000594661 IFIT1P09914 478 aaKnown RBP18.16■□□□□ 0.5
PNKP-204ENST00000594661 PRPF40BQ6NWY9 871 aaKnown RBP18.16■□□□□ 0.5
PNKP-204ENST00000594661 CLEC4GQ6UXB4 293 aa18.16■□□□□ 0.5
PNKP-204ENST00000594661 VGLL2Q8N8G2 317 aa18.16■□□□□ 0.5
PNKP-204ENST00000594661 EP400Q96L91 3159 aa18.16■□□□□ 0.5
PNKP-204ENST00000594661 RC3H1Q5TC82 1133 aaKnown RBP18.16■□□□□ 0.5
PNKP-204ENST00000594661 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
PNKP-204ENST00000594661 TSPYL1Q9H0U9 437 aa18.16■□□□□ 0.5
PNKP-204ENST00000594661 QTRT2Q9H974 415 aaKnown RBP18.16■□□□□ 0.5
PNKP-204ENST00000594661 RBM8AQ9Y5S9 174 aaKnown RBP18.16■□□□□ 0.5
PNKP-204ENST00000594661 MBD3O95983 291 aa18.15■□□□□ 0.5
PNKP-204ENST00000594661 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
PNKP-204ENST00000594661 TSPY26PQ9H489 355 aa18.15■□□□□ 0.5
PNKP-204ENST00000594661 SEC31BQ9NQW1 1179 aa18.15■□□□□ 0.5
PNKP-204ENST00000594661 CTNNA3Q9UI47 895 aa18.15■□□□□ 0.5
PNKP-204ENST00000594661 TAF1LQ8IZX4 1826 aa18.15■□□□□ 0.5
PNKP-204ENST00000594661 RIOK3O14730 519 aaKnown RBP18.14■□□□□ 0.5
PNKP-204ENST00000594661 GNPATO15228 680 aa18.14■□□□□ 0.5
PNKP-204ENST00000594661 UVSSAQ2YD98 709 aa18.14■□□□□ 0.5
PNKP-204ENST00000594661 GORABQ5T7V8 394 aa18.14■□□□□ 0.5
PNKP-204ENST00000594661 AMIGO3Q86WK7 504 aa18.14■□□□□ 0.5
PNKP-204ENST00000594661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.14■□□□□ 0.5
PNKP-204ENST00000594661 INTS4Q96HW7 963 aaKnown RBP18.14■□□□□ 0.5
PNKP-204ENST00000594661 SEC62Q99442 399 aaKnown RBP18.14■□□□□ 0.5
PNKP-204ENST00000594661 DDX41Q9UJV9 622 aaKnown RBP18.14■□□□□ 0.5
PNKP-204ENST00000594661 ZDHHC9Q9Y397 364 aa18.14■□□□□ 0.5
PNKP-204ENST00000594661 RPS6KA4O75676 772 aa18.14■□□□□ 0.49
PNKP-204ENST00000594661 FAM193AP78312 1265 aa18.14■□□□□ 0.49
PNKP-204ENST00000594661 TERF2Q15554 542 aa18.14■□□□□ 0.49
PNKP-204ENST00000594661 CCDC158Q5M9N0 1113 aa18.14■□□□□ 0.49
PNKP-204ENST00000594661 TTC39AQ5SRH9 613 aa18.14■□□□□ 0.49
PNKP-204ENST00000594661 KCNB2Q92953 911 aa18.14■□□□□ 0.49
PNKP-204ENST00000594661 MORC2Q9Y6X9 1032 aaPredicted RBP18.14■□□□□ 0.49
PNKP-204ENST00000594661 SPEF2Q9C093 1822 aa18.13■□□□□ 0.49
PNKP-204ENST00000594661 CAPN2P17655 700 aa18.13■□□□□ 0.49
PNKP-204ENST00000594661 SCARF1Q14162 830 aa18.13■□□□□ 0.49
PNKP-204ENST00000594661 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
PNKP-204ENST00000594661 CCDC129Q6ZRS4 1044 aa18.13■□□□□ 0.49
PNKP-204ENST00000594661 RNF214Q8ND24 703 aa18.13■□□□□ 0.49
PNKP-204ENST00000594661 CALCOCO1Q9P1Z2 691 aa18.13■□□□□ 0.49
PNKP-204ENST00000594661 SRP68Q9UHB9 627 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms