RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 CYP46A1Q9Y6A2 500 aa22.42■■□□□ 1.18
HDAC5-212ENST00000593013 LAMB2P55268 1798 aa22.42■■□□□ 1.18
HDAC5-212ENST00000593013 MSL1Q68DK7 614 aa22.41■■□□□ 1.18
HDAC5-212ENST00000593013 NBPF5PQ86XG9 351 aaPredicted RBP22.41■■□□□ 1.18
HDAC5-212ENST00000593013 NEUROD6Q96NK8 337 aa22.41■■□□□ 1.18
HDAC5-212ENST00000593013 NYXQ9GZU5 481 aa22.41■■□□□ 1.18
HDAC5-212ENST00000593013 ABCC12Q96J65 1359 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 DDX60Q8IY21 1712 aaKnown RBP22.4■■□□□ 1.18
HDAC5-212ENST00000593013 IRS4O14654 1257 aaPredicted RBP22.4■■□□□ 1.18
HDAC5-212ENST00000593013 PSMA5P28066 241 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 TIMM10P62072 90 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 IFIT5Q13325 482 aaKnown RBP22.4■■□□□ 1.18
HDAC5-212ENST00000593013 TPTE2Q6XPS3 522 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 NOL8Q76FK4 1167 aaKnown RBP22.4■■□□□ 1.18
HDAC5-212ENST00000593013 ALDH8A1Q9H2A2 487 aaPredicted RBP22.4■■□□□ 1.18
HDAC5-212ENST00000593013 PAG1Q9NWQ8 432 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 KCNJ4P48050 445 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 CTSWP56202 376 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 ERFEQ4G0M1 354 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 TTLL11Q8NHH1 800 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 ZSCAN31Q96LW9 406 aaPredicted RBP22.4■■□□□ 1.18
HDAC5-212ENST00000593013 PDRG1Q9NUG6 133 aa22.4■■□□□ 1.18
HDAC5-212ENST00000593013 NRXN2Q9P2S2 1712 aa22.39■■□□□ 1.18
HDAC5-212ENST00000593013 SERPINB2P05120 415 aa22.39■■□□□ 1.17
HDAC5-212ENST00000593013 MMP10P09238 476 aa22.39■■□□□ 1.17
HDAC5-212ENST00000593013 MCMDC2Q4G0Z9 681 aa22.39■■□□□ 1.17
HDAC5-212ENST00000593013 SLC10A5Q5PT55 438 aa22.39■■□□□ 1.17
HDAC5-212ENST00000593013 L1TD1Q5T7N2 865 aaKnown RBP22.39■■□□□ 1.17
HDAC5-212ENST00000593013 DDX46Q7L014 1031 aaKnown RBP22.39■■□□□ 1.17
HDAC5-212ENST00000593013 ISY1Q9ULR0 285 aaKnown RBP22.39■■□□□ 1.17
HDAC5-212ENST00000593013 ARAP2Q8WZ64 1704 aa22.39■■□□□ 1.17
HDAC5-212ENST00000593013 KLHL40Q2TBA0 621 aa22.38■■□□□ 1.17
HDAC5-212ENST00000593013 SH2B1Q9NRF2 756 aaPredicted RBP22.38■■□□□ 1.17
HDAC5-212ENST00000593013 HELLSQ9NRZ9 838 aa22.38■■□□□ 1.17
HDAC5-212ENST00000593013 NDUFB9Q9Y6M9 179 aa22.38■■□□□ 1.17
HDAC5-212ENST00000593013 HCLS1P14317 486 aaPredicted RBP22.37■■□□□ 1.17
HDAC5-212ENST00000593013 MYH7P12883 1935 aa22.37■■□□□ 1.17
HDAC5-212ENST00000593013 PRR5LQ6MZQ0 368 aa22.37■■□□□ 1.17
HDAC5-212ENST00000593013 CNBD1Q8NA66 436 aa22.37■■□□□ 1.17
HDAC5-212ENST00000593013 RIPOR2Q9Y4F9 1068 aa22.37■■□□□ 1.17
HDAC5-212ENST00000593013 U3KPZ7 1027 aaPredicted RBP22.37■■□□□ 1.17
HDAC5-212ENST00000593013 GOLIM4O00461 696 aa22.36■■□□□ 1.17
HDAC5-212ENST00000593013 PDE8AO60658 829 aa22.36■■□□□ 1.17
HDAC5-212ENST00000593013 IFIT1P09914 478 aaKnown RBP22.36■■□□□ 1.17
HDAC5-212ENST00000593013 CPA1P15085 419 aa22.36■■□□□ 1.17
HDAC5-212ENST00000593013 KRT32Q14532 448 aa22.36■■□□□ 1.17
HDAC5-212ENST00000593013 TAF7LQ5H9L4 462 aa22.36■■□□□ 1.17
HDAC5-212ENST00000593013 ZMYM1Q5SVZ6 1142 aa22.36■■□□□ 1.17
HDAC5-212ENST00000593013 LMBRD1Q9NUN5 540 aa22.36■■□□□ 1.17
HDAC5-212ENST00000593013 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.36■■□□□ 1.17
HDAC5-212ENST00000593013 ZBTB7AO95365 584 aa22.35■■□□□ 1.17
HDAC5-212ENST00000593013 ITGA6P23229 1130 aa22.35■■□□□ 1.17
HDAC5-212ENST00000593013 GTF2E1P29083 439 aaPredicted RBP22.35■■□□□ 1.17
HDAC5-212ENST00000593013 MCTP1Q6DN14 999 aa22.35■■□□□ 1.17
HDAC5-212ENST00000593013 GZF1Q9H116 711 aaPredicted RBP22.35■■□□□ 1.17
HDAC5-212ENST00000593013 GREM2Q9H772 168 aa22.35■■□□□ 1.17
HDAC5-212ENST00000593013 AKAP11Q9UKA4 1901 aa22.35■■□□□ 1.17
HDAC5-212ENST00000593013 ANKRD18BA2A2Z9 1011 aa22.34■■□□□ 1.17
HDAC5-212ENST00000593013 XAGE2Q96GT9 111 aa22.34■■□□□ 1.17
HDAC5-212ENST00000593013 WDR33Q9C0J8 1336 aaKnown RBP22.34■■□□□ 1.17
HDAC5-212ENST00000593013 GOLGA6L3A6NEY3 463 aa22.34■■□□□ 1.17
HDAC5-212ENST00000593013 HSP90B1P14625 803 aaKnown RBP22.34■■□□□ 1.17
HDAC5-212ENST00000593013 CCDC158Q5M9N0 1113 aa22.34■■□□□ 1.17
HDAC5-212ENST00000593013 CCDC24Q8N4L8 307 aa22.34■■□□□ 1.17
HDAC5-212ENST00000593013 PARP3Q9Y6F1 533 aa22.34■■□□□ 1.17
HDAC5-212ENST00000593013 RPS6KB1P23443 525 aa22.33■■□□□ 1.17
HDAC5-212ENST00000593013 ANKRD1Q15327 319 aa22.33■■□□□ 1.17
HDAC5-212ENST00000593013 BLOC1S2Q6QNY1 142 aa22.33■■□□□ 1.17
HDAC5-212ENST00000593013 MTFR1LQ9H019 292 aa22.33■■□□□ 1.17
HDAC5-212ENST00000593013 LAMA4Q16363 1823 aa22.32■■□□□ 1.16
HDAC5-212ENST00000593013 LARGE1O95461 756 aa22.32■■□□□ 1.16
HDAC5-212ENST00000593013 ADORA1P30542 326 aa22.32■■□□□ 1.16
HDAC5-212ENST00000593013 C3orf67Q6ZVT6 689 aa22.32■■□□□ 1.16
HDAC5-212ENST00000593013 VGLL2Q8N8G2 317 aa22.32■■□□□ 1.16
HDAC5-212ENST00000593013 ZNF512BQ96KM6 892 aaPredicted RBP22.32■■□□□ 1.16
HDAC5-212ENST00000593013 DSCC1Q9BVC3 393 aa22.32■■□□□ 1.16
HDAC5-212ENST00000593013 RNF113AO15541 343 aaKnown RBP22.31■■□□□ 1.16
HDAC5-212ENST00000593013 LRRFIP1Q32MZ4 808 aaKnown RBP22.31■■□□□ 1.16
HDAC5-212ENST00000593013 CCDC85AQ96PX6 553 aaPredicted RBP22.31■■□□□ 1.16
HDAC5-212ENST00000593013 SEC62Q99442 399 aaKnown RBP22.31■■□□□ 1.16
HDAC5-212ENST00000593013 TNRC6CQ9HCJ0 1690 aaKnown RBP22.31■■□□□ 1.16
HDAC5-212ENST00000593013 CHGBP05060 677 aa22.31■■□□□ 1.16
HDAC5-212ENST00000593013 ATP2B3Q16720 1220 aa22.31■■□□□ 1.16
HDAC5-212ENST00000593013 TTC39AQ5SRH9 613 aa22.31■■□□□ 1.16
HDAC5-212ENST00000593013 LDHAL6AQ6ZMR3 332 aa22.31■■□□□ 1.16
HDAC5-212ENST00000593013 CCDC129Q6ZRS4 1044 aa22.31■■□□□ 1.16
HDAC5-212ENST00000593013 TAF6LQ9Y6J9 622 aa22.31■■□□□ 1.16
HDAC5-212ENST00000593013 RTL9Q8NET4 1388 aa22.3■■□□□ 1.16
HDAC5-212ENST00000593013 ANKRD31Q8N7Z5 1873 aa22.3■■□□□ 1.16
HDAC5-212ENST00000593013 NPHP1O15259 732 aa22.3■■□□□ 1.16
HDAC5-212ENST00000593013 ST5P78524 1137 aa22.3■■□□□ 1.16
HDAC5-212ENST00000593013 ST3GAL1Q11201 340 aa22.3■■□□□ 1.16
HDAC5-212ENST00000593013 SF3B3Q15393 1217 aaKnown RBP22.3■■□□□ 1.16
HDAC5-212ENST00000593013 METTL24Q5JXM2 366 aa22.3■■□□□ 1.16
HDAC5-212ENST00000593013 ATF5Q9Y2D1 282 aaPredicted RBP22.3■■□□□ 1.16
HDAC5-212ENST00000593013 DDX49Q9Y6V7 483 aaKnown RBP22.3■■□□□ 1.16
HDAC5-212ENST00000593013 SMC3Q9UQE7 1217 aa22.29■■□□□ 1.16
HDAC5-212ENST00000593013 ZFYP08048 801 aaPredicted RBP22.28■■□□□ 1.16
HDAC5-212ENST00000593013 ME3Q16798 604 aa22.28■■□□□ 1.16
HDAC5-212ENST00000593013 GORABQ5T7V8 394 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms