RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 CRAMP1Q96RY5 1269 aa13.8□□□□□ -0.2
TUBD1-211ENST00000591548 ANKRD2Q9GZV1 360 aa13.8□□□□□ -0.2
TUBD1-211ENST00000591548 ANTXR1Q9H6X2 564 aa13.8□□□□□ -0.2
TUBD1-211ENST00000591548 DIAPH3Q9NSV4 1193 aa13.8□□□□□ -0.2
TUBD1-211ENST00000591548 SRGNP10124 158 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 PDE6BP35913 854 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 ZAP70P43403 619 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 BCAMP50895 628 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 FKBP4Q02790 459 aaKnown RBP eCLIP13.79□□□□□ -0.2
TUBD1-211ENST00000591548 UPF1Q92900 1129 aaKnown RBP eCLIP13.79□□□□□ -0.2
TUBD1-211ENST00000591548 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 HIP1O00291 1037 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 BBOX1O75936 387 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 CHGBP05060 677 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 UQCRFS1P1P0C7P4 283 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 NMIQ13287 307 aaPredicted RBP13.79□□□□□ -0.2
TUBD1-211ENST00000591548 AKAP11Q9UKA4 1901 aa13.79□□□□□ -0.2
TUBD1-211ENST00000591548 RFX7Q2KHR2 1363 aa13.78□□□□□ -0.2
TUBD1-211ENST00000591548 NPR1P16066 1061 aa13.78□□□□□ -0.2
TUBD1-211ENST00000591548 KLRK1P26718 216 aa13.78□□□□□ -0.2
TUBD1-211ENST00000591548 SLC16A10Q8TF71 515 aa13.78□□□□□ -0.2
TUBD1-211ENST00000591548 RUFY2Q8WXA3 655 aa13.78□□□□□ -0.2
TUBD1-211ENST00000591548 ANO2Q9NQ90 1003 aa13.78□□□□□ -0.2
TUBD1-211ENST00000591548 HMG20BQ9P0W2 317 aa13.78□□□□□ -0.2
TUBD1-211ENST00000591548 COL11A2P13942 1736 aaPredicted RBP13.77□□□□□ -0.2
TUBD1-211ENST00000591548 ZNF804BA4D1E1 1349 aa13.77□□□□□ -0.2
TUBD1-211ENST00000591548 A0A0D9SFI3 127 aa13.77□□□□□ -0.21
TUBD1-211ENST00000591548 CYP2E1P05181 493 aaPredicted RBP13.77□□□□□ -0.21
TUBD1-211ENST00000591548 GYG1P46976 350 aa13.77□□□□□ -0.21
TUBD1-211ENST00000591548 RASGRF1Q13972 1273 aa13.77□□□□□ -0.21
TUBD1-211ENST00000591548 FAM84BQ96KN1 310 aaPredicted RBP13.77□□□□□ -0.21
TUBD1-211ENST00000591548 KIF2CQ99661 725 aa13.77□□□□□ -0.21
TUBD1-211ENST00000591548 IRS2Q9Y4H2 1338 aa13.76□□□□□ -0.21
TUBD1-211ENST00000591548 KCNJ4P48050 445 aa13.76□□□□□ -0.21
TUBD1-211ENST00000591548 GPSM2P81274 684 aa13.76□□□□□ -0.21
TUBD1-211ENST00000591548 TICAM2Q86XR7 235 aa13.76□□□□□ -0.21
TUBD1-211ENST00000591548 SPATA5Q8NB90 893 aa13.76□□□□□ -0.21
TUBD1-211ENST00000591548 ANKIB1Q9P2G1 1089 aa13.76□□□□□ -0.21
TUBD1-211ENST00000591548 XDHP47989 1333 aa13.76□□□□□ -0.21
TUBD1-211ENST00000591548 SLFNL1Q499Z3 407 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 FBXO33Q7Z6M2 555 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 TXNRD3Q86VQ6 643 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 MASTLQ96GX5 879 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 LSG1Q9H089 658 aaKnown RBP13.75□□□□□ -0.21
TUBD1-211ENST00000591548 LEMD3Q9Y2U8 911 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 RAD50Q92878 1312 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 PPEF1O14829 653 aaPredicted RBP13.75□□□□□ -0.21
TUBD1-211ENST00000591548 ALDH1B1P30837 517 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 CAVIN4Q5BKX8 364 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 TMC4Q7Z404 712 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 C2CD5Q86YS7 1000 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 SP8Q8IXZ3 490 aa13.75□□□□□ -0.21
TUBD1-211ENST00000591548 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
TUBD1-211ENST00000591548 SEC62Q99442 399 aaKnown RBP13.75□□□□□ -0.21
TUBD1-211ENST00000591548 PIH1D3Q9NQM4 214 aaKnown RBP13.75□□□□□ -0.21
TUBD1-211ENST00000591548 IQSEC3Q9UPP2 1182 aaPredicted RBP13.75□□□□□ -0.21
TUBD1-211ENST00000591548 MED23Q9ULK4 1368 aa13.74□□□□□ -0.21
TUBD1-211ENST00000591548 LRRC37AA6NMS7 1700 aa13.74□□□□□ -0.21
TUBD1-211ENST00000591548 RNF113AO15541 343 aaKnown RBP13.74□□□□□ -0.21
TUBD1-211ENST00000591548 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
TUBD1-211ENST00000591548 PTH1RQ03431 593 aa13.74□□□□□ -0.21
TUBD1-211ENST00000591548 TTF1Q15361 905 aaPredicted RBP13.74□□□□□ -0.21
TUBD1-211ENST00000591548 ZMYM1Q5SVZ6 1142 aa13.74□□□□□ -0.21
TUBD1-211ENST00000591548 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
TUBD1-211ENST00000591548 PODXL2Q9NZ53 605 aa13.74□□□□□ -0.21
TUBD1-211ENST00000591548 NSFL1CQ9UNZ2 370 aaKnown RBP13.74□□□□□ -0.21
TUBD1-211ENST00000591548 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
TUBD1-211ENST00000591548 H0YIN7 160 aa13.73□□□□□ -0.21
TUBD1-211ENST00000591548 CHRNA5P30532 468 aa13.73□□□□□ -0.21
TUBD1-211ENST00000591548 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
TUBD1-211ENST00000591548 KIAA1211Q6ZU35 1233 aa13.73□□□□□ -0.21
TUBD1-211ENST00000591548 GNL3LQ9NVN8 582 aaKnown RBP13.73□□□□□ -0.21
TUBD1-211ENST00000591548 COL1A1P02452 1464 aaPredicted RBP13.73□□□□□ -0.21
TUBD1-211ENST00000591548 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
TUBD1-211ENST00000591548 C10orf71Q711Q0 1435 aa13.73□□□□□ -0.21
TUBD1-211ENST00000591548 ZBTB7AO95365 584 aa13.72□□□□□ -0.21
TUBD1-211ENST00000591548 HIBADHP31937 336 aaKnown RBP13.72□□□□□ -0.21
TUBD1-211ENST00000591548 R3HDM1Q15032 1099 aaKnown RBP13.72□□□□□ -0.21
TUBD1-211ENST00000591548 MCMDC2Q4G0Z9 681 aa13.72□□□□□ -0.21
TUBD1-211ENST00000591548 OLFM4Q6UX06 510 aa13.72□□□□□ -0.21
TUBD1-211ENST00000591548 C15orf52Q6ZUT6 534 aaKnown RBP13.72□□□□□ -0.21
TUBD1-211ENST00000591548 VPS37DQ86XT2 251 aa13.72□□□□□ -0.21
TUBD1-211ENST00000591548 ZNF622Q969S3 477 aaKnown RBP eCLIP13.72□□□□□ -0.21
TUBD1-211ENST00000591548 DDRGK1Q96HY6 314 aa13.72□□□□□ -0.21
TUBD1-211ENST00000591548 GPR101Q96P66 508 aaPredicted RBP13.72□□□□□ -0.21
TUBD1-211ENST00000591548 HELLSQ9NRZ9 838 aa13.72□□□□□ -0.21
TUBD1-211ENST00000591548 POLLQ9UGP5 575 aa13.72□□□□□ -0.21
TUBD1-211ENST00000591548 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
TUBD1-211ENST00000591548 UFL1O94874 794 aa13.71□□□□□ -0.21
TUBD1-211ENST00000591548 ZFYP08048 801 aaPredicted RBP13.71□□□□□ -0.21
TUBD1-211ENST00000591548 ATP2B4P23634 1241 aa13.71□□□□□ -0.21
TUBD1-211ENST00000591548 HSPA4P34932 840 aa13.71□□□□□ -0.21
TUBD1-211ENST00000591548 LRRFIP1Q32MZ4 808 aaKnown RBP13.71□□□□□ -0.21
TUBD1-211ENST00000591548 CCDC129Q6ZRS4 1044 aa13.71□□□□□ -0.21
TUBD1-211ENST00000591548 TBC1D16Q8TBP0 767 aa13.71□□□□□ -0.21
TUBD1-211ENST00000591548 OSBP2Q969R2 916 aa13.71□□□□□ -0.21
TUBD1-211ENST00000591548 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
TUBD1-211ENST00000591548 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
TUBD1-211ENST00000591548 MYO5AQ9Y4I1 1855 aaKnown RBP13.71□□□□□ -0.22
TUBD1-211ENST00000591548 SEMA3EO15041 775 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms