RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 C10orf71Q711Q0 1435 aa23.44■■□□□ 1.34
SPHK1-207ENST00000590959 EDC3Q96F86 508 aaKnown RBP23.43■■□□□ 1.34
SPHK1-207ENST00000590959 IL25Q9H293 177 aa23.43■■□□□ 1.34
SPHK1-207ENST00000590959 CIZ1Q9ULV3 898 aaPredicted RBP23.43■■□□□ 1.34
SPHK1-207ENST00000590959 RFX7Q2KHR2 1363 aa23.43■■□□□ 1.34
SPHK1-207ENST00000590959 DDX11L8A8MPP1 907 aa23.43■■□□□ 1.34
SPHK1-207ENST00000590959 RTN4Q9NQC3 1192 aaKnown RBP23.43■■□□□ 1.34
SPHK1-207ENST00000590959 UTRNP46939 3433 aa23.43■■□□□ 1.34
SPHK1-207ENST00000590959 FGFR2P21802 821 aa23.42■■□□□ 1.34
SPHK1-207ENST00000590959 CHRNA5P30532 468 aa23.42■■□□□ 1.34
SPHK1-207ENST00000590959 HELBQ8NG08 1087 aaPredicted RBP23.42■■□□□ 1.34
SPHK1-207ENST00000590959 BSDC1Q9NW68 430 aaPredicted RBP23.42■■□□□ 1.34
SPHK1-207ENST00000590959 PAG1Q9NWQ8 432 aa23.42■■□□□ 1.34
SPHK1-207ENST00000590959 NDUFB9Q9Y6M9 179 aa23.42■■□□□ 1.34
SPHK1-207ENST00000590959 SRGNP10124 158 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 MCCP23508 829 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 KIAA1211Q6ZU35 1233 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 SLC51AQ86UW1 340 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 TICAM2Q86XR7 235 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 CELF1Q92879 486 aaKnown RBP23.41■■□□□ 1.34
SPHK1-207ENST00000590959 COL11A2P13942 1736 aaPredicted RBP23.41■■□□□ 1.34
SPHK1-207ENST00000590959 RAD50Q92878 1312 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 SLC5A1P13866 664 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 PDE6BP35913 854 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 CHRNDQ07001 517 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 KBTBD3Q8NAB2 608 aa23.41■■□□□ 1.34
SPHK1-207ENST00000590959 PPP1R1BQ9UD71 204 aaPredicted RBP23.41■■□□□ 1.34
SPHK1-207ENST00000590959 GOLIM4O00461 696 aa23.4■■□□□ 1.34
SPHK1-207ENST00000590959 DDX46Q7L014 1031 aaKnown RBP23.4■■□□□ 1.34
SPHK1-207ENST00000590959 ZNF512BQ96KM6 892 aaPredicted RBP23.4■■□□□ 1.34
SPHK1-207ENST00000590959 KIF13BQ9NQT8 1826 aa23.39■■□□□ 1.34
SPHK1-207ENST00000590959 TAF5LO75529 589 aa23.39■■□□□ 1.34
SPHK1-207ENST00000590959 NMIQ13287 307 aaPredicted RBP23.39■■□□□ 1.34
SPHK1-207ENST00000590959 RPS8P62241 208 aaKnown RBP23.39■■□□□ 1.33
SPHK1-207ENST00000590959 C2CD5Q86YS7 1000 aa23.39■■□□□ 1.33
SPHK1-207ENST00000590959 KLHL34Q8N239 644 aa23.39■■□□□ 1.33
SPHK1-207ENST00000590959 RPGRQ92834 1020 aaKnown RBP23.39■■□□□ 1.33
SPHK1-207ENST00000590959 A0A0G2JLW4 131 aa23.38■■□□□ 1.33
SPHK1-207ENST00000590959 FAM227BQ96M60 508 aa23.38■■□□□ 1.33
SPHK1-207ENST00000590959 FKBP4Q02790 459 aaKnown RBP eCLIP23.37■■□□□ 1.335e-8■■□□□ 14.2
SPHK1-207ENST00000590959 SPEF2Q9C093 1822 aa23.37■■□□□ 1.33
SPHK1-207ENST00000590959 GOLGA6L3A6NEY3 463 aa23.36■■□□□ 1.33
SPHK1-207ENST00000590959 KCNA3P22001 575 aa23.36■■□□□ 1.33
SPHK1-207ENST00000590959 HOXA10P31260 410 aaPredicted RBP23.36■■□□□ 1.33
SPHK1-207ENST00000590959 RABEP1Q15276 862 aa23.36■■□□□ 1.33
SPHK1-207ENST00000590959 CCDC102BQ68D86 513 aa23.36■■□□□ 1.33
SPHK1-207ENST00000590959 LSG1Q9H089 658 aaKnown RBP23.36■■□□□ 1.33
SPHK1-207ENST00000590959 SNRKQ9NRH2 765 aa23.36■■□□□ 1.33
SPHK1-207ENST00000590959 FSD2A1L4K1 749 aa23.36■■□□□ 1.33
SPHK1-207ENST00000590959 H0YIN7 160 aa23.36■■□□□ 1.33
SPHK1-207ENST00000590959 UQCRFS1P1P0C7P4 283 aa23.36■■□□□ 1.33
SPHK1-207ENST00000590959 A0A0D9SFI3 127 aa23.35■■□□□ 1.33
SPHK1-207ENST00000590959 DPEP1P16444 411 aa23.35■■□□□ 1.33
SPHK1-207ENST00000590959 ANAPC15P60006 121 aa23.35■■□□□ 1.33
SPHK1-207ENST00000590959 ZNF622Q969S3 477 aaKnown RBP eCLIP23.35■■□□□ 1.33
SPHK1-207ENST00000590959 MINPP1Q9UNW1 487 aa23.35■■□□□ 1.33
SPHK1-207ENST00000590959 NPR1P16066 1061 aa23.34■■□□□ 1.33
SPHK1-207ENST00000590959 ARID4AP29374 1257 aaPredicted RBP23.34■■□□□ 1.33
SPHK1-207ENST00000590959 SCARF1Q14162 830 aa23.34■■□□□ 1.33
SPHK1-207ENST00000590959 LRRFIP1Q32MZ4 808 aaKnown RBP23.34■■□□□ 1.33
SPHK1-207ENST00000590959 MASTLQ96GX5 879 aa23.34■■□□□ 1.33
SPHK1-207ENST00000590959 RBM17Q96I25 401 aaKnown RBP23.34■■□□□ 1.33
SPHK1-207ENST00000590959 WWC3Q9ULE0 1092 aa23.34■■□□□ 1.33
SPHK1-207ENST00000590959 KIAA1551Q9HCM1 1747 aa23.34■■□□□ 1.33
SPHK1-207ENST00000590959 HSPA4P34932 840 aa23.34■■□□□ 1.33
SPHK1-207ENST00000590959 GRAPQ13588 217 aa23.34■■□□□ 1.33
SPHK1-207ENST00000590959 GRAPLQ8TC17 118 aaPredicted RBP23.34■■□□□ 1.33
SPHK1-207ENST00000590959 ARAP2Q8WZ64 1704 aa23.34■■□□□ 1.33
SPHK1-207ENST00000590959 SNAP23O00161 211 aa23.33■■□□□ 1.33
SPHK1-207ENST00000590959 MCAMP43121 646 aa23.33■■□□□ 1.33
SPHK1-207ENST00000590959 PHKA1P46020 1223 aa23.33■■□□□ 1.33
SPHK1-207ENST00000590959 UBE4AQ14139 1066 aa23.33■■□□□ 1.33
SPHK1-207ENST00000590959 ZAP70P43403 619 aa23.32■■□□□ 1.32
SPHK1-207ENST00000590959 NLGN2Q8NFZ4 835 aa23.32■■□□□ 1.32
SPHK1-207ENST00000590959 CRAMP1Q96RY5 1269 aa23.32■■□□□ 1.32
SPHK1-207ENST00000590959 CD2APQ9Y5K6 639 aa23.32■■□□□ 1.32
SPHK1-207ENST00000590959 MED23Q9ULK4 1368 aa23.32■■□□□ 1.32
SPHK1-207ENST00000590959 CCDC171Q6TFL3 1326 aa23.32■■□□□ 1.32
SPHK1-207ENST00000590959 CACNA1SQ13698 1873 aa23.32■■□□□ 1.32
SPHK1-207ENST00000590959 DDIT3P35638 169 aa23.32■■□□□ 1.32
SPHK1-207ENST00000590959 TGFB2P61812 414 aa23.31■■□□□ 1.32
SPHK1-207ENST00000590959 FHDC1Q9C0D6 1143 aaPredicted RBP23.31■■□□□ 1.32
SPHK1-207ENST00000590959 ANKRD2Q9GZV1 360 aa23.31■■□□□ 1.32
SPHK1-207ENST00000590959 TTF1Q15361 905 aaPredicted RBP23.3■■□□□ 1.32
SPHK1-207ENST00000590959 SKOR2Q2VWA4 1001 aaPredicted RBP23.3■■□□□ 1.32
SPHK1-207ENST00000590959 MCMDC2Q4G0Z9 681 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 OLFM4Q6UX06 510 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 PI16Q6UXB8 463 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 IL17RAQ96F46 866 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 SLX4Q8IY92 1834 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 TRAK2O60296 914 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 PTH1RQ03431 593 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 STYK1Q6J9G0 422 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 GBP4Q96PP9 640 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 HELLSQ9NRZ9 838 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 PALD1Q9ULE6 856 aa23.3■■□□□ 1.32
SPHK1-207ENST00000590959 RNF113AO15541 343 aaKnown RBP23.29■■□□□ 1.32
SPHK1-207ENST00000590959 ZFYP08048 801 aaPredicted RBP23.29■■□□□ 1.32
SPHK1-207ENST00000590959 DLEC1Q9Y238 1755 aa23.28■■□□□ 1.32
SPHK1-207ENST00000590959 WTIPA6NIX2 430 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms