RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MTFR1Q15390 333 aa8.14□□□□□ -1.11
VPS25-204ENST00000589577 GPR153Q6NV75 609 aa8.14□□□□□ -1.11
VPS25-204ENST00000589577 ARMC9Q7Z3E5 817 aa8.14□□□□□ -1.11
VPS25-204ENST00000589577 ZNF428Q96B54 188 aa8.14□□□□□ -1.11
VPS25-204ENST00000589577 EYA3Q99504 573 aa8.14□□□□□ -1.11
VPS25-204ENST00000589577 THUMPD2Q9BTF0 503 aaKnown RBP8.14□□□□□ -1.11
VPS25-204ENST00000589577 MTMR10Q9NXD2 777 aa8.14□□□□□ -1.11
VPS25-204ENST00000589577 ANGEL1Q9UNK9 670 aaKnown RBP8.14□□□□□ -1.11
VPS25-204ENST00000589577 KNSTRNQ9Y448 316 aa8.14□□□□□ -1.11
VPS25-204ENST00000589577 SPEF2Q9C093 1822 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 TESPA1A2RU30 521 aaPredicted RBP8.13□□□□□ -1.11
VPS25-204ENST00000589577 SASH1O94885 1247 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 NF2P35240 595 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 MAP3K11Q16584 847 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 PROSER3Q2NL68 480 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 MXD3Q9BW11 206 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 ARHGAP39Q9C0H5 1083 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 PODXL2Q9NZ53 605 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 STAP2Q9UGK3 403 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 TIMELESSQ9UNS1 1208 aa8.13□□□□□ -1.11
VPS25-204ENST00000589577 COL1A1P02452 1464 aaPredicted RBP8.13□□□□□ -1.11
VPS25-204ENST00000589577 SH3TC1Q8TE82 1336 aa8.12□□□□□ -1.11
VPS25-204ENST00000589577 EIF4A1P60842 406 aaKnown RBP8.12□□□□□ -1.11
VPS25-204ENST00000589577 TAF7Q15545 349 aaPredicted RBP8.12□□□□□ -1.11
VPS25-204ENST00000589577 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
VPS25-204ENST00000589577 ZC3H12CQ9C0D7 883 aaKnown RBP8.12□□□□□ -1.11
VPS25-204ENST00000589577 TRMT112Q9UI30 125 aaKnown RBP8.12□□□□□ -1.11
VPS25-204ENST00000589577 UFL1O94874 794 aa8.11□□□□□ -1.11
VPS25-204ENST00000589577 ANXA1P04083 346 aa8.11□□□□□ -1.11
VPS25-204ENST00000589577 GJA8P48165 433 aa8.11□□□□□ -1.11
VPS25-204ENST00000589577 SF3B3Q15393 1217 aaKnown RBP8.11□□□□□ -1.11
VPS25-204ENST00000589577 RTF1Q92541 710 aaKnown RBP8.11□□□□□ -1.11
VPS25-204ENST00000589577 ZBED3Q96IU2 234 aaPredicted RBP8.11□□□□□ -1.11
VPS25-204ENST00000589577 MS4A4AQ96JQ5 239 aa8.11□□□□□ -1.11
VPS25-204ENST00000589577 HTATIP2Q9BUP3 242 aa8.11□□□□□ -1.11
VPS25-204ENST00000589577 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.11□□□□□ -1.11
VPS25-204ENST00000589577 RAPGEFL1Q9UHV5 662 aa8.11□□□□□ -1.11
VPS25-204ENST00000589577 NR2E3Q9Y5X4 410 aa8.11□□□□□ -1.11
VPS25-204ENST00000589577 USP17L3A6NCW0 530 aa8.1□□□□□ -1.11
VPS25-204ENST00000589577 USP17L4A6NCW7 530 aa8.1□□□□□ -1.11
VPS25-204ENST00000589577 CTGFP29279 349 aa8.1□□□□□ -1.11
VPS25-204ENST00000589577 DACT2Q5SW24 774 aa8.1□□□□□ -1.11
VPS25-204ENST00000589577 ANKRD13DQ6ZTN6 518 aa8.1□□□□□ -1.11
VPS25-204ENST00000589577 USP17L1Q7RTZ2 530 aa8.1□□□□□ -1.11
VPS25-204ENST00000589577 GDF15Q99988 308 aa8.1□□□□□ -1.11
VPS25-204ENST00000589577 MGAMO43451 1857 aa8.1□□□□□ -1.11
VPS25-204ENST00000589577 DNAH12Q6ZR08 3092 aa8.09□□□□□ -1.11
VPS25-204ENST00000589577 HTATSF1O43719 755 aaKnown RBP8.09□□□□□ -1.11
VPS25-204ENST00000589577 GJB1P08034 283 aa8.09□□□□□ -1.11
VPS25-204ENST00000589577 COL9A1P20849 921 aa8.09□□□□□ -1.11
VPS25-204ENST00000589577 BMP8BP34820 402 aa8.09□□□□□ -1.11
VPS25-204ENST00000589577 RPS8P62241 208 aaKnown RBP8.09□□□□□ -1.11
VPS25-204ENST00000589577 LACTBP83111 547 aaPredicted RBP8.09□□□□□ -1.11
VPS25-204ENST00000589577 LRIT3Q3SXY7 679 aa8.09□□□□□ -1.11
VPS25-204ENST00000589577 OTUD7BQ6GQQ9 843 aa8.09□□□□□ -1.11
VPS25-204ENST00000589577 APOBEC3FQ8IUX4 373 aaKnown RBP8.09□□□□□ -1.11
VPS25-204ENST00000589577 BRI3BPQ8WY22 251 aa8.09□□□□□ -1.11
VPS25-204ENST00000589577 G3V3G9 751 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 PER1O15534 1290 aaPredicted RBP8.08□□□□□ -1.12
VPS25-204ENST00000589577 EVI5O60447 810 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 FARP2O94887 1054 aaPredicted RBP8.08□□□□□ -1.12
VPS25-204ENST00000589577 HSPA5P11021 654 aaKnown RBP8.08□□□□□ -1.12
VPS25-204ENST00000589577 CCL5P13501 91 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 BCAMP50895 628 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 TAF1CQ15572 869 aaPredicted RBP8.08□□□□□ -1.12
VPS25-204ENST00000589577 CC2D1BQ5T0F9 858 aaKnown RBP8.08□□□□□ -1.12
VPS25-204ENST00000589577 DCAF8Q5TAQ9 597 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 FAM43AQ8N2R8 423 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 NKX2-3Q8TAU0 364 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 CNKSR2Q8WXI2 1034 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 FAM89AQ96GI7 184 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 GUCD1Q96NT3 240 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 DEFB129Q9H1M3 183 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 SEC31BQ9NQW1 1179 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 GGA1Q9UJY5 639 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 ARAP2Q8WZ64 1704 aa8.08□□□□□ -1.12
VPS25-204ENST00000589577 COL2A1P02458 1487 aaPredicted RBP8.07□□□□□ -1.12
VPS25-204ENST00000589577 AOX1Q06278 1338 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 RPTORQ8N122 1335 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 UNCXA6NJT0 531 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 USP2O75604 605 aaPredicted RBP8.07□□□□□ -1.12
VPS25-204ENST00000589577 ARHGEF6Q15052 776 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 HSP90AB3PQ58FF7 597 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 COPS6Q7L5N1 327 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 PODNQ7Z5L7 613 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 XAGE3Q8WTP9 111 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 U2AF1L4Q8WU68 220 aaKnown RBP8.07□□□□□ -1.12
VPS25-204ENST00000589577 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 ANKIB1Q9P2G1 1089 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 PCDHAC2Q9Y5I4 1007 aa8.07□□□□□ -1.12
VPS25-204ENST00000589577 PPP1R12BO60237 982 aaPredicted RBP8.06□□□□□ -1.12
VPS25-204ENST00000589577 PLA2G5P39877 138 aa8.06□□□□□ -1.12
VPS25-204ENST00000589577 AIMP1Q12904 312 aaKnown RBP8.06□□□□□ -1.12
VPS25-204ENST00000589577 RTL5Q5HYW3 569 aaPredicted RBP8.06□□□□□ -1.12
VPS25-204ENST00000589577 NBPF12Q5TAG4 269 aaPredicted RBP8.06□□□□□ -1.12
VPS25-204ENST00000589577 OGFOD1Q8N543 542 aa8.06□□□□□ -1.12
VPS25-204ENST00000589577 PNISRQ8TF01 805 aaKnown RBP8.06□□□□□ -1.12
VPS25-204ENST00000589577 ELP3Q9H9T3 547 aa8.06□□□□□ -1.12
VPS25-204ENST00000589577 ZFYVE28Q9HCC9 887 aa8.06□□□□□ -1.12
VPS25-204ENST00000589577 MED23Q9ULK4 1368 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms