RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 MYO3BQ8WXR4 1341 aa12.51□□□□□ -0.41
CNN1-207ENST00000588468 TMEM88BA6NKF7 163 aa12.5□□□□□ -0.41
CNN1-207ENST00000588468 LDHAL6AQ6ZMR3 332 aa12.5□□□□□ -0.41
CNN1-207ENST00000588468 ANKRD44Q8N8A2 993 aa12.5□□□□□ -0.41
CNN1-207ENST00000588468 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
CNN1-207ENST00000588468 NOB1Q9ULX3 412 aaKnown RBP12.5□□□□□ -0.41
CNN1-207ENST00000588468 HDAC5Q9UQL6 1122 aa12.5□□□□□ -0.41
CNN1-207ENST00000588468 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
CNN1-207ENST00000588468 IRS2Q9Y4H2 1338 aa12.5□□□□□ -0.41
CNN1-207ENST00000588468 CNTNAP1P78357 1384 aa12.5□□□□□ -0.41
CNN1-207ENST00000588468 IPO8O15397 1037 aaKnown RBP12.49□□□□□ -0.41
CNN1-207ENST00000588468 MMP14P50281 582 aa12.49□□□□□ -0.41
CNN1-207ENST00000588468 ZNF280AP59817 542 aaPredicted RBP12.49□□□□□ -0.41
CNN1-207ENST00000588468 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
CNN1-207ENST00000588468 GMLQ99445 158 aa12.49□□□□□ -0.41
CNN1-207ENST00000588468 KCNQ5Q9NR82 932 aa12.49□□□□□ -0.41
CNN1-207ENST00000588468 MROH5Q6ZUA9 1318 aa12.48□□□□□ -0.41
CNN1-207ENST00000588468 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
CNN1-207ENST00000588468 WTIPA6NIX2 430 aaPredicted RBP12.48□□□□□ -0.41
CNN1-207ENST00000588468 UBTFL1P0CB47 393 aaPredicted RBP12.48□□□□□ -0.41
CNN1-207ENST00000588468 KLRK1P26718 216 aa12.48□□□□□ -0.41
CNN1-207ENST00000588468 KIF4BQ2VIQ3 1234 aa12.48□□□□□ -0.41
CNN1-207ENST00000588468 DACT2Q5SW24 774 aa12.48□□□□□ -0.41
CNN1-207ENST00000588468 ZNF804AQ7Z570 1209 aa12.48□□□□□ -0.41
CNN1-207ENST00000588468 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
CNN1-207ENST00000588468 USP17L8P0C7I0 530 aa12.47□□□□□ -0.41
CNN1-207ENST00000588468 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
CNN1-207ENST00000588468 UBE4AQ14139 1066 aa12.47□□□□□ -0.41
CNN1-207ENST00000588468 TBC1D10BQ4KMP7 808 aaPredicted RBP12.47□□□□□ -0.41
CNN1-207ENST00000588468 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
CNN1-207ENST00000588468 SAMD7Q7Z3H4 446 aa12.47□□□□□ -0.41
CNN1-207ENST00000588468 TXNRD3Q86VQ6 643 aa12.47□□□□□ -0.41
CNN1-207ENST00000588468 RASSF10A6NK89 507 aa12.46□□□□□ -0.41
CNN1-207ENST00000588468 TAF5LO75529 589 aa12.46□□□□□ -0.41
CNN1-207ENST00000588468 ATF7IPQ6VMQ6 1270 aa12.46□□□□□ -0.41
CNN1-207ENST00000588468 CDC37L1Q7L3B6 337 aa12.46□□□□□ -0.41
CNN1-207ENST00000588468 HELBQ8NG08 1087 aaPredicted RBP12.46□□□□□ -0.41
CNN1-207ENST00000588468 GLIS2Q9BZE0 524 aaPredicted RBP12.46□□□□□ -0.41
CNN1-207ENST00000588468 CD209Q9NNX6 404 aa12.46□□□□□ -0.41
CNN1-207ENST00000588468 RIPOR2Q9Y4F9 1068 aa12.46□□□□□ -0.41
CNN1-207ENST00000588468 PITPNM2Q9BZ72 1349 aa12.45□□□□□ -0.42
CNN1-207ENST00000588468 TRAF5O00463 557 aa12.45□□□□□ -0.42
CNN1-207ENST00000588468 EGFRP00533 1210 aa12.45□□□□□ -0.42
CNN1-207ENST00000588468 TRIM27P14373 513 aa12.45□□□□□ -0.42
CNN1-207ENST00000588468 IL1R1P14778 569 aa12.45□□□□□ -0.42
CNN1-207ENST00000588468 FKBP1AP62942 108 aaKnown RBP12.45□□□□□ -0.42
CNN1-207ENST00000588468 OGFOD1Q8N543 542 aa12.45□□□□□ -0.42
CNN1-207ENST00000588468 DCPSQ96C86 337 aaKnown RBP12.45□□□□□ -0.42
CNN1-207ENST00000588468 MYOZ2Q9NPC6 264 aa12.45□□□□□ -0.42
CNN1-207ENST00000588468 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
CNN1-207ENST00000588468 PAPPA2Q9BXP8 1791 aa12.44□□□□□ -0.42
CNN1-207ENST00000588468 SNAP23O00161 211 aa12.44□□□□□ -0.42
CNN1-207ENST00000588468 GNAI3P08754 354 aa12.44□□□□□ -0.42
CNN1-207ENST00000588468 METTL24Q5JXM2 366 aa12.44□□□□□ -0.42
CNN1-207ENST00000588468 TTLL5Q6EMB2 1281 aa12.44□□□□□ -0.42
CNN1-207ENST00000588468 KRT26Q7Z3Y9 468 aa12.44□□□□□ -0.42
CNN1-207ENST00000588468 VGLL2Q8N8G2 317 aa12.44□□□□□ -0.42
CNN1-207ENST00000588468 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
CNN1-207ENST00000588468 PUS3Q9BZE2 481 aaKnown RBP12.44□□□□□ -0.42
CNN1-207ENST00000588468 GGA3Q9NZ52 723 aa12.44□□□□□ -0.42
CNN1-207ENST00000588468 MKRN1Q9UHC7 482 aaKnown RBP12.44□□□□□ -0.42
CNN1-207ENST00000588468 COL1A1P02452 1464 aaPredicted RBP12.43□□□□□ -0.42
CNN1-207ENST00000588468 EYA2O00167 538 aa12.43□□□□□ -0.42
CNN1-207ENST00000588468 PLIN1O60240 522 aa12.43□□□□□ -0.42
CNN1-207ENST00000588468 BCAR3O75815 825 aa12.43□□□□□ -0.42
CNN1-207ENST00000588468 RFX5P48382 616 aaPredicted RBP12.43□□□□□ -0.42
CNN1-207ENST00000588468 GTF2IP78347 998 aa12.43□□□□□ -0.42
CNN1-207ENST00000588468 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
CNN1-207ENST00000588468 ZKSCAN2Q63HK3 967 aa12.43□□□□□ -0.42
CNN1-207ENST00000588468 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
CNN1-207ENST00000588468 MEIS3Q99687 375 aa12.43□□□□□ -0.42
CNN1-207ENST00000588468 HDAC9Q9UKV0 1011 aa12.43□□□□□ -0.42
CNN1-207ENST00000588468 ABT1Q9ULW3 272 aaKnown RBP12.43□□□□□ -0.42
CNN1-207ENST00000588468 LRRFIP2Q9Y608 721 aaKnown RBP12.43□□□□□ -0.42
CNN1-207ENST00000588468 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
CNN1-207ENST00000588468 CIAO1O76071 339 aa12.42□□□□□ -0.42
CNN1-207ENST00000588468 PDE8BO95263 885 aa12.42□□□□□ -0.42
CNN1-207ENST00000588468 CELF2O95319 508 aaKnown RBP12.42□□□□□ -0.42
CNN1-207ENST00000588468 PTPN12Q05209 780 aaKnown RBP12.42□□□□□ -0.42
CNN1-207ENST00000588468 MTX1Q13505 466 aa12.42□□□□□ -0.42
CNN1-207ENST00000588468 PUM3Q15397 648 aaKnown RBP12.42□□□□□ -0.42
CNN1-207ENST00000588468 RBM26Q5T8P6 1007 aaKnown RBP12.42□□□□□ -0.42
CNN1-207ENST00000588468 CST9Q5W186 159 aa12.42□□□□□ -0.42
CNN1-207ENST00000588468 FRAT1Q92837 279 aaPredicted RBP12.42□□□□□ -0.42
CNN1-207ENST00000588468 HHIPL1Q96JK4 782 aa12.42□□□□□ -0.42
CNN1-207ENST00000588468 TLL2Q9Y6L7 1015 aa12.42□□□□□ -0.42
CNN1-207ENST00000588468 IFIT1P09914 478 aaKnown RBP12.41□□□□□ -0.42
CNN1-207ENST00000588468 HIBADHP31937 336 aaKnown RBP12.41□□□□□ -0.42
CNN1-207ENST00000588468 ECE1P42892 770 aa12.41□□□□□ -0.42
CNN1-207ENST00000588468 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
CNN1-207ENST00000588468 SCARF1Q14162 830 aa12.41□□□□□ -0.42
CNN1-207ENST00000588468 DEFB115Q30KQ5 88 aa12.41□□□□□ -0.42
CNN1-207ENST00000588468 USP48Q86UV5 1035 aa12.41□□□□□ -0.42
CNN1-207ENST00000588468 TDRD7Q8NHU6 1098 aaKnown RBP12.41□□□□□ -0.42
CNN1-207ENST00000588468 KLHDC4Q8TBB5 520 aa12.41□□□□□ -0.42
CNN1-207ENST00000588468 MXD3Q9BW11 206 aa12.41□□□□□ -0.42
CNN1-207ENST00000588468 ADM5C9JUS6 153 aa12.4□□□□□ -0.42
CNN1-207ENST00000588468 SASH1O94885 1247 aa12.4□□□□□ -0.42
CNN1-207ENST00000588468 VEGFBP49765 207 aa12.4□□□□□ -0.42
CNN1-207ENST00000588468 CAVIN4Q5BKX8 364 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms