RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 ALDH8A1Q9H2A2 487 aaPredicted RBP13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 DDX21Q9NR30 783 aaKnown RBP eCLIP13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 PDIA6Q15084 440 aa13.02□□□□□ -0.33
RUNDC3A-203ENST00000587483 PTPN14Q15678 1187 aa13.02□□□□□ -0.33
RUNDC3A-203ENST00000587483 HEG1Q9ULI3 1381 aa13.02□□□□□ -0.33
RUNDC3A-203ENST00000587483 DMTNQ08495 405 aa13.02□□□□□ -0.33
RUNDC3A-203ENST00000587483 USP28Q96RU2 1077 aa13.02□□□□□ -0.33
RUNDC3A-203ENST00000587483 IFIT1P09914 478 aaKnown RBP13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 SCRN1Q12765 414 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 GCKRQ14397 625 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 TNNI3KQ59H18 835 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 ZNF790Q6PG37 636 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 FPGT-TNNI3KV9GXZ4 949 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 JCADQ9P266 1359 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 TATP17735 454 aaPredicted RBP13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 MCMDC2Q4G0Z9 681 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 PDILTQ8N807 584 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 NEURL1BA8MQ27 555 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 TMC6Q7Z403 805 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 KCNH5Q8NCM2 988 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 TRERF1Q96PN7 1200 aa13.01□□□□□ -0.33
RUNDC3A-203ENST00000587483 USP27XA6NNY8 438 aa13□□□□□ -0.33
RUNDC3A-203ENST00000587483 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
RUNDC3A-203ENST00000587483 NCBP1Q09161 790 aaKnown RBP13□□□□□ -0.33
RUNDC3A-203ENST00000587483 KRT32Q14532 448 aa13□□□□□ -0.33
RUNDC3A-203ENST00000587483 USPL1Q5W0Q7 1092 aa13□□□□□ -0.33
RUNDC3A-203ENST00000587483 ZNF609O15014 1411 aa13□□□□□ -0.33
RUNDC3A-203ENST00000587483 CCDC69A6NI79 296 aa13□□□□□ -0.33
RUNDC3A-203ENST00000587483 RALYLQ86SE5 291 aaKnown RBP13□□□□□ -0.33
RUNDC3A-203ENST00000587483 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
RUNDC3A-203ENST00000587483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13□□□□□ -0.33
RUNDC3A-203ENST00000587483 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
RUNDC3A-203ENST00000587483 NCAPD2Q15021 1401 aa12.99□□□□□ -0.33
RUNDC3A-203ENST00000587483 KRT28Q7Z3Y7 464 aa12.99□□□□□ -0.33
RUNDC3A-203ENST00000587483 CEP57L1Q8IYX8 460 aa12.99□□□□□ -0.33
RUNDC3A-203ENST00000587483 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
RUNDC3A-203ENST00000587483 ZNF396Q96N95 335 aaPredicted RBP12.99□□□□□ -0.33
RUNDC3A-203ENST00000587483 KAT6BQ8WYB5 2073 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 SMTNL1A8MU46 457 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 ATP5JP18859 108 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 STOX1Q6ZVD7 989 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 GOLPH3LQ9H4A5 285 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 A1BGP04217 495 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 GOLGA8FQ08AF8 430 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 GOLGA8DPQ0D2H9 430 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 IQCB1Q15051 598 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 LRRC24Q50LG9 513 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 TTC39AQ5SRH9 613 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 GOLGA8BA8MQT2 603 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 GPTP24298 496 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 UTP14CQ5TAP6 766 aaKnown RBP12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 PAG1Q9NWQ8 432 aa12.98□□□□□ -0.33
RUNDC3A-203ENST00000587483 KLF18A0A0U1RQI7 1052 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 NRDCO43847 1150 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 SERPINC1P01008 464 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 SPECC1Q5M775 1068 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 IFNKQ9P0W0 207 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 IDH1O75874 414 aaKnown RBP12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 ATF3P18847 181 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 ADD1P35611 737 aaKnown RBP12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 STX1AQ16623 288 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 ARHGEF25Q86VW2 580 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 PUS3Q9BZE2 481 aaKnown RBP12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 PI16Q6UXB8 463 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 DHX32Q7L7V1 743 aaKnown RBP12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 LRRC8AQ8IWT6 810 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 COPRSQ9NQ92 184 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 CEP126Q9P2H0 1117 aa12.97□□□□□ -0.33
RUNDC3A-203ENST00000587483 MRC1P22897 1456 aa12.96□□□□□ -0.33
RUNDC3A-203ENST00000587483 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
RUNDC3A-203ENST00000587483 NSUN7Q8NE18 718 aaKnown RBP12.96□□□□□ -0.33
RUNDC3A-203ENST00000587483 METTL22Q9BUU2 404 aaPredicted RBP12.96□□□□□ -0.33
RUNDC3A-203ENST00000587483 ANO10Q9NW15 660 aa12.96□□□□□ -0.33
RUNDC3A-203ENST00000587483 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
RUNDC3A-203ENST00000587483 C5P01031 1676 aa12.96□□□□□ -0.33
RUNDC3A-203ENST00000587483 SIPA1L3O60292 1781 aaPredicted RBP12.96□□□□□ -0.33
RUNDC3A-203ENST00000587483 CTDNEP1O95476 244 aa12.96□□□□□ -0.34
RUNDC3A-203ENST00000587483 TTLL7Q6ZT98 887 aa12.96□□□□□ -0.34
RUNDC3A-203ENST00000587483 SMARCC2Q8TAQ2 1214 aa12.96□□□□□ -0.34
RUNDC3A-203ENST00000587483 CGNQ9P2M7 1197 aaKnown RBP12.96□□□□□ -0.34
RUNDC3A-203ENST00000587483 LAMA4Q16363 1823 aa12.96□□□□□ -0.34
RUNDC3A-203ENST00000587483 MICU3Q86XE3 530 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 NAT10Q9H0A0 1025 aaKnown RBP12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 OVOS2A0A0G2JMS6 1433 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 MYH15Q9Y2K3 1946 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 TPM4P67936 248 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 TRDNQ13061 729 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 ELF2Q15723 593 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 SYT10Q6XYQ8 523 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 PFKFB2O60825 505 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms