RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 NEUROD1Q13562 356 aa6.97□□□□□ -1.29
TUBD1-207ENST00000587476 TPTE2Q6XPS3 522 aa6.97□□□□□ -1.29
TUBD1-207ENST00000587476 CRIPAKQ8N1N5 446 aa6.97□□□□□ -1.29
TUBD1-207ENST00000587476 SPACA7Q96KW9 195 aa6.97□□□□□ -1.29
TUBD1-207ENST00000587476 CNTNAP3BQ96NU0 1288 aa6.97□□□□□ -1.29
TUBD1-207ENST00000587476 CNTNAP3Q9BZ76 1288 aa6.97□□□□□ -1.29
TUBD1-207ENST00000587476 ZSWIM4Q9H7M6 989 aa6.97□□□□□ -1.29
TUBD1-207ENST00000587476 STRIP2Q9ULQ0 834 aa6.97□□□□□ -1.29
TUBD1-207ENST00000587476 FBXO24O75426 580 aa6.96□□□□□ -1.3
TUBD1-207ENST00000587476 THBS1P07996 1170 aa6.96□□□□□ -1.3
TUBD1-207ENST00000587476 NFX1Q12986 1120 aaKnown RBP6.96□□□□□ -1.3
TUBD1-207ENST00000587476 MAP3K11Q16584 847 aa6.96□□□□□ -1.3
TUBD1-207ENST00000587476 NBPF6Q5VWK0 638 aa6.96□□□□□ -1.3
TUBD1-207ENST00000587476 ZNF296Q8WUU4 475 aaPredicted RBP6.96□□□□□ -1.3
TUBD1-207ENST00000587476 RHOVQ96L33 236 aa6.96□□□□□ -1.3
TUBD1-207ENST00000587476 NBPF4Q96M43 638 aa6.96□□□□□ -1.3
TUBD1-207ENST00000587476 TRIM56Q9BRZ2 755 aaKnown RBP6.96□□□□□ -1.3
TUBD1-207ENST00000587476 DACH1Q9UI36 760 aa6.96□□□□□ -1.3
TUBD1-207ENST00000587476 SUPT16HQ9Y5B9 1047 aaKnown RBP6.96□□□□□ -1.3
TUBD1-207ENST00000587476 TLDC2A0PJX2 215 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 CDK11BP21127 795 aaKnown RBP6.95□□□□□ -1.3
TUBD1-207ENST00000587476 ITPKAP23677 461 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 NASPP49321 788 aaPredicted RBP6.95□□□□□ -1.3
TUBD1-207ENST00000587476 LIG3P49916 1009 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 COL9A2Q14055 689 aaPredicted RBP6.95□□□□□ -1.3
TUBD1-207ENST00000587476 UBAP2LQ14157 1087 aaKnown RBP6.95□□□□□ -1.3
TUBD1-207ENST00000587476 COL13A1Q5TAT6 717 aaPredicted RBP6.95□□□□□ -1.3
TUBD1-207ENST00000587476 DHX32Q7L7V1 743 aaKnown RBP6.95□□□□□ -1.3
TUBD1-207ENST00000587476 CEP120Q8N960 986 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 PHC3Q8NDX5 983 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 BHMTQ93088 406 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 GMCL1Q96IK5 515 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 NT5C1AQ9BXI3 368 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 BHLHE41Q9C0J9 482 aaPredicted RBP6.95□□□□□ -1.3
TUBD1-207ENST00000587476 KCNQ5Q9NR82 932 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 STRN4Q9NRL3 753 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 DZANK1Q9NVP4 752 aa6.95□□□□□ -1.3
TUBD1-207ENST00000587476 CDK11AQ9UQ88 783 aaPredicted RBP6.95□□□□□ -1.3
TUBD1-207ENST00000587476 SLC35F4A4IF30 521 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 F6X3S4 739 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 BNIP3LO60238 219 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 GRIA4P48058 902 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 NRLP54845 237 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 PTSQ03393 145 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 RPS26P11Q5JNZ5 115 aaPredicted RBP6.94□□□□□ -1.3
TUBD1-207ENST00000587476 SNAP47Q5SQN1 464 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 TRIM22Q8IYM9 498 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 TMEM102Q8N9M5 508 aaPredicted RBP6.94□□□□□ -1.3
TUBD1-207ENST00000587476 EAF1Q96JC9 268 aaPredicted RBP6.94□□□□□ -1.3
TUBD1-207ENST00000587476 NSUN5Q96P11 429 aaKnown RBP6.94□□□□□ -1.3
TUBD1-207ENST00000587476 SLC30A3Q99726 388 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 PIF1Q9H611 641 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 NDFIP2Q9NV92 336 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 ATXN7L1Q9ULK2 861 aaPredicted RBP6.94□□□□□ -1.3
TUBD1-207ENST00000587476 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
TUBD1-207ENST00000587476 CELA3AP09093 270 aa6.93□□□□□ -1.3
TUBD1-207ENST00000587476 ACPPP15309 386 aa6.93□□□□□ -1.3
TUBD1-207ENST00000587476 CD33P20138 364 aa6.93□□□□□ -1.3
TUBD1-207ENST00000587476 GPLD1P80108 840 aa6.93□□□□□ -1.3
TUBD1-207ENST00000587476 LMNB2Q03252 620 aa6.93□□□□□ -1.3
TUBD1-207ENST00000587476 ABHD17AQ96GS6 310 aa6.93□□□□□ -1.3
TUBD1-207ENST00000587476 NECAB3Q96P71 396 aaPredicted RBP6.93□□□□□ -1.3
TUBD1-207ENST00000587476 GINM1Q9NU53 330 aa6.93□□□□□ -1.3
TUBD1-207ENST00000587476 PHF24Q9UPV7 400 aa6.93□□□□□ -1.3
TUBD1-207ENST00000587476 A0A096LPE4 126 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 A0A1W2PPZ6 126 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 PF4P02776 101 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 SOX9P48436 509 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 RPS26P62854 115 aaKnown RBP6.92□□□□□ -1.3
TUBD1-207ENST00000587476 FAM160A1Q05DH4 1040 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 BMS1Q14692 1282 aaKnown RBP6.92□□□□□ -1.3
TUBD1-207ENST00000587476 GRIN2CQ14957 1233 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 PCSK7Q16549 785 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 DBN1Q16643 649 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 FAM182BQ5T319 152 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 TTBK2Q6IQ55 1244 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 FBXL19Q6PCT2 694 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 RAB44Q7Z6P3 723 aaPredicted RBP6.92□□□□□ -1.3
TUBD1-207ENST00000587476 MRFAP1L1Q96HT8 127 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 RBSNQ9H1K0 784 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 ZNF408Q9H9D4 720 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 ATP13A2Q9NQ11 1180 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
TUBD1-207ENST00000587476 GPN3Q9UHW5 284 aaPredicted RBP6.92□□□□□ -1.3
TUBD1-207ENST00000587476 LOC102724428A0A0B4J2F2 783 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 ANKRD62A6NC57 917 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
TUBD1-207ENST00000587476 ENC1O14682 589 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 GREM1O60565 184 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 TRPA1O75762 1119 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 GHRHP01286 108 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 LMNB1P20700 586 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 GARTP22102 1010 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 SIK1P57059 783 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 APOBRQ0VD83 1088 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 CAMK2GQ13555 558 aaPredicted RBP6.91□□□□□ -1.3
TUBD1-207ENST00000587476 SPRED3Q2MJR0 410 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 AGMOQ6ZNB7 445 aa6.91□□□□□ -1.3
TUBD1-207ENST00000587476 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms