RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 LRRC4BQ9NT99 713 aa26.69■■□□□ 1.86
CIRBP-208ENST00000586548 UBR3Q6ZT12 1888 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 MCM4P33991 863 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 RFC4P35249 363 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 NUCB2P80303 420 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 SLC27A3Q5K4L6 730 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 VPS53Q5VIR6 699 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 CCDC102BQ68D86 513 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 NBPF5PQ86XG9 351 aaPredicted RBP26.68■■□□□ 1.86
CIRBP-208ENST00000586548 ZGPATQ8N5A5 531 aaKnown RBP26.68■■□□□ 1.86
CIRBP-208ENST00000586548 TNPO1Q92973 898 aaKnown RBP26.68■■□□□ 1.86
CIRBP-208ENST00000586548 A0A1B0GUL6 1792 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 AK2P54819 239 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 C3orf67Q6ZVT6 689 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 RUFY3Q7L099 469 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 DSCC1Q9BVC3 393 aa26.68■■□□□ 1.86
CIRBP-208ENST00000586548 COL4A1P02462 1669 aa26.67■■□□□ 1.86
CIRBP-208ENST00000586548 TTF1Q15361 905 aaPredicted RBP26.67■■□□□ 1.86
CIRBP-208ENST00000586548 NOL8Q76FK4 1167 aaKnown RBP26.67■■□□□ 1.86
CIRBP-208ENST00000586548 MAST3O60307 1309 aa26.66■■□□□ 1.86
CIRBP-208ENST00000586548 PHKA1P46020 1223 aa26.66■■□□□ 1.86
CIRBP-208ENST00000586548 KRT32Q14532 448 aa26.66■■□□□ 1.86
CIRBP-208ENST00000586548 TPTE2Q6XPS3 522 aa26.66■■□□□ 1.86
CIRBP-208ENST00000586548 ANKRD18AQ8IVF6 992 aa26.66■■□□□ 1.86
CIRBP-208ENST00000586548 PDRG1Q9NUG6 133 aa26.66■■□□□ 1.86
CIRBP-208ENST00000586548 CHRNDQ07001 517 aa26.65■■□□□ 1.86
CIRBP-208ENST00000586548 PI16Q6UXB8 463 aa26.65■■□□□ 1.86
CIRBP-208ENST00000586548 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.65■■□□□ 1.861e-7■■■□□ 16.4
CIRBP-208ENST00000586548 LIMCH1Q9UPQ0 1083 aa26.65■■□□□ 1.86
CIRBP-208ENST00000586548 PHF14O94880 888 aa26.64■■□□□ 1.85
CIRBP-208ENST00000586548 RBM6P78332 1123 aaKnown RBP26.64■■□□□ 1.85
CIRBP-208ENST00000586548 SLFNL1Q499Z3 407 aa26.64■■□□□ 1.85
CIRBP-208ENST00000586548 ZSCAN25Q6NSZ9 544 aa26.64■■□□□ 1.85
CIRBP-208ENST00000586548 GBP4Q96PP9 640 aa26.64■■□□□ 1.85
CIRBP-208ENST00000586548 CYP2E1P05181 493 aaPredicted RBP26.63■■□□□ 1.85
CIRBP-208ENST00000586548 CPA1P15085 419 aa26.63■■□□□ 1.85
CIRBP-208ENST00000586548 APPBP2Q92624 585 aa26.63■■□□□ 1.85
CIRBP-208ENST00000586548 NLRP3Q96P20 1036 aa26.63■■□□□ 1.85
CIRBP-208ENST00000586548 BSDC1Q9NW68 430 aaPredicted RBP26.63■■□□□ 1.85
CIRBP-208ENST00000586548 RGS17Q9UGC6 210 aaPredicted RBP26.63■■□□□ 1.85
CIRBP-208ENST00000586548 TRIM37O94972 964 aa26.62■■□□□ 1.85
CIRBP-208ENST00000586548 OSBP2Q969R2 916 aa26.62■■□□□ 1.85
CIRBP-208ENST00000586548 CARMIL3Q8ND23 1372 aa26.62■■□□□ 1.85
CIRBP-208ENST00000586548 M0R2C6 588 aa26.62■■□□□ 1.85
CIRBP-208ENST00000586548 HMGB2P26583 209 aaKnown RBP26.62■■□□□ 1.85
CIRBP-208ENST00000586548 BLOC1S2Q6QNY1 142 aa26.62■■□□□ 1.85
CIRBP-208ENST00000586548 CLEC17AQ6ZS10 378 aa26.62■■□□□ 1.85
CIRBP-208ENST00000586548 ALDH8A1Q9H2A2 487 aaPredicted RBP26.62■■□□□ 1.85
CIRBP-208ENST00000586548 DDX11L8A8MPP1 907 aa26.61■■□□□ 1.85
CIRBP-208ENST00000586548 TAF1P21675 1872 aa26.61■■□□□ 1.85
CIRBP-208ENST00000586548 HSPD1P10809 573 aaKnown RBP26.6■■□□□ 1.85
CIRBP-208ENST00000586548 WASHC4Q2M389 1173 aa26.6■■□□□ 1.85
CIRBP-208ENST00000586548 ZSCAN31Q96LW9 406 aaPredicted RBP26.6■■□□□ 1.85
CIRBP-208ENST00000586548 TAF6LQ9Y6J9 622 aa26.6■■□□□ 1.85
CIRBP-208ENST00000586548 DOCK2Q92608 1830 aa26.6■■□□□ 1.85
CIRBP-208ENST00000586548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.59■■□□□ 1.85
CIRBP-208ENST00000586548 CYP21A2P08686 494 aa26.59■■□□□ 1.85
CIRBP-208ENST00000586548 RPS6KB1P23443 525 aa26.59■■□□□ 1.85
CIRBP-208ENST00000586548 SNAP23O00161 211 aa26.59■■□□□ 1.85
CIRBP-208ENST00000586548 ADD2P35612 726 aa26.59■■□□□ 1.85
CIRBP-208ENST00000586548 SPATA5Q8NB90 893 aa26.59■■□□□ 1.85
CIRBP-208ENST00000586548 PIH1D3Q9NQM4 214 aaKnown RBP26.59■■□□□ 1.85
CIRBP-208ENST00000586548 SH2B1Q9NRF2 756 aaPredicted RBP26.59■■□□□ 1.85
CIRBP-208ENST00000586548 MYO5AQ9Y4I1 1855 aaKnown RBP26.58■■□□□ 1.85
CIRBP-208ENST00000586548 ANKRD1Q15327 319 aa26.58■■□□□ 1.85
CIRBP-208ENST00000586548 TNRC6CQ9HCJ0 1690 aaKnown RBP26.57■■□□□ 1.84
CIRBP-208ENST00000586548 UBE4AQ14139 1066 aa26.57■■□□□ 1.84
CIRBP-208ENST00000586548 NFIXQ14938 502 aa26.57■■□□□ 1.84
CIRBP-208ENST00000586548 UBE3CQ15386 1083 aa26.57■■□□□ 1.84
CIRBP-208ENST00000586548 CELF1Q92879 486 aaKnown RBP26.57■■□□□ 1.84
CIRBP-208ENST00000586548 RASGRF1Q13972 1273 aa26.56■■□□□ 1.84
CIRBP-208ENST00000586548 NEK1Q96PY6 1258 aa26.56■■□□□ 1.84
CIRBP-208ENST00000586548 MINPP1Q9UNW1 487 aa26.56■■□□□ 1.84
CIRBP-208ENST00000586548 POTEAQ6S8J7 498 aa26.56■■□□□ 1.84
CIRBP-208ENST00000586548 RPS8P62241 208 aaKnown RBP26.55■■□□□ 1.84
CIRBP-208ENST00000586548 SLC9C2Q5TAH2 1124 aa26.55■■□□□ 1.84
CIRBP-208ENST00000586548 PUS7LQ9H0K6 701 aaKnown RBP26.55■■□□□ 1.84
CIRBP-208ENST00000586548 NPHP1O15259 732 aa26.54■■□□□ 1.84
CIRBP-208ENST00000586548 IDH1O75874 414 aaKnown RBP26.54■■□□□ 1.84
CIRBP-208ENST00000586548 PTMSP20962 102 aa26.54■■□□□ 1.84
CIRBP-208ENST00000586548 RXRBP28702 533 aa26.54■■□□□ 1.84
CIRBP-208ENST00000586548 PKP1Q13835 747 aa26.54■■□□□ 1.84
CIRBP-208ENST00000586548 CTNNA3Q9UI47 895 aa26.54■■□□□ 1.84
CIRBP-208ENST00000586548 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.54■■□□□ 1.84
CIRBP-208ENST00000586548 LAMA4Q16363 1823 aa26.54■■□□□ 1.84
CIRBP-208ENST00000586548 ZNF804BA4D1E1 1349 aa26.54■■□□□ 1.84
CIRBP-208ENST00000586548 BCAMP50895 628 aa26.53■■□□□ 1.84
CIRBP-208ENST00000586548 LARGE1O95461 756 aa26.53■■□□□ 1.84
CIRBP-208ENST00000586548 HMGB1P09429 215 aaKnown RBP26.53■■□□□ 1.84
CIRBP-208ENST00000586548 PDE6AP16499 860 aa26.53■■□□□ 1.84
CIRBP-208ENST00000586548 TXNRD1Q16881 649 aa26.53■■□□□ 1.84
CIRBP-208ENST00000586548 CNBD1Q8NA66 436 aa26.53■■□□□ 1.84
CIRBP-208ENST00000586548 GPAA1O43292 621 aa26.52■■□□□ 1.84
CIRBP-208ENST00000586548 GYS1P13807 737 aa26.52■■□□□ 1.84
CIRBP-208ENST00000586548 COL9A3Q14050 684 aaPredicted RBP26.52■■□□□ 1.84
CIRBP-208ENST00000586548 LARP6Q9BRS8 491 aaKnown RBP26.52■■□□□ 1.84
CIRBP-208ENST00000586548 ZDHHC9Q9Y397 364 aa26.52■■□□□ 1.84
CIRBP-208ENST00000586548 FOXP2O15409 715 aa26.51■■□□□ 1.83
CIRBP-208ENST00000586548 TM4SF1P30408 202 aa26.51■■□□□ 1.83
CIRBP-208ENST00000586548 CCDC24Q8N4L8 307 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms