RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 POLR3EQ9NVU0 708 aa7.54□□□□□ -1.2
CDH8-213ENST00000584966 PGPEP1Q9NXJ5 209 aa7.54□□□□□ -1.2
CDH8-213ENST00000584966 DOT1LQ8TEK3 1739 aa7.54□□□□□ -1.2
CDH8-213ENST00000584966 BTAF1O14981 1849 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 SENP3-EIF4A1A0A087X0R7 540 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 EXOC5O00471 708 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 ANP32CO43423 234 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 HMOX1P09601 288 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 RELBQ01201 579 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 DDB1Q16531 1140 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 FAM182BQ5T319 152 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 DIEXFQ68CQ4 756 aaKnown RBP7.53□□□□□ -1.2
CDH8-213ENST00000584966 PODNQ7Z5L7 613 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 TRMT44Q8IYL2 757 aaKnown RBP7.53□□□□□ -1.2
CDH8-213ENST00000584966 CFAP53Q96M91 514 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 PLEKHF1Q96S99 279 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 INSM2Q96T92 566 aaPredicted RBP7.53□□□□□ -1.2
CDH8-213ENST00000584966 ARID3AQ99856 593 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 POLMQ9NP87 494 aaPredicted RBP7.53□□□□□ -1.2
CDH8-213ENST00000584966 PLEKHG2Q9H7P9 1386 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 NHSQ6T4R5 1651 aa7.53□□□□□ -1.2
CDH8-213ENST00000584966 BCL9O00512 1426 aa7.52□□□□□ -1.2
CDH8-213ENST00000584966 CYP27B1O15528 508 aa7.52□□□□□ -1.21
CDH8-213ENST00000584966 TATP17735 454 aaPredicted RBP7.52□□□□□ -1.21
CDH8-213ENST00000584966 CLK2P49760 499 aaKnown RBP7.52□□□□□ -1.21
CDH8-213ENST00000584966 NEDD1Q8NHV4 660 aa7.52□□□□□ -1.21
CDH8-213ENST00000584966 ZCRB1Q8TBF4 217 aaKnown RBP7.52□□□□□ -1.21
CDH8-213ENST00000584966 PHACTR3Q96KR7 559 aa7.52□□□□□ -1.21
CDH8-213ENST00000584966 TBC1D2Q9BYX2 928 aa7.52□□□□□ -1.21
CDH8-213ENST00000584966 U2SURPO15042 1029 aaKnown RBP7.51□□□□□ -1.21
CDH8-213ENST00000584966 DIXDC1Q155Q3 683 aa7.51□□□□□ -1.21
CDH8-213ENST00000584966 RSBN1LQ6PCB5 846 aaPredicted RBP7.51□□□□□ -1.21
CDH8-213ENST00000584966 PNISRQ8TF01 805 aaKnown RBP7.51□□□□□ -1.21
CDH8-213ENST00000584966 RAPGEF4Q8WZA2 1011 aa7.51□□□□□ -1.21
CDH8-213ENST00000584966 TSC1Q92574 1164 aa7.51□□□□□ -1.21
CDH8-213ENST00000584966 CUEDC1Q9NWM3 386 aaPredicted RBP7.51□□□□□ -1.21
CDH8-213ENST00000584966 LY75O60449 1722 aa7.51□□□□□ -1.21
CDH8-213ENST00000584966 U2AF1L5P0DN76 240 aaPredicted RBP7.5□□□□□ -1.21
CDH8-213ENST00000584966 PHKG2P15735 406 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 BAG6P46379 1132 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 U2AF1Q01081 240 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDH8-213ENST00000584966 PDE3BQ13370 1112 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 MTHFSDQ2M296 383 aaKnown RBP7.5□□□□□ -1.21
CDH8-213ENST00000584966 SH3BP5LQ7L8J4 393 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 PTF1AQ7RTS3 328 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 ARMC2Q8NEN0 867 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 RNF217Q8TC41 542 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 ZBTB3Q9H5J0 574 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 NUDCQ9Y266 331 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 TAF1LQ8IZX4 1826 aa7.5□□□□□ -1.21
CDH8-213ENST00000584966 RGPD3A6NKT7 1758 aaPredicted RBP7.49□□□□□ -1.21
CDH8-213ENST00000584966 RGPD4Q7Z3J3 1758 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 FURINP09958 794 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 PRKAR2BP31323 418 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 AMOTQ4VCS5 1084 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 PLEKHO1Q53GL0 409 aaPredicted RBP7.49□□□□□ -1.21
CDH8-213ENST00000584966 NBPF14Q5TI25 921 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 FAM196AQ6ZSG2 479 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 BANK1Q8NDB2 785 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 DDX54Q8TDD1 881 aaKnown RBP7.49□□□□□ -1.21
CDH8-213ENST00000584966 POM121Q96HA1 1249 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 ZNF395Q9H8N7 513 aaPredicted RBP7.49□□□□□ -1.21
CDH8-213ENST00000584966 SPG7Q9UQ90 795 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 KDM6AO15550 1401 aaPredicted RBP7.49□□□□□ -1.21
CDH8-213ENST00000584966 PCDH11XQ9BZA7 1347 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 PCDH11YQ9BZA8 1340 aa7.49□□□□□ -1.21
CDH8-213ENST00000584966 RREB1Q92766 1687 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 CCER2I3L3R5 266 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 KCNQ2O43526 872 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 GJA5P36382 358 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 RFC5P40937 340 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 TUSC1Q2TAM9 212 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 PPP2R2DQ66LE6 453 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 IFNL2Q8IZJ0 200 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 CCDC82Q8N4S0 544 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 MRS2Q9HD23 443 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 MBIPQ9NS73 344 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 LIMD1Q9UGP4 676 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 UBR2Q8IWV8 1755 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 PAPPAQ13219 1627 aa7.48□□□□□ -1.21
CDH8-213ENST00000584966 GPR25O00155 361 aa7.47□□□□□ -1.21
CDH8-213ENST00000584966 BCRP11274 1271 aa7.47□□□□□ -1.21
CDH8-213ENST00000584966 CSPP1Q1MSJ5 1256 aa7.47□□□□□ -1.21
CDH8-213ENST00000584966 ERFEQ4G0M1 354 aa7.47□□□□□ -1.21
CDH8-213ENST00000584966 AKAP4Q5JQC9 854 aa7.47□□□□□ -1.21
CDH8-213ENST00000584966 ZNF530Q6P9A1 599 aaPredicted RBP7.47□□□□□ -1.21
CDH8-213ENST00000584966 KRTAP1-3Q8IUG1 177 aa7.47□□□□□ -1.21
CDH8-213ENST00000584966 LGR6Q9HBX8 967 aa7.47□□□□□ -1.21
CDH8-213ENST00000584966 KDM3BQ7LBC6 1761 aa7.46□□□□□ -1.21
CDH8-213ENST00000584966 TRIM37O94972 964 aa7.46□□□□□ -1.22
CDH8-213ENST00000584966 MPRIPQ6WCQ1 1025 aa7.46□□□□□ -1.22
CDH8-213ENST00000584966 CCDC146Q8IYE0 955 aa7.46□□□□□ -1.22
CDH8-213ENST00000584966 IL17REQ8NFR9 667 aa7.46□□□□□ -1.22
CDH8-213ENST00000584966 RUNDC1Q96C34 613 aa7.46□□□□□ -1.22
CDH8-213ENST00000584966 ACSBG1Q96GR2 724 aa7.46□□□□□ -1.22
CDH8-213ENST00000584966 MRC1P22897 1456 aa7.46□□□□□ -1.22
CDH8-213ENST00000584966 ZNF831Q5JPB2 1677 aa7.46□□□□□ -1.22
CDH8-213ENST00000584966 NUP188Q5SRE5 1749 aa7.46□□□□□ -1.22
CDH8-213ENST00000584966 MYH14Q7Z406 1995 aaKnown RBP7.46□□□□□ -1.22
CDH8-213ENST00000584966 CEMIPQ8WUJ3 1361 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms