RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 APPP05067 770 aa21.19■□□□□ 0.98
CUEDC1-212ENST00000584746 TTC39AQ5SRH9 613 aa21.19■□□□□ 0.98
CUEDC1-212ENST00000584746 H7C1W4 665 aa21.19■□□□□ 0.98
CUEDC1-212ENST00000584746 CCDC57Q2TAC2 916 aa21.19■□□□□ 0.98
CUEDC1-212ENST00000584746 SPDYE4A6NLX3 237 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 EYA2O00167 538 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 KRT32Q14532 448 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 GLIPR1L2Q4G1C9 344 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 XAGE2Q96GT9 111 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 MYL10Q9BUA6 226 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 CLSTN2Q9H4D0 955 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 AFDNP55196 1824 aaKnown RBP21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 PDIA3P30101 505 aaKnown RBP21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 DNAJC10Q8IXB1 793 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 ZNF710Q8N1W2 664 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 CCDC82Q8N4S0 544 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 CEP126Q9P2H0 1117 aa21.18■□□□□ 0.98
CUEDC1-212ENST00000584746 ILDR1Q86SU0 546 aaPredicted RBP21.17■□□□□ 0.98
CUEDC1-212ENST00000584746 KIAA1524Q8TCG1 905 aa21.17■□□□□ 0.98
CUEDC1-212ENST00000584746 RIOK3O14730 519 aaKnown RBP21.17■□□□□ 0.98
CUEDC1-212ENST00000584746 EVA1CP58658 441 aa21.17■□□□□ 0.98
CUEDC1-212ENST00000584746 HLFQ16534 295 aa21.17■□□□□ 0.98
CUEDC1-212ENST00000584746 SENP2Q9HC62 589 aa21.17■□□□□ 0.98
CUEDC1-212ENST00000584746 TRMT1Q9NXH9 659 aaKnown RBP21.17■□□□□ 0.98
CUEDC1-212ENST00000584746 CLIP2Q9UDT6 1046 aa21.17■□□□□ 0.98
CUEDC1-212ENST00000584746 SLIT3O75094 1523 aa21.16■□□□□ 0.98
CUEDC1-212ENST00000584746 ADD1P35611 737 aaKnown RBP21.16■□□□□ 0.98
CUEDC1-212ENST00000584746 FSIP1Q8NA03 581 aa21.16■□□□□ 0.98
CUEDC1-212ENST00000584746 PKNOX2Q96KN3 472 aa21.16■□□□□ 0.98
CUEDC1-212ENST00000584746 MARCKSP29966 332 aaPredicted RBP21.16■□□□□ 0.98
CUEDC1-212ENST00000584746 HSP90AA4PQ58FG1 418 aa21.16■□□□□ 0.98
CUEDC1-212ENST00000584746 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.16■□□□□ 0.98
CUEDC1-212ENST00000584746 CLIC4Q9Y696 253 aa21.16■□□□□ 0.98
CUEDC1-212ENST00000584746 V9GYY5 206 aaPredicted RBP21.16■□□□□ 0.98
CUEDC1-212ENST00000584746 RNF113AO15541 343 aaKnown RBP21.15■□□□□ 0.98
CUEDC1-212ENST00000584746 IDH1O75874 414 aaKnown RBP21.15■□□□□ 0.98
CUEDC1-212ENST00000584746 FGAP02671 866 aa21.15■□□□□ 0.98
CUEDC1-212ENST00000584746 KLF18A0A0U1RQI7 1052 aa21.15■□□□□ 0.98
CUEDC1-212ENST00000584746 FDPSP14324 419 aaKnown RBP21.15■□□□□ 0.98
CUEDC1-212ENST00000584746 CACTINQ8WUQ7 758 aaKnown RBP21.15■□□□□ 0.98
CUEDC1-212ENST00000584746 USP27XA6NNY8 438 aa21.15■□□□□ 0.98
CUEDC1-212ENST00000584746 CBX1P83916 185 aa21.15■□□□□ 0.98
CUEDC1-212ENST00000584746 ZMYM1Q5SVZ6 1142 aa21.15■□□□□ 0.98
CUEDC1-212ENST00000584746 GOLGA8BA8MQT2 603 aa21.14■□□□□ 0.97
CUEDC1-212ENST00000584746 FOXP2O15409 715 aa21.14■□□□□ 0.97
CUEDC1-212ENST00000584746 PALLDQ8WX93 1383 aa21.14■□□□□ 0.97
CUEDC1-212ENST00000584746 NPHP1O15259 732 aa21.14■□□□□ 0.97
CUEDC1-212ENST00000584746 PFKFB2O60825 505 aa21.14■□□□□ 0.97
CUEDC1-212ENST00000584746 IGSF3O75054 1194 aa21.14■□□□□ 0.97
CUEDC1-212ENST00000584746 IL15P40933 162 aaPredicted RBP21.14■□□□□ 0.97
CUEDC1-212ENST00000584746 TBC1D2BQ9UPU7 963 aa21.14■□□□□ 0.97
CUEDC1-212ENST00000584746 ZNF75DP51815 510 aa21.13■□□□□ 0.97
CUEDC1-212ENST00000584746 MYRIPQ8NFW9 859 aa21.13■□□□□ 0.97
CUEDC1-212ENST00000584746 PHKBQ93100 1093 aa21.13■□□□□ 0.97
CUEDC1-212ENST00000584746 SDF4Q9BRK5 362 aa21.13■□□□□ 0.97
CUEDC1-212ENST00000584746 GOLGA6L19H0YKK7 550 aa21.13■□□□□ 0.97
CUEDC1-212ENST00000584746 SF3A1Q15459 793 aaKnown RBP21.13■□□□□ 0.97
CUEDC1-212ENST00000584746 TSGA10IPQ3SY00 556 aa21.13■□□□□ 0.97
CUEDC1-212ENST00000584746 CHMP4CQ96CF2 233 aa21.13■□□□□ 0.97
CUEDC1-212ENST00000584746 GREM2Q9H772 168 aa21.13■□□□□ 0.97
CUEDC1-212ENST00000584746 ELP1O95163 1332 aa21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 SIPA1L3O60292 1781 aaPredicted RBP21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 BECN2A8MW95 431 aa21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 DDX19AQ9NUU7 478 aaKnown RBP21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 IQSEC3Q9UPP2 1182 aaPredicted RBP21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 USP54Q70EL1 1684 aa21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 DYNC1I1O14576 645 aa21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 PRC1O43663 620 aa21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 CMTR1Q8N1G2 835 aaKnown RBP21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 AOPEPQ8N6M6 819 aa21.12■□□□□ 0.97
CUEDC1-212ENST00000584746 EXOSC10Q01780 885 aaKnown RBP21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 METTL24Q5JXM2 366 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 NDUFA8P51970 172 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 CCDC158Q5M9N0 1113 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 ZSCAN25Q6NSZ9 544 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 CFAP45Q9UL16 551 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 PCDHA7Q9UN72 937 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 KIF28PB7ZC32 967 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 SNW1Q13573 536 aaKnown RBP21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 SPECC1Q5M775 1068 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 CCDC73Q6ZRK6 1079 aa21.11■□□□□ 0.97
CUEDC1-212ENST00000584746 KINO60870 393 aaKnown RBP21.1■□□□□ 0.97
CUEDC1-212ENST00000584746 LDHAL6AQ6ZMR3 332 aa21.1■□□□□ 0.97
CUEDC1-212ENST00000584746 MICU3Q86XE3 530 aa21.1■□□□□ 0.97
CUEDC1-212ENST00000584746 SCN11AQ9UI33 1791 aa21.1■□□□□ 0.97
CUEDC1-212ENST00000584746 CPLX1O14810 134 aa21.1■□□□□ 0.97
CUEDC1-212ENST00000584746 SMARCC2Q8TAQ2 1214 aa21.1■□□□□ 0.97
CUEDC1-212ENST00000584746 ZKSCAN3Q9BRR0 538 aa21.1■□□□□ 0.97
CUEDC1-212ENST00000584746 CNNM1Q9NRU3 951 aa21.1■□□□□ 0.97
CUEDC1-212ENST00000584746 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
CUEDC1-212ENST00000584746 SH3TC1Q8TE82 1336 aa21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 ORC3Q9UBD5 711 aaPredicted RBP21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 KIF3AQ9Y496 699 aa21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 MST1RQ04912 1400 aa21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 GOLGA6L6A8MZA4 724 aa21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 GPAA1O43292 621 aa21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 MCAMP43121 646 aa21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 SLC9C2Q5TAH2 1124 aa21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 BRINP3Q76B58 766 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms