RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 SCN4AP35499 1836 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 TRAF5O00463 557 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 TCERG1O14776 1098 aaKnown RBP7.07□□□□□ -1.28
VAPA-207ENST00000583879 MLLT1Q03111 559 aaPredicted RBP7.07□□□□□ -1.28
VAPA-207ENST00000583879 GRM1Q13255 1194 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 ZNF787Q6DD87 383 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 TTLL7Q6ZT98 887 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 HOMEZQ8IX15 550 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 NIM1KQ8IY84 436 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 ZNF34Q8IZ26 560 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 TSHZ2Q9NRE2 1034 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 ADARB2Q9NS39 739 aaKnown RBP7.07□□□□□ -1.28
VAPA-207ENST00000583879 FAM198AQ9UFP1 575 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 RRP7AQ9Y3A4 280 aaKnown RBP7.07□□□□□ -1.28
VAPA-207ENST00000583879 TLL2Q9Y6L7 1015 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 SNED1Q8TER0 1413 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 PPEF1O14829 653 aaPredicted RBP7.06□□□□□ -1.28
VAPA-207ENST00000583879 PPIP5K2O43314 1243 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 AOC2O75106 756 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 MYL6BP14649 208 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 GPTP24298 496 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 PPP2R1AP30153 589 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 GGCXP38435 758 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 EIF4A1P60842 406 aaKnown RBP7.06□□□□□ -1.28
VAPA-207ENST00000583879 CXCL9Q07325 125 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 SLC10A5Q5PT55 438 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 KIF6Q6ZMV9 814 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 PPP1R42Q7Z4L9 355 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 SAPCD2Q86UD0 394 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 ZNF516Q92618 1163 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 NECTIN2Q92692 538 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 NLRP3Q96P20 1036 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 TMX4Q9H1E5 349 aaPredicted RBP7.06□□□□□ -1.28
VAPA-207ENST00000583879 GPRC5DQ9NZD1 345 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 PGAP2Q9UHJ9 254 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 ZNRF3Q9ULT6 936 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 ATP6V0A2Q9Y487 856 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 ABCC12Q96J65 1359 aa7.06□□□□□ -1.28
VAPA-207ENST00000583879 ADAMTSL1Q8N6G6 1762 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 UBN2Q6ZU65 1347 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 CA12O43570 354 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 BBOX1O75936 387 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 CELF2O95319 508 aaKnown RBP7.05□□□□□ -1.28
VAPA-207ENST00000583879 NTSR2O95665 410 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 AOC3Q16853 763 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 GIGYF2Q6Y7W6 1299 aaKnown RBP7.05□□□□□ -1.28
VAPA-207ENST00000583879 CDC37L1Q7L3B6 337 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 SUPT20HQ8NEM7 779 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 ZC3H15Q8WU90 426 aaKnown RBP7.05□□□□□ -1.28
VAPA-207ENST00000583879 HHIPL1Q96JK4 782 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 RTFDC1Q9BY42 306 aaPredicted RBP7.05□□□□□ -1.28
VAPA-207ENST00000583879 ZBTB3Q9H5J0 574 aa7.05□□□□□ -1.28
VAPA-207ENST00000583879 COL4A5P29400 1685 aa7.04□□□□□ -1.28
VAPA-207ENST00000583879 GRXCR2A6NFK2 248 aa7.04□□□□□ -1.28
VAPA-207ENST00000583879 NEFMP07197 916 aa7.04□□□□□ -1.28
VAPA-207ENST00000583879 HIRAP54198 1017 aaPredicted RBP7.04□□□□□ -1.28
VAPA-207ENST00000583879 E2F4Q16254 413 aa7.04□□□□□ -1.28
VAPA-207ENST00000583879 PARP10Q53GL7 1025 aa7.04□□□□□ -1.28
VAPA-207ENST00000583879 NUDT18Q6ZVK8 323 aa7.04□□□□□ -1.28
VAPA-207ENST00000583879 SLC51AQ86UW1 340 aa7.04□□□□□ -1.28
VAPA-207ENST00000583879 SP8Q8IXZ3 490 aa7.04□□□□□ -1.28
VAPA-207ENST00000583879 UTP14AQ9BVJ6 771 aaKnown RBP7.04□□□□□ -1.28
VAPA-207ENST00000583879 GLIS2Q9BZE0 524 aaPredicted RBP7.04□□□□□ -1.28
VAPA-207ENST00000583879 IBTKQ9P2D0 1353 aaPredicted RBP7.04□□□□□ -1.28
VAPA-207ENST00000583879 SIPA1L3O60292 1781 aaPredicted RBP7.03□□□□□ -1.28
VAPA-207ENST00000583879 C3orf80F5H4A9 247 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 GMPSP49915 693 aaPredicted RBP7.03□□□□□ -1.28
VAPA-207ENST00000583879 BRPF1P55201 1214 aaPredicted RBP7.03□□□□□ -1.28
VAPA-207ENST00000583879 KIAA2012Q0VF49 1180 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 TNIP1Q15025 636 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 CIAPIN1Q6FI81 312 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 DPP8Q6V1X1 898 aaPredicted RBP7.03□□□□□ -1.28
VAPA-207ENST00000583879 MPNDQ8N594 471 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 PLEKHF1Q96S99 279 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 BCL2L13Q9BXK5 485 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 MCOLN1Q9GZU1 580 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 CNOT7Q9UIV1 285 aaKnown RBP7.03□□□□□ -1.28
VAPA-207ENST00000583879 BCORQ6W2J9 1755 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 ARFGEF2Q9Y6D5 1785 aa7.03□□□□□ -1.28
VAPA-207ENST00000583879 ABCC4O15439 1325 aa7.02□□□□□ -1.28
VAPA-207ENST00000583879 ERBB4Q15303 1308 aa7.02□□□□□ -1.28
VAPA-207ENST00000583879 RIC1Q4ADV7 1423 aa7.02□□□□□ -1.29
VAPA-207ENST00000583879 VIRMAQ69YN4 1812 aaKnown RBP7.02□□□□□ -1.29
VAPA-207ENST00000583879 H7C1D1 291 aa7.02□□□□□ -1.29
VAPA-207ENST00000583879 RAD17O75943 681 aa7.02□□□□□ -1.29
VAPA-207ENST00000583879 NOGQ13253 232 aa7.02□□□□□ -1.29
VAPA-207ENST00000583879 LRP10Q7Z4F1 713 aa7.02□□□□□ -1.29
VAPA-207ENST00000583879 NKX2-3Q8TAU0 364 aa7.02□□□□□ -1.29
VAPA-207ENST00000583879 THUMPD2Q9BTF0 503 aaKnown RBP7.02□□□□□ -1.29
VAPA-207ENST00000583879 ZNF408Q9H9D4 720 aa7.02□□□□□ -1.29
VAPA-207ENST00000583879 RBM27Q9P2N5 1060 aaKnown RBP7.02□□□□□ -1.29
VAPA-207ENST00000583879 CDHR2Q9BYE9 1310 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 EIF2S2P20042 333 aaKnown RBP7.01□□□□□ -1.29
VAPA-207ENST00000583879 SLC4A3P48751 1232 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 COPS2P61201 443 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 TCIRG1Q13488 830 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 DGKZQ13574 1117 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 GRAPQ13588 217 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 NFE2L2Q16236 605 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 HSP90AB3PQ58FF7 597 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms