RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 CFAP70Q5T0N1 1121 aa9.79□□□□□ -0.84
SMCHD1-207ENST00000581711 CLEC10AQ8IUN9 316 aa9.79□□□□□ -0.84
SMCHD1-207ENST00000581711 SHKBP1Q8TBC3 707 aa9.79□□□□□ -0.84
SMCHD1-207ENST00000581711 FAM83CQ9BQN1 747 aa9.79□□□□□ -0.84
SMCHD1-207ENST00000581711 FAM13BQ9NYF5 915 aa9.79□□□□□ -0.84
SMCHD1-207ENST00000581711 TNFRSF10BO14763 440 aa9.78□□□□□ -0.84
SMCHD1-207ENST00000581711 PRMT3O60678 531 aa9.78□□□□□ -0.84
SMCHD1-207ENST00000581711 KIF4AO95239 1232 aa9.78□□□□□ -0.84
SMCHD1-207ENST00000581711 TTC39BQ5VTQ0 682 aaPredicted RBP9.78□□□□□ -0.84
SMCHD1-207ENST00000581711 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.78□□□□□ -0.84
SMCHD1-207ENST00000581711 SH2B1Q9NRF2 756 aaPredicted RBP9.78□□□□□ -0.84
SMCHD1-207ENST00000581711 NOVA2Q9UNW9 492 aaKnown RBP9.78□□□□□ -0.84
SMCHD1-207ENST00000581711 OCLNQ16625 522 aa9.77□□□□□ -0.85
SMCHD1-207ENST00000581711 SWI5Q1ZZU3 235 aa9.77□□□□□ -0.85
SMCHD1-207ENST00000581711 BEND4Q6ZU67 534 aa9.77□□□□□ -0.85
SMCHD1-207ENST00000581711 KLHDC7BQ96G42 594 aa9.77□□□□□ -0.85
SMCHD1-207ENST00000581711 PBX4Q9BYU1 374 aa9.77□□□□□ -0.85
SMCHD1-207ENST00000581711 SEC31BQ9NQW1 1179 aa9.77□□□□□ -0.85
SMCHD1-207ENST00000581711 SART1O43290 800 aaKnown RBP9.76□□□□□ -0.85
SMCHD1-207ENST00000581711 BMP3P12645 472 aa9.76□□□□□ -0.85
SMCHD1-207ENST00000581711 RFX1P22670 979 aa9.76□□□□□ -0.85
SMCHD1-207ENST00000581711 CDCA8Q53HL2 280 aa9.76□□□□□ -0.85
SMCHD1-207ENST00000581711 KCNF1Q9H3M0 494 aa9.76□□□□□ -0.85
SMCHD1-207ENST00000581711 ADGRE2Q9UHX3 823 aa9.76□□□□□ -0.85
SMCHD1-207ENST00000581711 FNDC3AQ9Y2H6 1198 aaKnown RBP9.76□□□□□ -0.85
SMCHD1-207ENST00000581711 ACIN1Q9UKV3 1341 aaKnown RBP9.76□□□□□ -0.85
SMCHD1-207ENST00000581711 PTPRAP18433 802 aa9.75□□□□□ -0.85
SMCHD1-207ENST00000581711 ZAP70P43403 619 aa9.75□□□□□ -0.85
SMCHD1-207ENST00000581711 PREPP48147 710 aa9.75□□□□□ -0.85
SMCHD1-207ENST00000581711 ANKRD34AQ69YU3 496 aa9.75□□□□□ -0.85
SMCHD1-207ENST00000581711 COL26A1Q96A83 441 aa9.75□□□□□ -0.85
SMCHD1-207ENST00000581711 ABI2Q9NYB9 513 aaPredicted RBP9.75□□□□□ -0.85
SMCHD1-207ENST00000581711 FAM177BA6PVY3 158 aa9.74□□□□□ -0.85
SMCHD1-207ENST00000581711 CYP2E1P05181 493 aaPredicted RBP9.74□□□□□ -0.85
SMCHD1-207ENST00000581711 CEP120Q8N960 986 aa9.74□□□□□ -0.85
SMCHD1-207ENST00000581711 ADAM19Q9H013 955 aa9.74□□□□□ -0.85
SMCHD1-207ENST00000581711 FZD5Q13467 585 aa9.73□□□□□ -0.85
SMCHD1-207ENST00000581711 NCAPG2Q86XI2 1143 aa9.73□□□□□ -0.85
SMCHD1-207ENST00000581711 GPR152Q8TDT2 470 aa9.73□□□□□ -0.85
SMCHD1-207ENST00000581711 POP1Q99575 1024 aaKnown RBP9.73□□□□□ -0.85
SMCHD1-207ENST00000581711 H3BRJ5 948 aa9.72□□□□□ -0.85
SMCHD1-207ENST00000581711 PIP4K2BP78356 416 aa9.72□□□□□ -0.85
SMCHD1-207ENST00000581711 LCE1DQ5T752 114 aa9.72□□□□□ -0.85
SMCHD1-207ENST00000581711 CAPN12Q6ZSI9 719 aa9.72□□□□□ -0.85
SMCHD1-207ENST00000581711 MKNK1Q9BUB5 465 aa9.72□□□□□ -0.85
SMCHD1-207ENST00000581711 RNF208Q9H0X6 261 aa9.72□□□□□ -0.85
SMCHD1-207ENST00000581711 HIF3AQ9Y2N7 669 aa9.72□□□□□ -0.85
SMCHD1-207ENST00000581711 WDR64B1ANS9 1081 aa9.71□□□□□ -0.86
SMCHD1-207ENST00000581711 HOXA10P31260 410 aaPredicted RBP9.71□□□□□ -0.86
SMCHD1-207ENST00000581711 WNT8BQ93098 351 aa9.71□□□□□ -0.86
SMCHD1-207ENST00000581711 ZMYND15Q9H091 742 aa9.71□□□□□ -0.86
SMCHD1-207ENST00000581711 NLRP12P59046 1061 aa9.7□□□□□ -0.86
SMCHD1-207ENST00000581711 FAM69CQ0P6D2 419 aa9.7□□□□□ -0.86
SMCHD1-207ENST00000581711 NAA30Q147X3 362 aaPredicted RBP9.7□□□□□ -0.86
SMCHD1-207ENST00000581711 FDX2Q6P4F2 183 aa9.7□□□□□ -0.86
SMCHD1-207ENST00000581711 ABI1Q8IZP0 508 aa9.7□□□□□ -0.86
SMCHD1-207ENST00000581711 MFSD14AQ96MC6 490 aa9.7□□□□□ -0.86
SMCHD1-207ENST00000581711 RUSC1Q9BVN2 902 aa9.7□□□□□ -0.86
SMCHD1-207ENST00000581711 PIM2Q9P1W9 311 aa9.7□□□□□ -0.86
SMCHD1-207ENST00000581711 ZMIZ1Q9ULJ6 1067 aa9.7□□□□□ -0.86
SMCHD1-207ENST00000581711 CABP4P57796 275 aa9.69□□□□□ -0.86
SMCHD1-207ENST00000581711 KRTAP4-7Q9BYR0 210 aa9.69□□□□□ -0.86
SMCHD1-207ENST00000581711 OSGEPQ9NPF4 335 aa9.69□□□□□ -0.86
SMCHD1-207ENST00000581711 ZBTB39O15060 712 aa9.68□□□□□ -0.86
SMCHD1-207ENST00000581711 CXXC1Q9P0U4 656 aaPredicted RBP9.68□□□□□ -0.86
SMCHD1-207ENST00000581711 KANSL3Q9P2N6 904 aa9.68□□□□□ -0.86
SMCHD1-207ENST00000581711 GAS2O43903 313 aaKnown RBP9.67□□□□□ -0.86
SMCHD1-207ENST00000581711 PDE12Q6L8Q7 609 aaKnown RBP9.67□□□□□ -0.86
SMCHD1-207ENST00000581711 ELP3Q9H9T3 547 aa9.67□□□□□ -0.86
SMCHD1-207ENST00000581711 TMEM63CQ9P1W3 806 aa9.67□□□□□ -0.86
SMCHD1-207ENST00000581711 STIM2Q9P246 746 aa9.67□□□□□ -0.86
SMCHD1-207ENST00000581711 MAP4P27816 1152 aaKnown RBP9.66□□□□□ -0.86
SMCHD1-207ENST00000581711 ELOAQ14241 798 aaKnown RBP9.66□□□□□ -0.86
SMCHD1-207ENST00000581711 STK32AQ8WU08 396 aa9.66□□□□□ -0.86
SMCHD1-207ENST00000581711 SLC7A3Q8WY07 619 aa9.66□□□□□ -0.86
SMCHD1-207ENST00000581711 ANGEL1Q9UNK9 670 aaKnown RBP9.66□□□□□ -0.86
SMCHD1-207ENST00000581711 ACPPP15309 386 aa9.65□□□□□ -0.86
SMCHD1-207ENST00000581711 SGO2Q562F6 1265 aa9.65□□□□□ -0.86
SMCHD1-207ENST00000581711 ABTB2Q8N961 1025 aa9.65□□□□□ -0.86
SMCHD1-207ENST00000581711 GIMAP7Q8NHV1 300 aa9.65□□□□□ -0.86
SMCHD1-207ENST00000581711 ATG3Q9NT62 314 aa9.65□□□□□ -0.86
SMCHD1-207ENST00000581711 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.65□□□□□ -0.86
SMCHD1-207ENST00000581711 MEGF11A6BM72 1044 aa9.64□□□□□ -0.87
SMCHD1-207ENST00000581711 NFKBIEO00221 500 aa9.64□□□□□ -0.87
SMCHD1-207ENST00000581711 MSMPQ1L6U9 139 aa9.64□□□□□ -0.87
SMCHD1-207ENST00000581711 ZNF438Q7Z4V0 828 aa9.64□□□□□ -0.87
SMCHD1-207ENST00000581711 FBXL6Q8N531 539 aa9.64□□□□□ -0.87
SMCHD1-207ENST00000581711 CNTN3Q9P232 1028 aa9.64□□□□□ -0.87
SMCHD1-207ENST00000581711 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
SMCHD1-207ENST00000581711 LEMD3Q9Y2U8 911 aa9.64□□□□□ -0.87
SMCHD1-207ENST00000581711 F13BP05160 661 aa9.63□□□□□ -0.87
SMCHD1-207ENST00000581711 NUDT16Q96DE0 195 aaKnown RBP9.63□□□□□ -0.87
SMCHD1-207ENST00000581711 PDE2AO00408 941 aaPredicted RBP9.62□□□□□ -0.87
SMCHD1-207ENST00000581711 FOSL1P15407 271 aa9.62□□□□□ -0.87
SMCHD1-207ENST00000581711 HGSNATQ68CP4 663 aa9.62□□□□□ -0.87
SMCHD1-207ENST00000581711 DZANK1Q9NVP4 752 aa9.62□□□□□ -0.87
SMCHD1-207ENST00000581711 CCDC39Q9UFE4 941 aa9.62□□□□□ -0.87
SMCHD1-207ENST00000581711 SOX13Q9UN79 622 aa9.62□□□□□ -0.87
SMCHD1-207ENST00000581711 RXRBP28702 533 aa9.61□□□□□ -0.87
SMCHD1-207ENST00000581711 ARL4DP49703 201 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms