RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 HAUS7Q99871 368 aa15.31■□□□□ 0.04
CDK5RAP3-217ENST00000580287 ANO2Q9NQ90 1003 aa15.31■□□□□ 0.04
CDK5RAP3-217ENST00000580287 BSDC1Q9NW68 430 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-217ENST00000580287 RTL9Q8NET4 1388 aa15.31■□□□□ 0.04
CDK5RAP3-217ENST00000580287 FGFR2P21802 821 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 KLRK1P26718 216 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 BCAMP50895 628 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 ST5P78524 1137 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 CCDC158Q5M9N0 1113 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 ZAP70P43403 619 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 CCDC102BQ68D86 513 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 K7ELQ4 463 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 MCAMP43121 646 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 LPIN2Q92539 896 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 SEC62Q99442 399 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 DIAPH3Q9NSV4 1193 aa15.3■□□□□ 0.04
CDK5RAP3-217ENST00000580287 NMIQ13287 307 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-217ENST00000580287 FLAD1Q8NFF5 587 aa15.29■□□□□ 0.04
CDK5RAP3-217ENST00000580287 PAG1Q9NWQ8 432 aa15.29■□□□□ 0.04
CDK5RAP3-217ENST00000580287 TNRC6CQ9HCJ0 1690 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-217ENST00000580287 A0A0D9SFI3 127 aa15.29■□□□□ 0.04
CDK5RAP3-217ENST00000580287 GYG1P46976 350 aa15.29■□□□□ 0.04
CDK5RAP3-217ENST00000580287 RPGRQ92834 1020 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-217ENST00000580287 COL24A1Q17RW2 1714 aa15.28■□□□□ 0.04
CDK5RAP3-217ENST00000580287 RABEP1Q15276 862 aa15.28■□□□□ 0.04
CDK5RAP3-217ENST00000580287 GPR101Q96P66 508 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-217ENST00000580287 OLFM4Q6UX06 510 aa15.28■□□□□ 0.04
CDK5RAP3-217ENST00000580287 TNPO1Q92973 898 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-217ENST00000580287 PANK2Q9BZ23 570 aa15.28■□□□□ 0.04
CDK5RAP3-217ENST00000580287 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
CDK5RAP3-217ENST00000580287 SGSM2O43147 1006 aa15.27■□□□□ 0.04
CDK5RAP3-217ENST00000580287 TRAK2O60296 914 aa15.27■□□□□ 0.04
CDK5RAP3-217ENST00000580287 SLC5A1P13866 664 aa15.27■□□□□ 0.03
CDK5RAP3-217ENST00000580287 CRY2Q49AN0 593 aa15.27■□□□□ 0.03
CDK5RAP3-217ENST00000580287 CCDC129Q6ZRS4 1044 aa15.27■□□□□ 0.03
CDK5RAP3-217ENST00000580287 TXNRD3Q86VQ6 643 aa15.27■□□□□ 0.03
CDK5RAP3-217ENST00000580287 TUBGCP6Q96RT7 1819 aa15.26■□□□□ 0.03
CDK5RAP3-217ENST00000580287 GRAPQ13588 217 aa15.26■□□□□ 0.03
CDK5RAP3-217ENST00000580287 ZNF589Q86UQ0 364 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-217ENST00000580287 GRAPLQ8TC17 118 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-217ENST00000580287 HMGB2P26583 209 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-217ENST00000580287 PTH1RQ03431 593 aa15.26■□□□□ 0.03
CDK5RAP3-217ENST00000580287 PALD1Q9ULE6 856 aa15.26■□□□□ 0.03
CDK5RAP3-217ENST00000580287 CYP2E1P05181 493 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-217ENST00000580287 DDIT3P35638 169 aa15.25■□□□□ 0.03
CDK5RAP3-217ENST00000580287 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
CDK5RAP3-217ENST00000580287 KBTBD3Q8NAB2 608 aa15.25■□□□□ 0.03
CDK5RAP3-217ENST00000580287 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
CDK5RAP3-217ENST00000580287 LRP5O75197 1615 aa15.25■□□□□ 0.03
CDK5RAP3-217ENST00000580287 HMG20BQ9P0W2 317 aa15.25■□□□□ 0.03
CDK5RAP3-217ENST00000580287 ANKIB1Q9P2G1 1089 aa15.25■□□□□ 0.03
CDK5RAP3-217ENST00000580287 KCNJ4P48050 445 aa15.24■□□□□ 0.03
CDK5RAP3-217ENST00000580287 NSFL1CQ9UNZ2 370 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-217ENST00000580287 JAG2Q9Y219 1238 aa15.24■□□□□ 0.03
CDK5RAP3-217ENST00000580287 LAMB2P55268 1798 aa15.24■□□□□ 0.03
CDK5RAP3-217ENST00000580287 BRIP1Q9BX63 1249 aa15.24■□□□□ 0.03
CDK5RAP3-217ENST00000580287 ST18O60284 1047 aa15.23■□□□□ 0.03
CDK5RAP3-217ENST00000580287 LSG1Q9H089 658 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-217ENST00000580287 PIH1D3Q9NQM4 214 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-217ENST00000580287 AK9Q5TCS8 1911 aa15.23■□□□□ 0.03
CDK5RAP3-217ENST00000580287 ZBTB7AO95365 584 aa15.23■□□□□ 0.03
CDK5RAP3-217ENST00000580287 XRCC6P12956 609 aaKnown RBP eCLIP15.23■□□□□ 0.03
CDK5RAP3-217ENST00000580287 CHRNA5P30532 468 aa15.23■□□□□ 0.03
CDK5RAP3-217ENST00000580287 FAM84BQ96KN1 310 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-217ENST00000580287 RRAGDQ9NQL2 400 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-217ENST00000580287 SRGNP10124 158 aa15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 PKP1Q13835 747 aa15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 CHAMP1Q96JM3 812 aa15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 KLRG2A4D1S0 409 aaPredicted RBP15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 IDH1O75874 414 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 GPSM2P81274 684 aa15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 UBE4AQ14139 1066 aa15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 SPATA5Q8NB90 893 aa15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 ZNF622Q969S3 477 aaKnown RBP eCLIP15.22■□□□□ 0.031e-10■■□□□ 12.5
CDK5RAP3-217ENST00000580287 WWC3Q9ULE0 1092 aa15.22■□□□□ 0.03
CDK5RAP3-217ENST00000580287 ZNF804BA4D1E1 1349 aa15.21■□□□□ 0.03
CDK5RAP3-217ENST00000580287 MCCP23508 829 aa15.21■□□□□ 0.03
CDK5RAP3-217ENST00000580287 ARID4AP29374 1257 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-217ENST00000580287 VPS37DQ86XT2 251 aa15.21■□□□□ 0.03
CDK5RAP3-217ENST00000580287 L1TD1Q5T7N2 865 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-217ENST00000580287 KIAA1211Q6ZU35 1233 aa15.21■□□□□ 0.03
CDK5RAP3-217ENST00000580287 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.21■□□□□ 0.03
CDK5RAP3-217ENST00000580287 HOXA10P31260 410 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-217ENST00000580287 NEK4P51957 841 aa15.2■□□□□ 0.02
CDK5RAP3-217ENST00000580287 VPS53Q5VIR6 699 aa15.2■□□□□ 0.02
CDK5RAP3-217ENST00000580287 RUFY2Q8WXA3 655 aa15.2■□□□□ 0.02
CDK5RAP3-217ENST00000580287 OSBP2Q969R2 916 aa15.2■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-217ENST00000580287 CASZ1Q86V15 1759 aa15.2■□□□□ 0.02
CDK5RAP3-217ENST00000580287 NOL8Q76FK4 1167 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-217ENST00000580287 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
CDK5RAP3-217ENST00000580287 WASHC4Q2M389 1173 aa15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 ANKRD2Q9GZV1 360 aa15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 TAF6LQ9Y6J9 622 aa15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 M0R2C6 588 aa15.19■□□□□ 0.02
CDK5RAP3-217ENST00000580287 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms