RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 DDX17Q92841 729 aaKnown RBP10.06□□□□□ -0.8
PPP4R1-216ENST00000580283 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.06□□□□□ -0.8
PPP4R1-216ENST00000580283 ABCC5O15440 1437 aa10.06□□□□□ -0.8
PPP4R1-216ENST00000580283 PTPRUQ92729 1446 aa10.06□□□□□ -0.8
PPP4R1-216ENST00000580283 PRMT3O60678 531 aa10.05□□□□□ -0.8
PPP4R1-216ENST00000580283 TNP2Q05952 138 aa10.05□□□□□ -0.8
PPP4R1-216ENST00000580283 C7orf43Q8WVR3 580 aa10.05□□□□□ -0.8
PPP4R1-216ENST00000580283 PRIMPOLQ96LW4 560 aa10.05□□□□□ -0.8
PPP4R1-216ENST00000580283 C8orf37Q96NL8 207 aa10.05□□□□□ -0.8
PPP4R1-216ENST00000580283 SLC52A1Q9NWF4 448 aa10.05□□□□□ -0.8
PPP4R1-216ENST00000580283 MYOM3Q5VTT5 1437 aa10.05□□□□□ -0.8
PPP4R1-216ENST00000580283 RIMS2Q9UQ26 1411 aa10.05□□□□□ -0.8
PPP4R1-216ENST00000580283 ASXL1Q8IXJ9 1541 aa10.04□□□□□ -0.8
PPP4R1-216ENST00000580283 ATF3P18847 181 aa10.04□□□□□ -0.8
PPP4R1-216ENST00000580283 RTN1Q16799 776 aa10.04□□□□□ -0.8
PPP4R1-216ENST00000580283 ZNF385CQ66K41 422 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-216ENST00000580283 WHAMMQ8TF30 809 aa10.04□□□□□ -0.8
PPP4R1-216ENST00000580283 HSH2DQ96JZ2 352 aa10.04□□□□□ -0.8
PPP4R1-216ENST00000580283 PNPLA6Q8IY17 1366 aa10.03□□□□□ -0.8
PPP4R1-216ENST00000580283 CTBSQ01459 385 aa10.03□□□□□ -0.8
PPP4R1-216ENST00000580283 SUSD3Q96L08 255 aa10.03□□□□□ -0.8
PPP4R1-216ENST00000580283 ARID3AQ99856 593 aa10.03□□□□□ -0.8
PPP4R1-216ENST00000580283 MST1RQ04912 1400 aa10.02□□□□□ -0.81
PPP4R1-216ENST00000580283 CD33P20138 364 aa10.02□□□□□ -0.81
PPP4R1-216ENST00000580283 LAMC2Q13753 1193 aa10.02□□□□□ -0.81
PPP4R1-216ENST00000580283 LYPD4Q6UWN0 246 aa10.02□□□□□ -0.81
PPP4R1-216ENST00000580283 KLRG1Q96E93 195 aa10.02□□□□□ -0.81
PPP4R1-216ENST00000580283 CEP63Q96MT8 703 aa10.02□□□□□ -0.81
PPP4R1-216ENST00000580283 OXCT2Q9BYC2 517 aaPredicted RBP10.02□□□□□ -0.81
PPP4R1-216ENST00000580283 MARK1Q9P0L2 795 aa10.02□□□□□ -0.81
PPP4R1-216ENST00000580283 KANK1Q14678 1352 aa10.01□□□□□ -0.81
PPP4R1-216ENST00000580283 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
PPP4R1-216ENST00000580283 ZNF280CQ8ND82 737 aa10.01□□□□□ -0.81
PPP4R1-216ENST00000580283 LRRC59Q96AG4 307 aaKnown RBP10.01□□□□□ -0.81
PPP4R1-216ENST00000580283 ENAMQ9NRM1 1142 aa10.01□□□□□ -0.81
PPP4R1-216ENST00000580283 AMOTL2Q9Y2J4 779 aa10.01□□□□□ -0.81
PPP4R1-216ENST00000580283 XRN1Q8IZH2 1706 aaKnown RBP10□□□□□ -0.81
PPP4R1-216ENST00000580283 BCRP11274 1271 aa10□□□□□ -0.81
PPP4R1-216ENST00000580283 FKBP5Q13451 457 aaPredicted RBP10□□□□□ -0.81
PPP4R1-216ENST00000580283 FAM182BQ5T319 152 aa10□□□□□ -0.81
PPP4R1-216ENST00000580283 CLP1Q92989 425 aaKnown RBP10□□□□□ -0.81
PPP4R1-216ENST00000580283 ACDQ96AP0 544 aa10□□□□□ -0.81
PPP4R1-216ENST00000580283 GDF2Q9UK05 429 aaPredicted RBP10□□□□□ -0.81
PPP4R1-216ENST00000580283 PRR12Q9ULL5 1215 aa10□□□□□ -0.81
PPP4R1-216ENST00000580283 BRWD3Q6RI45 1802 aa10□□□□□ -0.81
PPP4R1-216ENST00000580283 NRXN3Q9Y4C0 1643 aa10□□□□□ -0.81
PPP4R1-216ENST00000580283 C2CD2LO14523 706 aa9.99□□□□□ -0.81
PPP4R1-216ENST00000580283 EFSO43281 561 aa9.99□□□□□ -0.81
PPP4R1-216ENST00000580283 BRD7Q9NPI1 651 aa9.99□□□□□ -0.81
PPP4R1-216ENST00000580283 UNC13BO14795 1591 aa9.99□□□□□ -0.81
PPP4R1-216ENST00000580283 LAMC1P11047 1609 aa9.99□□□□□ -0.81
PPP4R1-216ENST00000580283 PTPN23Q9H3S7 1636 aa9.99□□□□□ -0.81
PPP4R1-216ENST00000580283 PIK3R4Q99570 1358 aa9.99□□□□□ -0.81
PPP4R1-216ENST00000580283 DCCP43146 1447 aa9.99□□□□□ -0.81
PPP4R1-216ENST00000580283 DAPK1P53355 1430 aa9.99□□□□□ -0.81
PPP4R1-216ENST00000580283 TRPM2O94759 1503 aa9.98□□□□□ -0.81
PPP4R1-216ENST00000580283 OCLNQ16625 522 aa9.98□□□□□ -0.81
PPP4R1-216ENST00000580283 GOLGA6L1Q8N7Z2 621 aa9.98□□□□□ -0.81
PPP4R1-216ENST00000580283 STRN4Q9NRL3 753 aa9.98□□□□□ -0.81
PPP4R1-216ENST00000580283 CXXC1Q9P0U4 656 aaPredicted RBP9.98□□□□□ -0.81
PPP4R1-216ENST00000580283 NALCNQ8IZF0 1738 aa9.98□□□□□ -0.81
PPP4R1-216ENST00000580283 ATRNO75882 1429 aa9.98□□□□□ -0.81
PPP4R1-216ENST00000580283 MARF1Q9Y4F3 1742 aaKnown RBP9.97□□□□□ -0.81
PPP4R1-216ENST00000580283 DGKZQ13574 1117 aa9.97□□□□□ -0.81
PPP4R1-216ENST00000580283 BTLAQ7Z6A9 289 aa9.97□□□□□ -0.81
PPP4R1-216ENST00000580283 NEDD1Q8NHV4 660 aa9.97□□□□□ -0.81
PPP4R1-216ENST00000580283 USP21Q9UK80 565 aa9.97□□□□□ -0.81
PPP4R1-216ENST00000580283 RPRD2Q5VT52 1461 aaKnown RBP9.97□□□□□ -0.81
PPP4R1-216ENST00000580283 LRP5O75197 1615 aa9.96□□□□□ -0.81
PPP4R1-216ENST00000580283 E9PCH4 1651 aa9.96□□□□□ -0.81
PPP4R1-216ENST00000580283 TGFBR3LH3BV60 316 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 ARHGEF15O94989 841 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 ARAFP10398 606 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 TYRO3Q06418 890 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 SFSWAPQ12872 951 aaKnown RBP9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 C11orf91Q3C1V1 193 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 IER5Q5VY09 327 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 MYO19Q96H55 970 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 MKNK1Q9BUB5 465 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 KLK14Q9P0G3 267 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 ADAMTS8Q9UP79 889 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 BCL9LQ86UU0 1499 aa9.96□□□□□ -0.82
PPP4R1-216ENST00000580283 OIP5O43482 229 aa9.95□□□□□ -0.82
PPP4R1-216ENST00000580283 ATP2B4P23634 1241 aa9.95□□□□□ -0.82
PPP4R1-216ENST00000580283 MARSP56192 900 aaKnown RBP9.95□□□□□ -0.82
PPP4R1-216ENST00000580283 LRRC4BQ9NT99 713 aa9.95□□□□□ -0.82
PPP4R1-216ENST00000580283 GGA1Q9UJY5 639 aa9.95□□□□□ -0.82
PPP4R1-216ENST00000580283 TRPC5Q9UL62 973 aaPredicted RBP9.95□□□□□ -0.82
PPP4R1-216ENST00000580283 KCNH4Q9UQ05 1017 aa9.95□□□□□ -0.82
PPP4R1-216ENST00000580283 DNMT3AQ9Y6K1 912 aaPredicted RBP9.95□□□□□ -0.82
PPP4R1-216ENST00000580283 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-216ENST00000580283 NEURL1BA8MQ27 555 aa9.94□□□□□ -0.82
PPP4R1-216ENST00000580283 PTCD1O75127 700 aaKnown RBP9.94□□□□□ -0.82
PPP4R1-216ENST00000580283 ADH6P28332 368 aa9.94□□□□□ -0.82
PPP4R1-216ENST00000580283 NEUROD1Q13562 356 aa9.94□□□□□ -0.82
PPP4R1-216ENST00000580283 DEFB132Q7Z7B7 95 aa9.94□□□□□ -0.82
PPP4R1-216ENST00000580283 GALNT6Q8NCL4 622 aa9.94□□□□□ -0.82
PPP4R1-216ENST00000580283 AVENQ9NQS1 362 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-216ENST00000580283 HCN2Q9UL51 889 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms