RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 HEATR3Q7Z4Q2 680 aa17.39■□□□□ 0.38
ITGB4-206ENST00000579662 CPLX3Q8WVH0 158 aa17.39■□□□□ 0.38
ITGB4-206ENST00000579662 DHX32Q7L7V1 743 aaKnown RBP17.39■□□□□ 0.37
ITGB4-206ENST00000579662 TAX1BP1Q86VP1 789 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 SYCP3Q8IZU3 236 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 MAGEB6Q8N7X4 407 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.39■□□□□ 0.37
ITGB4-206ENST00000579662 PANK2Q9BZ23 570 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 DENND2AQ9ULE3 1009 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 CNPY2Q9Y2B0 182 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 PTPRTO14522 1441 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 RUFY3Q7L099 469 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 TRIM47Q96LD4 638 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 ZC3H12CQ9C0D7 883 aaKnown RBP17.39■□□□□ 0.37
ITGB4-206ENST00000579662 TNNT1P13805 278 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 LUZP1Q86V48 1076 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 EHBP1Q8NDI1 1231 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 SAMM50Q9Y512 469 aa17.39■□□□□ 0.37
ITGB4-206ENST00000579662 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.39■□□□□ 0.37
ITGB4-206ENST00000579662 ANKRD62A6NC57 917 aa17.38■□□□□ 0.37
ITGB4-206ENST00000579662 CCDC172P0C7W6 258 aa17.38■□□□□ 0.37
ITGB4-206ENST00000579662 NAPAP54920 295 aa17.38■□□□□ 0.37
ITGB4-206ENST00000579662 TCERG1LQ5VWI1 586 aa17.38■□□□□ 0.37
ITGB4-206ENST00000579662 RBM17Q96I25 401 aaKnown RBP17.38■□□□□ 0.37
ITGB4-206ENST00000579662 EZRP15311 586 aaKnown RBP17.38■□□□□ 0.37
ITGB4-206ENST00000579662 USP48Q86UV5 1035 aa17.38■□□□□ 0.37
ITGB4-206ENST00000579662 KDM5AP29375 1690 aaKnown RBP17.38■□□□□ 0.37
ITGB4-206ENST00000579662 PLEKHG3A1L390 1219 aa17.38■□□□□ 0.37
ITGB4-206ENST00000579662 MYO5CQ9NQX4 1742 aa17.38■□□□□ 0.37
ITGB4-206ENST00000579662 EYA2O00167 538 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 HSPA2P54652 639 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
ITGB4-206ENST00000579662 TCEANC2Q96MN5 208 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 SLC52A2Q9HAB3 445 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 RBM28Q9NW13 759 aaKnown RBP17.37■□□□□ 0.37
ITGB4-206ENST00000579662 TRIM75PA6NK02 468 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 LDHBP07195 334 aaKnown RBP17.37■□□□□ 0.37
ITGB4-206ENST00000579662 BRAPQ7Z569 592 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 NAA15Q9BXJ9 866 aaKnown RBP17.37■□□□□ 0.37
ITGB4-206ENST00000579662 AK2P54819 239 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 RRAGBQ5VZM2 374 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 USP37Q86T82 979 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 PICALMQ13492 652 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 KIF24Q5T7B8 1368 aa17.37■□□□□ 0.37
ITGB4-206ENST00000579662 BLMP54132 1417 aaPredicted RBP17.36■□□□□ 0.37
ITGB4-206ENST00000579662 KRT2P35908 639 aa17.36■□□□□ 0.37
ITGB4-206ENST00000579662 FAM200AQ8TCP9 573 aa17.36■□□□□ 0.37
ITGB4-206ENST00000579662 N4BP3O15049 544 aa17.36■□□□□ 0.37
ITGB4-206ENST00000579662 IFI16Q16666 785 aaKnown RBP17.36■□□□□ 0.37
ITGB4-206ENST00000579662 TRAPPC3LQ5T215 181 aa17.36■□□□□ 0.37
ITGB4-206ENST00000579662 ATL3Q6DD88 541 aa17.36■□□□□ 0.37
ITGB4-206ENST00000579662 MCM9Q9NXL9 1143 aa17.36■□□□□ 0.37
ITGB4-206ENST00000579662 F8W031 263 aaPredicted RBP17.36■□□□□ 0.37
ITGB4-206ENST00000579662 TFCP2L1Q9NZI6 479 aa17.36■□□□□ 0.37
ITGB4-206ENST00000579662 CGNQ9P2M7 1197 aaKnown RBP17.36■□□□□ 0.37
ITGB4-206ENST00000579662 GIMAP6Q6P9H5 292 aa17.35■□□□□ 0.37
ITGB4-206ENST00000579662 SPTLC2O15270 562 aa17.35■□□□□ 0.37
ITGB4-206ENST00000579662 PPFIA3O75145 1194 aa17.35■□□□□ 0.37
ITGB4-206ENST00000579662 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
ITGB4-206ENST00000579662 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
ITGB4-206ENST00000579662 USP26Q9BXU7 913 aa17.35■□□□□ 0.37
ITGB4-206ENST00000579662 TRIM35Q9UPQ4 493 aa17.35■□□□□ 0.37
ITGB4-206ENST00000579662 SH3TC1Q8TE82 1336 aa17.35■□□□□ 0.37
ITGB4-206ENST00000579662 PUM3Q15397 648 aaKnown RBP17.34■□□□□ 0.37
ITGB4-206ENST00000579662 CCDC174Q6PII3 467 aa17.34■□□□□ 0.37
ITGB4-206ENST00000579662 SNW1Q13573 536 aaKnown RBP17.34■□□□□ 0.37
ITGB4-206ENST00000579662 TNNI3KQ59H18 835 aa17.34■□□□□ 0.37
ITGB4-206ENST00000579662 G2E3Q7L622 706 aa17.34■□□□□ 0.37
ITGB4-206ENST00000579662 NSFL1CQ9UNZ2 370 aaKnown RBP17.34■□□□□ 0.37
ITGB4-206ENST00000579662 FPGT-TNNI3KV9GXZ4 949 aa17.34■□□□□ 0.37
ITGB4-206ENST00000579662 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
ITGB4-206ENST00000579662 PDE8AO60658 829 aa17.34■□□□□ 0.37
ITGB4-206ENST00000579662 HCLS1P14317 486 aaPredicted RBP17.34■□□□□ 0.37
ITGB4-206ENST00000579662 CHMP4BP1P59074 171 aa17.34■□□□□ 0.37
ITGB4-206ENST00000579662 NAP1L4Q99733 375 aaKnown RBP17.34■□□□□ 0.37
ITGB4-206ENST00000579662 TAOK3Q9H2K8 898 aa17.34■□□□□ 0.37
ITGB4-206ENST00000579662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.34■□□□□ 0.37
ITGB4-206ENST00000579662 PSMA7O14818 248 aa17.34■□□□□ 0.37
ITGB4-206ENST00000579662 PTPDC1A2A3K4 754 aa17.33■□□□□ 0.37
ITGB4-206ENST00000579662 GNPATO15228 680 aa17.33■□□□□ 0.37
ITGB4-206ENST00000579662 LIG1P18858 919 aa17.33■□□□□ 0.37
ITGB4-206ENST00000579662 GNA11P29992 359 aa17.33■□□□□ 0.37
ITGB4-206ENST00000579662 UBASH3AP57075 661 aa17.33■□□□□ 0.37
ITGB4-206ENST00000579662 CERS3Q8IU89 383 aa17.33■□□□□ 0.37
ITGB4-206ENST00000579662 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 ANO6Q4KMQ2 910 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 HELBQ8NG08 1087 aaPredicted RBP17.33■□□□□ 0.36
ITGB4-206ENST00000579662 FERMT2Q96AC1 680 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 APOBRQ0VD83 1088 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 TRMT1Q9NXH9 659 aaKnown RBP17.33■□□□□ 0.36
ITGB4-206ENST00000579662 B4DLN1 442 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 ITGA6P23229 1130 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 POLD1P28340 1107 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 MRPL12P52815 198 aaKnown RBP17.33■□□□□ 0.36
ITGB4-206ENST00000579662 DNM1Q05193 864 aaKnown RBP17.33■□□□□ 0.36
ITGB4-206ENST00000579662 TTC6Q86TZ1 520 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 ORAI2Q96SN7 254 aa17.33■□□□□ 0.36
ITGB4-206ENST00000579662 AFMP43652 599 aa17.32■□□□□ 0.36
ITGB4-206ENST00000579662 CNBD1Q8NA66 436 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms