RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 IRX6P78412 446 aaPredicted RBP7.41□□□□□ -1.22
DDX42-210ENST00000579539 PTPN12Q05209 780 aaKnown RBP7.41□□□□□ -1.22
DDX42-210ENST00000579539 FAM182BQ5T319 152 aa7.41□□□□□ -1.22
DDX42-210ENST00000579539 EGFLAMQ63HQ2 1017 aa7.41□□□□□ -1.22
DDX42-210ENST00000579539 LRRC69Q6ZNQ3 347 aa7.41□□□□□ -1.22
DDX42-210ENST00000579539 USP48Q86UV5 1035 aa7.41□□□□□ -1.22
DDX42-210ENST00000579539 BEND7Q8N7W2 519 aaPredicted RBP7.41□□□□□ -1.22
DDX42-210ENST00000579539 ZSWIM4Q9H7M6 989 aa7.41□□□□□ -1.22
DDX42-210ENST00000579539 STRN4Q9NRL3 753 aa7.41□□□□□ -1.22
DDX42-210ENST00000579539 KLF15Q9UIH9 416 aa7.41□□□□□ -1.22
DDX42-210ENST00000579539 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.41□□□□□ -1.22
DDX42-210ENST00000579539 GJA3Q9Y6H8 435 aa7.41□□□□□ -1.22
DDX42-210ENST00000579539 FHAD1B1AJZ9 1412 aa7.41□□□□□ -1.22
DDX42-210ENST00000579539 EIF1AYO14602 144 aaKnown RBP7.4□□□□□ -1.22
DDX42-210ENST00000579539 ARAFP10398 606 aa7.4□□□□□ -1.22
DDX42-210ENST00000579539 HIRAP54198 1017 aaPredicted RBP7.4□□□□□ -1.22
DDX42-210ENST00000579539 SNRPNP63162 240 aaKnown RBP7.4□□□□□ -1.22
DDX42-210ENST00000579539 DGKZQ13574 1117 aa7.4□□□□□ -1.22
DDX42-210ENST00000579539 SLCO4C1Q6ZQN7 724 aa7.4□□□□□ -1.22
DDX42-210ENST00000579539 CWC22Q9HCG8 908 aaKnown RBP7.4□□□□□ -1.22
DDX42-210ENST00000579539 HCN4Q9Y3Q4 1203 aa7.4□□□□□ -1.22
DDX42-210ENST00000579539 RAB3GAP2Q9H2M9 1393 aa7.4□□□□□ -1.22
DDX42-210ENST00000579539 SBNO2Q9Y2G9 1366 aa7.4□□□□□ -1.22
DDX42-210ENST00000579539 EIF4G1Q04637 1599 aaKnown RBP7.39□□□□□ -1.23
DDX42-210ENST00000579539 MAP3K1Q13233 1512 aa7.39□□□□□ -1.23
DDX42-210ENST00000579539 HOXB4P17483 251 aaPredicted RBP7.39□□□□□ -1.23
DDX42-210ENST00000579539 RBM10P98175 930 aaKnown RBP7.39□□□□□ -1.23
DDX42-210ENST00000579539 C1orf53Q5VUE5 145 aa7.39□□□□□ -1.23
DDX42-210ENST00000579539 JAZF1Q86VZ6 243 aa7.39□□□□□ -1.23
DDX42-210ENST00000579539 ALDH16A1Q8IZ83 802 aa7.39□□□□□ -1.23
DDX42-210ENST00000579539 FRMD6Q96NE9 622 aa7.39□□□□□ -1.23
DDX42-210ENST00000579539 NAP1L5Q96NT1 182 aaPredicted RBP7.39□□□□□ -1.23
DDX42-210ENST00000579539 OSBPL2Q9H1P3 480 aa7.39□□□□□ -1.23
DDX42-210ENST00000579539 KLK14Q9P0G3 267 aa7.39□□□□□ -1.23
DDX42-210ENST00000579539 GPC6Q9Y625 555 aaPredicted RBP7.39□□□□□ -1.23
DDX42-210ENST00000579539 A6NHS1 94 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 NEURL1BA8MQ27 555 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 PHF20L1A8MW92 1017 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 EPXP11678 715 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 EIF4BP23588 611 aaKnown RBP7.38□□□□□ -1.23
DDX42-210ENST00000579539 TNNT2P45379 298 aaPredicted RBP7.38□□□□□ -1.23
DDX42-210ENST00000579539 GJA8P48165 433 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 LAMC2Q13753 1193 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 RTN1Q16799 776 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 C11orf91Q3C1V1 193 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 HS2ST1Q7LGA3 356 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 GPATCH3Q96I76 525 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 PHACTR1Q9C0D0 580 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 MARK1Q9P0L2 795 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 SPG7Q9UQ90 795 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 CHMP3Q9Y3E7 222 aa7.38□□□□□ -1.23
DDX42-210ENST00000579539 LAS1LQ9Y4W2 734 aaKnown RBP7.38□□□□□ -1.23
DDX42-210ENST00000579539 TONSLQ96HA7 1378 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 BECN1Q14457 450 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 TAF7LQ5H9L4 462 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 MEI1Q5TIA1 1274 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 ZNF746Q6NUN9 644 aaPredicted RBP7.37□□□□□ -1.23
DDX42-210ENST00000579539 PI16Q6UXB8 463 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 PODNQ7Z5L7 613 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 RHPN1Q8TCX5 695 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 NUDT16Q96DE0 195 aaKnown RBP7.37□□□□□ -1.23
DDX42-210ENST00000579539 BTBD6Q96KE9 485 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 GGNBP2Q9H3C7 697 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 PRKRIP1Q9H875 184 aaPredicted RBP7.37□□□□□ -1.23
DDX42-210ENST00000579539 NEUROD4Q9HD90 331 aa7.37□□□□□ -1.23
DDX42-210ENST00000579539 PTMSP20962 102 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 MRE11P49959 708 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 SFSWAPQ12872 951 aaKnown RBP7.36□□□□□ -1.23
DDX42-210ENST00000579539 BMS1Q14692 1282 aaKnown RBP7.36□□□□□ -1.23
DDX42-210ENST00000579539 GRIN2CQ14957 1233 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 TCEAL1Q15170 157 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.36□□□□□ -1.23
DDX42-210ENST00000579539 TAF3Q5VWG9 929 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 FCHSD1Q86WN1 690 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 SMAP1Q8IYB5 467 aaPredicted RBP7.36□□□□□ -1.23
DDX42-210ENST00000579539 GPR152Q8TDT2 470 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 IFT43Q96FT9 208 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 OSBPL7Q9BZF2 842 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 DNAJC25Q9H1X3 360 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 C12orf49Q9H741 205 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 AVENQ9NQS1 362 aaPredicted RBP7.36□□□□□ -1.23
DDX42-210ENST00000579539 GGT7Q9UJ14 662 aa7.36□□□□□ -1.23
DDX42-210ENST00000579539 BAZ1AQ9NRL2 1556 aaPredicted RBP7.36□□□□□ -1.23
DDX42-210ENST00000579539 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 WDR97A6NE52 1622 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 GOLGA6L3A6NEY3 463 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 STK10O94804 968 aaKnown RBP7.35□□□□□ -1.23
DDX42-210ENST00000579539 ADH6P28332 368 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 PCBP4P57723 403 aaKnown RBP7.35□□□□□ -1.23
DDX42-210ENST00000579539 PAK2Q13177 524 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 UTP14CQ5TAP6 766 aaKnown RBP7.35□□□□□ -1.23
DDX42-210ENST00000579539 SOGA3Q5TF21 947 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 ZNF468Q5VIY5 522 aaPredicted RBP7.35□□□□□ -1.23
DDX42-210ENST00000579539 LINC00114Q6XXX2 140 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 ZNF280CQ8ND82 737 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 DCAF5Q96JK2 942 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 HSH2DQ96JZ2 352 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 SPACA7Q96KW9 195 aa7.35□□□□□ -1.23
DDX42-210ENST00000579539 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.35□□□□□ -1.23
DDX42-210ENST00000579539 RRAGCQ9HB90 399 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms