RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ITPRIPQ8IWB1 547 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 ANKRD44Q8N8A2 993 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 KLHDC4Q8TBB5 520 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 MEIS3Q99687 375 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 FER1L6Q2WGJ9 1857 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 SRGAP3O43295 1099 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 KLRK1P26718 216 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 HIBADHP31937 336 aaKnown RBP8.16□□□□□ -1.1
TRAF4-213ENST00000578917 UBE4AQ14139 1066 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 RABL6Q3YEC7 729 aaPredicted RBP8.16□□□□□ -1.1
TRAF4-213ENST00000578917 LRRC24Q50LG9 513 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 IFFO2Q5TF58 517 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 STRIP1Q5VSL9 837 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 TMEM57Q8N5G2 664 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 AGBL3Q8NEM8 1001 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 ZC3H15Q8WU90 426 aaKnown RBP8.16□□□□□ -1.1
TRAF4-213ENST00000578917 DCPSQ96C86 337 aaKnown RBP8.16□□□□□ -1.1
TRAF4-213ENST00000578917 CD209Q9NNX6 404 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 CEP126Q9P2H0 1117 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 HDAC9Q9UKV0 1011 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 MED23Q9ULK4 1368 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 RIPOR2Q9Y4F9 1068 aa8.16□□□□□ -1.1
TRAF4-213ENST00000578917 SBF1O95248 1867 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 CACNA1SQ13698 1873 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 SHTN1A0MZ66 631 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 TMEM88BA6NKF7 163 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 EYA2O00167 538 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 PDE8BO95263 885 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
TRAF4-213ENST00000578917 IFIT1P09914 478 aaKnown RBP8.15□□□□□ -1.1
TRAF4-213ENST00000578917 GYG1P46976 350 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 KIF4BQ2VIQ3 1234 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 PAXIP1Q6ZW49 1069 aaPredicted RBP8.15□□□□□ -1.1
TRAF4-213ENST00000578917 CDC37L1Q7L3B6 337 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 USP48Q86UV5 1035 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 MXD3Q9BW11 206 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 RCAN3Q9UKA8 241 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 ABT1Q9ULW3 272 aaKnown RBP8.15□□□□□ -1.1
TRAF4-213ENST00000578917 TNNQ9UQP3 1299 aa8.15□□□□□ -1.1
TRAF4-213ENST00000578917 COL4A5P29400 1685 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 MYO3BQ8WXR4 1341 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 F8W031 263 aaPredicted RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 TRAF5O00463 557 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 SASH1O94885 1247 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 SLC5A1P13866 664 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 IL15P40933 162 aaPredicted RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 RBM5P52756 815 aaKnown RBP eCLIP8.14□□□□□ -1.118e-14■■■■□ 26.3
TRAF4-213ENST00000578917 HIRAP54198 1017 aaPredicted RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 PTPN12Q05209 780 aaKnown RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 G3BP1Q13283 466 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 OS9Q13438 667 aaPredicted RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 SCARF1Q14162 830 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 PUM3Q15397 648 aaKnown RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 DACT2Q5SW24 774 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 C15orf52Q6ZUT6 534 aaKnown RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 KRT26Q7Z3Y9 468 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 KIAA0825Q8IV33 1275 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 SULF1Q8IWU6 871 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 TRPM4Q8TD43 1214 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 MYOZ2Q9NPC6 264 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 CREBZFQ9NS37 354 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 GNL3LQ9NVN8 582 aaKnown RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 JAG2Q9Y219 1238 aa8.14□□□□□ -1.11
TRAF4-213ENST00000578917 DDX60Q8IY21 1712 aaKnown RBP8.14□□□□□ -1.11
TRAF4-213ENST00000578917 CELF2O95319 508 aaKnown RBP8.13□□□□□ -1.11
TRAF4-213ENST00000578917 IL1R1P14778 569 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 BCAMP50895 628 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 CHAF1AQ13111 956 aaPredicted RBP8.13□□□□□ -1.11
TRAF4-213ENST00000578917 GRM1Q13255 1194 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 DLGAP5Q15398 846 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 GORABQ5T7V8 394 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 PANK1Q8TE04 598 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 LPIN2Q92539 896 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 FAM84BQ96KN1 310 aaPredicted RBP8.13□□□□□ -1.11
TRAF4-213ENST00000578917 NEUROD6Q96NK8 337 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 GLIS2Q9BZE0 524 aaPredicted RBP8.13□□□□□ -1.11
TRAF4-213ENST00000578917 CHMP4BQ9H444 224 aaKnown RBP8.13□□□□□ -1.11
TRAF4-213ENST00000578917 MKRN1Q9UHC7 482 aaKnown RBP8.13□□□□□ -1.11
TRAF4-213ENST00000578917 FBXO3Q9UK99 471 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 IQSEC3Q9UPP2 1182 aaPredicted RBP8.13□□□□□ -1.11
TRAF4-213ENST00000578917 PA2G4Q9UQ80 394 aaKnown RBP8.13□□□□□ -1.11
TRAF4-213ENST00000578917 TAF1P21675 1872 aa8.13□□□□□ -1.11
TRAF4-213ENST00000578917 TIAM2Q8IVF5 1701 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 WDR90Q96KV7 1748 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 CACNA1FO60840 1977 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 MYO1BO43795 1136 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 CIAO1O76071 339 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 EGFRP00533 1210 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 RFX5P48382 616 aaPredicted RBP8.12□□□□□ -1.11
TRAF4-213ENST00000578917 MMP14P50281 582 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 ZNF280AP59817 542 aaPredicted RBP8.12□□□□□ -1.11
TRAF4-213ENST00000578917 ATP2B3Q16720 1220 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 DEFB115Q30KQ5 88 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 MFSD14BQ5SR56 506 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 ANGEL2Q5VTE6 544 aaKnown RBP8.12□□□□□ -1.11
TRAF4-213ENST00000578917 DNAJC5GQ8N7S2 189 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 GMLQ99445 158 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms