RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 FOXP2O15409 715 aa20.75■□□□□ 0.91
ERBB2-205ENST00000578199 CTDNEP1O95476 244 aa20.75■□□□□ 0.91
ERBB2-205ENST00000578199 METTL24Q5JXM2 366 aa20.75■□□□□ 0.91
ERBB2-205ENST00000578199 IFFO2Q5TF58 517 aa20.75■□□□□ 0.91
ERBB2-205ENST00000578199 PUS7LQ9H0K6 701 aaKnown RBP20.75■□□□□ 0.91
ERBB2-205ENST00000578199 FAM184AQ8NB25 1140 aa20.75■□□□□ 0.91
ERBB2-205ENST00000578199 HMGB1P09429 215 aaKnown RBP20.74■□□□□ 0.91
ERBB2-205ENST00000578199 CEBPZQ03701 1054 aaKnown RBP20.74■□□□□ 0.91
ERBB2-205ENST00000578199 PLA2G12BQ9BX93 195 aa20.74■□□□□ 0.91
ERBB2-205ENST00000578199 TRMT112Q9UI30 125 aaKnown RBP20.74■□□□□ 0.91
ERBB2-205ENST00000578199 PFKFB2O60825 505 aa20.74■□□□□ 0.91
ERBB2-205ENST00000578199 PLCB2Q00722 1185 aa20.74■□□□□ 0.91
ERBB2-205ENST00000578199 LEO1Q8WVC0 666 aaPredicted RBP20.74■□□□□ 0.91
ERBB2-205ENST00000578199 RIPOR2Q9Y4F9 1068 aa20.74■□□□□ 0.91
ERBB2-205ENST00000578199 NHSL1Q5SYE7 1610 aa20.74■□□□□ 0.91
ERBB2-205ENST00000578199 PTMAP06454 111 aaKnown RBP20.73■□□□□ 0.91
ERBB2-205ENST00000578199 ATP2B3Q16720 1220 aa20.73■□□□□ 0.91
ERBB2-205ENST00000578199 NSUN7Q8NE18 718 aaKnown RBP20.73■□□□□ 0.91
ERBB2-205ENST00000578199 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.73■□□□□ 0.91
ERBB2-205ENST00000578199 IRS4O14654 1257 aaPredicted RBP20.73■□□□□ 0.91
ERBB2-205ENST00000578199 RESTQ13127 1097 aa20.73■□□□□ 0.91
ERBB2-205ENST00000578199 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.73■□□□□ 0.91
ERBB2-205ENST00000578199 PKNOX2Q96KN3 472 aa20.73■□□□□ 0.91
ERBB2-205ENST00000578199 CNNM1Q9NRU3 951 aa20.73■□□□□ 0.91
ERBB2-205ENST00000578199 ZKSCAN5Q9Y2L8 839 aa20.73■□□□□ 0.91
ERBB2-205ENST00000578199 BCL9O00512 1426 aa20.72■□□□□ 0.91
ERBB2-205ENST00000578199 EXOC5O00471 708 aa20.72■□□□□ 0.91
ERBB2-205ENST00000578199 SMARCC2Q8TAQ2 1214 aa20.72■□□□□ 0.91
ERBB2-205ENST00000578199 DACT1Q9NYF0 836 aa20.72■□□□□ 0.91
ERBB2-205ENST00000578199 CCDC39Q9UFE4 941 aa20.72■□□□□ 0.91
ERBB2-205ENST00000578199 PTPDC1A2A3K4 754 aa20.72■□□□□ 0.91
ERBB2-205ENST00000578199 FAM177BA6PVY3 158 aa20.72■□□□□ 0.91
ERBB2-205ENST00000578199 FGAP02671 866 aa20.72■□□□□ 0.91
ERBB2-205ENST00000578199 PDIA4P13667 645 aaKnown RBP20.72■□□□□ 0.91
ERBB2-205ENST00000578199 MCAMP43121 646 aa20.72■□□□□ 0.91
ERBB2-205ENST00000578199 SCAND2PQ9GZW5 306 aaPredicted RBP20.72■□□□□ 0.91
ERBB2-205ENST00000578199 RIC1Q4ADV7 1423 aa20.71■□□□□ 0.91
ERBB2-205ENST00000578199 ELP1O95163 1332 aa20.71■□□□□ 0.91
ERBB2-205ENST00000578199 GOLGA6L4A6NEF3 574 aa20.71■□□□□ 0.91
ERBB2-205ENST00000578199 ADCY5O95622 1261 aa20.71■□□□□ 0.91
ERBB2-205ENST00000578199 CTSWP56202 376 aa20.71■□□□□ 0.91
ERBB2-205ENST00000578199 GUCY1B3Q02153 619 aa20.71■□□□□ 0.91
ERBB2-205ENST00000578199 CKAP2LQ8IYA6 745 aa20.71■□□□□ 0.91
ERBB2-205ENST00000578199 PGBD1Q96JS3 809 aa20.71■□□□□ 0.91
ERBB2-205ENST00000578199 ZNF830Q96NB3 372 aaPredicted RBP20.71■□□□□ 0.91
ERBB2-205ENST00000578199 FTOQ9C0B1 505 aaKnown RBP eCLIP20.71■□□□□ 0.91
ERBB2-205ENST00000578199 PDIA3P30101 505 aaKnown RBP20.71■□□□□ 0.91
ERBB2-205ENST00000578199 HELBQ8NG08 1087 aaPredicted RBP20.71■□□□□ 0.91
ERBB2-205ENST00000578199 UVSSAQ2YD98 709 aa20.7■□□□□ 0.9
ERBB2-205ENST00000578199 DZIP3Q86Y13 1208 aaKnown RBP20.7■□□□□ 0.9
ERBB2-205ENST00000578199 AGXT2Q9BYV1 514 aa20.7■□□□□ 0.9
ERBB2-205ENST00000578199 FBXO3Q9UK99 471 aa20.7■□□□□ 0.9
ERBB2-205ENST00000578199 ANKRD18BA2A2Z9 1011 aa20.7■□□□□ 0.9
ERBB2-205ENST00000578199 AP5Z1O43299 807 aa20.7■□□□□ 0.9
ERBB2-205ENST00000578199 RAB11FIP4Q86YS3 637 aa20.7■□□□□ 0.9
ERBB2-205ENST00000578199 UBN2Q6ZU65 1347 aa20.69■□□□□ 0.9
ERBB2-205ENST00000578199 NUP62CLQ9H1M0 184 aa20.69■□□□□ 0.9
ERBB2-205ENST00000578199 CDHR2Q9BYE9 1310 aa20.69■□□□□ 0.9
ERBB2-205ENST00000578199 DISP2A7MBM2 1401 aa20.69■□□□□ 0.9
ERBB2-205ENST00000578199 NR1I2O75469 434 aa20.69■□□□□ 0.9
ERBB2-205ENST00000578199 NWD2Q9ULI1 1742 aa20.68■□□□□ 0.9
ERBB2-205ENST00000578199 SNAP23O00161 211 aa20.68■□□□□ 0.9
ERBB2-205ENST00000578199 KDM4AO75164 1064 aa20.68■□□□□ 0.9
ERBB2-205ENST00000578199 APPBP2Q92624 585 aa20.68■□□□□ 0.9
ERBB2-205ENST00000578199 LLPHQ9BRT6 129 aaKnown RBP20.68■□□□□ 0.9
ERBB2-205ENST00000578199 DENND2AQ9ULE3 1009 aa20.68■□□□□ 0.9
ERBB2-205ENST00000578199 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.68■□□□□ 0.9
ERBB2-205ENST00000578199 GPAA1O43292 621 aa20.67■□□□□ 0.9
ERBB2-205ENST00000578199 BICD2Q8TD16 824 aa20.67■□□□□ 0.9
ERBB2-205ENST00000578199 ACSBG1Q96GR2 724 aa20.67■□□□□ 0.9
ERBB2-205ENST00000578199 SPEF2Q9C093 1822 aa20.67■□□□□ 0.9
ERBB2-205ENST00000578199 MAP3K11Q16584 847 aa20.67■□□□□ 0.9
ERBB2-205ENST00000578199 IMMTQ16891 758 aaKnown RBP20.67■□□□□ 0.9
ERBB2-205ENST00000578199 VGLL2Q8N8G2 317 aa20.67■□□□□ 0.9
ERBB2-205ENST00000578199 ZNF500O60304 480 aaPredicted RBP20.66■□□□□ 0.9
ERBB2-205ENST00000578199 OFD1O75665 1012 aa20.66■□□□□ 0.9
ERBB2-205ENST00000578199 ZFYP08048 801 aaPredicted RBP20.66■□□□□ 0.9
ERBB2-205ENST00000578199 CCDC192P0DO97 292 aa20.66■□□□□ 0.9
ERBB2-205ENST00000578199 ADD1P35611 737 aaKnown RBP20.66■□□□□ 0.9
ERBB2-205ENST00000578199 SLC9C2Q5TAH2 1124 aa20.66■□□□□ 0.9
ERBB2-205ENST00000578199 NKX2-3Q8TAU0 364 aa20.66■□□□□ 0.9
ERBB2-205ENST00000578199 TNMDQ9H2S6 317 aa20.66■□□□□ 0.9
ERBB2-205ENST00000578199 ADAMTS2O95450 1211 aa20.66■□□□□ 0.9
ERBB2-205ENST00000578199 PHKA1P46020 1223 aa20.66■□□□□ 0.9
ERBB2-205ENST00000578199 PIH1D3Q9NQM4 214 aaKnown RBP20.66■□□□□ 0.9
ERBB2-205ENST00000578199 LRP6O75581 1613 aa20.65■□□□□ 0.9
ERBB2-205ENST00000578199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.65■□□□□ 0.9
ERBB2-205ENST00000578199 IDH1O75874 414 aaKnown RBP20.65■□□□□ 0.9
ERBB2-205ENST00000578199 PDE8BO95263 885 aa20.65■□□□□ 0.9
ERBB2-205ENST00000578199 LRRFIP1Q32MZ4 808 aaKnown RBP20.65■□□□□ 0.9
ERBB2-205ENST00000578199 OTUD7BQ6GQQ9 843 aa20.65■□□□□ 0.9
ERBB2-205ENST00000578199 TICAM2Q86XR7 235 aa20.65■□□□□ 0.9
ERBB2-205ENST00000578199 ZSCAN16Q9H4T2 348 aaPredicted RBP20.65■□□□□ 0.9
ERBB2-205ENST00000578199 CTNNA3Q9UI47 895 aa20.65■□□□□ 0.9
ERBB2-205ENST00000578199 NUP98P52948 1817 aa20.65■□□□□ 0.9
ERBB2-205ENST00000578199 PDE8AO60658 829 aa20.65■□□□□ 0.9
ERBB2-205ENST00000578199 FDPSP14324 419 aaKnown RBP20.65■□□□□ 0.9
ERBB2-205ENST00000578199 ZNF274Q96GC6 653 aaPredicted RBP20.65■□□□□ 0.9
ERBB2-205ENST00000578199 MRVI1Q9Y6F6 885 aa20.65■□□□□ 0.9
ERBB2-205ENST00000578199 MYO5AQ9Y4I1 1855 aaKnown RBP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms