RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 ZNF75DP51815 510 aa17.37■□□□□ 0.37
PRPF8-216ENST00000577001 UVSSAQ2YD98 709 aa17.37■□□□□ 0.37
PRPF8-216ENST00000577001 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
PRPF8-216ENST00000577001 MICU3Q86XE3 530 aa17.37■□□□□ 0.37
PRPF8-216ENST00000577001 CREBRFQ8IUR6 639 aa17.37■□□□□ 0.37
PRPF8-216ENST00000577001 PUS7LQ9H0K6 701 aaKnown RBP17.37■□□□□ 0.37
PRPF8-216ENST00000577001 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
PRPF8-216ENST00000577001 HIP1O00291 1037 aa17.37■□□□□ 0.37
PRPF8-216ENST00000577001 GNL2Q13823 731 aaKnown RBP17.37■□□□□ 0.37
PRPF8-216ENST00000577001 STK38Q15208 465 aa17.37■□□□□ 0.37
PRPF8-216ENST00000577001 ATP5JP18859 108 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 LMOD1P29536 600 aaPredicted RBP17.36■□□□□ 0.37
PRPF8-216ENST00000577001 ZRSR1Q15695 479 aaKnown RBP17.36■□□□□ 0.37
PRPF8-216ENST00000577001 ZSCAN25Q6NSZ9 544 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 RGPD1P0DJD0 1748 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 COBLO75128 1261 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 HOXB7P09629 217 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 ANKRD1Q15327 319 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 CLSTN2Q9H4D0 955 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 MAST3O60307 1309 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 GOLGA6L6A8MZA4 724 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 PDCL2Q8N4E4 241 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
PRPF8-216ENST00000577001 ATG9AQ7Z3C6 839 aa17.35■□□□□ 0.37
PRPF8-216ENST00000577001 KBTBD3Q8NAB2 608 aa17.35■□□□□ 0.37
PRPF8-216ENST00000577001 CEP126Q9P2H0 1117 aa17.35■□□□□ 0.37
PRPF8-216ENST00000577001 MCM5P33992 734 aa17.35■□□□□ 0.37
PRPF8-216ENST00000577001 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
PRPF8-216ENST00000577001 DHX32Q7L7V1 743 aaKnown RBP17.35■□□□□ 0.37
PRPF8-216ENST00000577001 BABAM1Q9NWV8 329 aa17.35■□□□□ 0.37
PRPF8-216ENST00000577001 NDUFA8P51970 172 aa17.34■□□□□ 0.37
PRPF8-216ENST00000577001 CLIC6Q96NY7 704 aa17.34■□□□□ 0.37
PRPF8-216ENST00000577001 ORC3Q9UBD5 711 aaPredicted RBP17.34■□□□□ 0.37
PRPF8-216ENST00000577001 SMIM22K7EJ46 135 aa17.34■□□□□ 0.37
PRPF8-216ENST00000577001 PDIA3P30101 505 aaKnown RBP17.34■□□□□ 0.37
PRPF8-216ENST00000577001 EVA1CP58658 441 aa17.34■□□□□ 0.37
PRPF8-216ENST00000577001 PDILTQ8N807 584 aa17.34■□□□□ 0.37
PRPF8-216ENST00000577001 CWC25Q9NXE8 425 aaPredicted RBP17.34■□□□□ 0.37
PRPF8-216ENST00000577001 ASAP1Q9ULH1 1129 aa17.34■□□□□ 0.37
PRPF8-216ENST00000577001 MTMR7Q9Y216 660 aa17.34■□□□□ 0.37
PRPF8-216ENST00000577001 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
PRPF8-216ENST00000577001 DPCR1Q3MIW9 517 aa17.33■□□□□ 0.37
PRPF8-216ENST00000577001 HAUS7Q99871 368 aa17.33■□□□□ 0.37
PRPF8-216ENST00000577001 COPRSQ9NQ92 184 aa17.33■□□□□ 0.37
PRPF8-216ENST00000577001 PCDHA7Q9UN72 937 aa17.33■□□□□ 0.37
PRPF8-216ENST00000577001 SKILP12757 684 aa17.33■□□□□ 0.36
PRPF8-216ENST00000577001 FOXO4P98177 505 aa17.33■□□□□ 0.36
PRPF8-216ENST00000577001 FAM208AQ9UK61 1670 aaKnown RBP17.33■□□□□ 0.36
PRPF8-216ENST00000577001 USP42Q9H9J4 1324 aaKnown RBP17.33■□□□□ 0.36
PRPF8-216ENST00000577001 PRC1O43663 620 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 FGAP02671 866 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 DNAJC10Q8IXB1 793 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 XAGE2Q96GT9 111 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 MED23Q9ULK4 1368 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 NFXL1Q6ZNB6 911 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 KCNQ4P56696 695 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 TMC6Q7Z403 805 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 C8orf76Q96K31 380 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
PRPF8-216ENST00000577001 CCDC69A6NI79 296 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 KIF28PB7ZC32 967 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 FDPSP14324 419 aaKnown RBP17.31■□□□□ 0.36
PRPF8-216ENST00000577001 METTL24Q5JXM2 366 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 ILDR1Q86SU0 546 aaPredicted RBP17.31■□□□□ 0.36
PRPF8-216ENST00000577001 CNNM1Q9NRU3 951 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 JAG2Q9Y219 1238 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 KDM6AO15550 1401 aaPredicted RBP17.31■□□□□ 0.36
PRPF8-216ENST00000577001 B4E1Z4 1266 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 RALYLQ86SE5 291 aaKnown RBP17.31■□□□□ 0.36
PRPF8-216ENST00000577001 WTIPA6NIX2 430 aaPredicted RBP17.31■□□□□ 0.36
PRPF8-216ENST00000577001 ATP1A3P13637 1013 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 HLFQ16534 295 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 DDX19AQ9NUU7 478 aaKnown RBP17.31■□□□□ 0.36
PRPF8-216ENST00000577001 IFNKQ9P0W0 207 aa17.31■□□□□ 0.36
PRPF8-216ENST00000577001 FMN2Q9NZ56 1722 aa17.3■□□□□ 0.36
PRPF8-216ENST00000577001 CTDSPL2Q05D32 466 aa17.3■□□□□ 0.36
PRPF8-216ENST00000577001 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
PRPF8-216ENST00000577001 LDHAL6AQ6ZMR3 332 aa17.3■□□□□ 0.36
PRPF8-216ENST00000577001 LRRN4CLQ8ND94 238 aa17.3■□□□□ 0.36
PRPF8-216ENST00000577001 EPC1Q9H2F5 836 aa17.3■□□□□ 0.36
PRPF8-216ENST00000577001 SLC9C2Q5TAH2 1124 aa17.29■□□□□ 0.36
PRPF8-216ENST00000577001 ST7Q9NRC1 585 aa17.29■□□□□ 0.36
PRPF8-216ENST00000577001 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
PRPF8-216ENST00000577001 MEGF6O75095 1541 aa17.29■□□□□ 0.36
PRPF8-216ENST00000577001 RNF113AO15541 343 aaKnown RBP17.29■□□□□ 0.36
PRPF8-216ENST00000577001 MIGA1Q8NAN2 632 aa17.29■□□□□ 0.36
PRPF8-216ENST00000577001 EYA2O00167 538 aa17.29■□□□□ 0.36
PRPF8-216ENST00000577001 FOXN1O15353 648 aa17.29■□□□□ 0.36
PRPF8-216ENST00000577001 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
PRPF8-216ENST00000577001 KRT32Q14532 448 aa17.29■□□□□ 0.36
PRPF8-216ENST00000577001 PLBD2Q8NHP8 589 aa17.29■□□□□ 0.36
PRPF8-216ENST00000577001 SYNE3Q6ZMZ3 975 aa17.28■□□□□ 0.36
PRPF8-216ENST00000577001 GRAMD1CQ8IYS0 662 aa17.28■□□□□ 0.36
PRPF8-216ENST00000577001 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
PRPF8-216ENST00000577001 HMG20BQ9P0W2 317 aa17.28■□□□□ 0.36
PRPF8-216ENST00000577001 CCDC158Q5M9N0 1113 aa17.28■□□□□ 0.36
PRPF8-216ENST00000577001 CCDC112Q8NEF3 446 aa17.28■□□□□ 0.36
PRPF8-216ENST00000577001 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.36
PRPF8-216ENST00000577001 GREM2Q9H772 168 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms