RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 STOX1Q6ZVD7 989 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 PHACTR2O75167 634 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 ETF1P62495 437 aaKnown RBP16.87■□□□□ 0.29
SCARF1-209ENST00000576012 NSUN7Q8NE18 718 aaKnown RBP16.87■□□□□ 0.29
SCARF1-209ENST00000576012 MRPS27Q92552 414 aaKnown RBP16.87■□□□□ 0.29
SCARF1-209ENST00000576012 NEUROD6Q96NK8 337 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 DESI2Q9BSY9 194 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 CTAGE5O15320 804 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 CTDNEP1O95476 244 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 SLC3A2P08195 630 aaKnown RBP16.87■□□□□ 0.29
SCARF1-209ENST00000576012 RCOR1Q9UKL0 485 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 SMC1AQ14683 1233 aaKnown RBP16.86■□□□□ 0.29
SCARF1-209ENST00000576012 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
SCARF1-209ENST00000576012 FANCCQ00597 558 aa16.86■□□□□ 0.29
SCARF1-209ENST00000576012 WWC2Q6AWC2 1192 aa16.86■□□□□ 0.29
SCARF1-209ENST00000576012 IRX2Q9BZI1 471 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-209ENST00000576012 CEP170BQ9Y4F5 1589 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-209ENST00000576012 UBASH3AP57075 661 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 TPM4P67936 248 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 ZSCAN26Q16670 478 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 KCNB2Q92953 911 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
SCARF1-209ENST00000576012 ZNF396Q96N95 335 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-209ENST00000576012 FAM53CQ9NYF3 392 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 HIP1O00291 1037 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 CAVIN2O95810 425 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 HSP90AB3PQ58FF7 597 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 ERC1Q8IUD2 1116 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 ABTB2Q8N961 1025 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 PLEKHA4Q9H4M7 779 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 L2HGDHQ9H9P8 463 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 KIAA1468Q9P260 1216 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 C3P01024 1663 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 ENGASEQ8NFI3 743 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 WDR24Q96S15 920 aa16.85■□□□□ 0.29
SCARF1-209ENST00000576012 PUF60Q9UHX1 559 aaKnown RBP16.85■□□□□ 0.29
SCARF1-209ENST00000576012 COL15A1P39059 1388 aa16.84■□□□□ 0.29
SCARF1-209ENST00000576012 NPHP4O75161 1426 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-209ENST00000576012 KIF2AO00139 706 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-209ENST00000576012 RIC3Q7Z5B4 369 aa16.84■□□□□ 0.29
SCARF1-209ENST00000576012 CNKSR2Q8WXI2 1034 aa16.84■□□□□ 0.29
SCARF1-209ENST00000576012 FLT4P35916 1363 aa16.84■□□□□ 0.29
SCARF1-209ENST00000576012 TFRCP02786 760 aaKnown RBP16.84■□□□□ 0.29
SCARF1-209ENST00000576012 ADKP55263 362 aaKnown RBP16.84■□□□□ 0.29
SCARF1-209ENST00000576012 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
SCARF1-209ENST00000576012 SPECC1Q5M775 1068 aa16.84■□□□□ 0.29
SCARF1-209ENST00000576012 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.84■□□□□ 0.29
SCARF1-209ENST00000576012 SETD1BQ9UPS6 1966 aaKnown RBP16.84■□□□□ 0.29
SCARF1-209ENST00000576012 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
SCARF1-209ENST00000576012 TFCP2Q12800 502 aa16.83■□□□□ 0.29
SCARF1-209ENST00000576012 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.29
SCARF1-209ENST00000576012 KAZALD1Q96I82 304 aa16.83■□□□□ 0.29
SCARF1-209ENST00000576012 DBNDD2Q9BQY9 259 aa16.83■□□□□ 0.29
SCARF1-209ENST00000576012 GRM8O00222 908 aa16.83■□□□□ 0.28
SCARF1-209ENST00000576012 HOXC9P31274 260 aa16.83■□□□□ 0.28
SCARF1-209ENST00000576012 CCDC93Q567U6 631 aa16.83■□□□□ 0.28
SCARF1-209ENST00000576012 TEX2Q8IWB9 1127 aa16.83■□□□□ 0.28
SCARF1-209ENST00000576012 CCDC150Q8NCX0 1101 aa16.83■□□□□ 0.28
SCARF1-209ENST00000576012 ARHGEF10O15013 1369 aa16.83■□□□□ 0.28
SCARF1-209ENST00000576012 GOLIM4O00461 696 aa16.83■□□□□ 0.28
SCARF1-209ENST00000576012 ZNF530Q6P9A1 599 aaPredicted RBP16.83■□□□□ 0.28
SCARF1-209ENST00000576012 FMR1NBQ8N0W7 255 aaPredicted RBP16.83■□□□□ 0.28
SCARF1-209ENST00000576012 NFATC2IPQ8NCF5 419 aa16.83■□□□□ 0.28
SCARF1-209ENST00000576012 TULP2O00295 520 aa16.82■□□□□ 0.28
SCARF1-209ENST00000576012 ZNF202O95125 648 aa16.82■□□□□ 0.28
SCARF1-209ENST00000576012 RXRAP19793 462 aa16.82■□□□□ 0.28
SCARF1-209ENST00000576012 CPLX3Q8WVH0 158 aa16.82■□□□□ 0.28
SCARF1-209ENST00000576012 OSBPL5Q9H0X9 879 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-209ENST00000576012 SUGCTQ9HAC7 445 aa16.82■□□□□ 0.28
SCARF1-209ENST00000576012 TOMM22Q9NS69 142 aa16.82■□□□□ 0.28
SCARF1-209ENST00000576012 DBNLQ9UJU6 430 aaKnown RBP16.82■□□□□ 0.28
SCARF1-209ENST00000576012 UBR1Q8IWV7 1749 aa16.82■□□□□ 0.28
SCARF1-209ENST00000576012 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-209ENST00000576012 TBC1D8O95759 1140 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 TOP1P11387 765 aaKnown RBP16.81■□□□□ 0.28
SCARF1-209ENST00000576012 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 VPS18Q9P253 973 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 BCCIPQ9P287 314 aaKnown RBP eCLIP16.81■□□□□ 0.28
SCARF1-209ENST00000576012 TADA3O75528 432 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 CASQ1P31415 396 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 MTX1Q13505 466 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 PNOCQ13519 176 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 SYNE3Q6ZMZ3 975 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 PARD6BQ9BYG5 372 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 LZTFL1Q9NQ48 299 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 ZRANB2O95218 330 aaKnown RBP eCLIP16.81■□□□□ 0.28
SCARF1-209ENST00000576012 GPS2Q13227 327 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 KRT32Q14532 448 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
SCARF1-209ENST00000576012 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-209ENST00000576012 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
SCARF1-209ENST00000576012 ATP5J2-PTCD1G3V325 749 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
SCARF1-209ENST00000576012 AIFM3Q96NN9 605 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 ARFGAP3Q9NP61 516 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 MYO1CO00159 1063 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 TRIM65Q6PJ69 517 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms