RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	ZNF526	Q8TF50	670 aa	Predicted RBP	12.53	□□□□□ -0.4
NXN-208	ENST00000575171	SOS1	Q07889	1333 aa	Predicted RBP	12.53	□□□□□ -0.4
NXN-208	ENST00000575171	VIRMA	Q69YN4	1812 aa	Known RBP	12.53	□□□□□ -0.4
NXN-208	ENST00000575171	MYH14	Q7Z406	1995 aa	Known RBP	12.52	□□□□□ -0.4
NXN-208	ENST00000575171	QPCT	Q16769	361 aa		12.52	□□□□□ -0.41
NXN-208	ENST00000575171	SBF1	O95248	1867 aa		12.52	□□□□□ -0.41
NXN-208	ENST00000575171		E9PSI1	815 aa		12.51	□□□□□ -0.41
NXN-208	ENST00000575171	MYL6B	P14649	208 aa		12.51	□□□□□ -0.41
NXN-208	ENST00000575171	RFC4	P35249	363 aa		12.51	□□□□□ -0.41
NXN-208	ENST00000575171	HDGFL1	Q5TGJ6	251 aa		12.51	□□□□□ -0.41
NXN-208	ENST00000575171	DNAJC5G	Q8N7S2	189 aa		12.51	□□□□□ -0.41
NXN-208	ENST00000575171	C8orf58	Q8NAV2	365 aa		12.51	□□□□□ -0.41
NXN-208	ENST00000575171	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.51	□□□□□ -0.41
NXN-208	ENST00000575171	COL15A1	P39059	1388 aa		12.51	□□□□□ -0.41
NXN-208	ENST00000575171	IL6ST	P40189	918 aa	Predicted RBP	12.5	□□□□□ -0.41
NXN-208	ENST00000575171	EXOSC9	Q06265	439 aa	Known RBP	12.5	□□□□□ -0.41
NXN-208	ENST00000575171	NBPF10	Q6P3W6	841 aa	Known RBP	12.5	□□□□□ -0.41
NXN-208	ENST00000575171	NBPF15	Q8N660	670 aa		12.5	□□□□□ -0.41
NXN-208	ENST00000575171	TSPYL6	Q8N831	410 aa		12.5	□□□□□ -0.41
NXN-208	ENST00000575171	PRR7	Q8TB68	274 aa		12.5	□□□□□ -0.41
NXN-208	ENST00000575171	PRDM9	Q9NQV7	894 aa		12.5	□□□□□ -0.41
NXN-208	ENST00000575171	C10orf71	Q711Q0	1435 aa		12.5	□□□□□ -0.41
NXN-208	ENST00000575171		A0A087WZG4	1122 aa		12.49	□□□□□ -0.41
NXN-208	ENST00000575171	ANXA1	P04083	346 aa		12.49	□□□□□ -0.41
NXN-208	ENST00000575171	HOXB7	P09629	217 aa		12.49	□□□□□ -0.41
NXN-208	ENST00000575171	EIF5	P55010	431 aa	Known RBP	12.49	□□□□□ -0.41
NXN-208	ENST00000575171	SLFN5	Q08AF3	891 aa		12.49	□□□□□ -0.41
NXN-208	ENST00000575171	TWISTNB	Q3B726	338 aa	Predicted RBP	12.49	□□□□□ -0.41
NXN-208	ENST00000575171	SRP68	Q9UHB9	627 aa	Known RBP	12.49	□□□□□ -0.41
NXN-208	ENST00000575171	ERBB4	Q15303	1308 aa		12.48	□□□□□ -0.41
NXN-208	ENST00000575171	TCERG1	O14776	1098 aa	Known RBP	12.48	□□□□□ -0.41
NXN-208	ENST00000575171	USPL1	Q5W0Q7	1092 aa		12.48	□□□□□ -0.41
NXN-208	ENST00000575171	DZIP3	Q86Y13	1208 aa	Known RBP	12.48	□□□□□ -0.41
NXN-208	ENST00000575171	YTHDC1	Q96MU7	727 aa	Known RBP	12.48	□□□□□ -0.41
NXN-208	ENST00000575171	CHPF2	Q9P2E5	772 aa		12.48	□□□□□ -0.41
NXN-208	ENST00000575171	WWC3	Q9ULE0	1092 aa		12.48	□□□□□ -0.41
NXN-208	ENST00000575171	TBC1D2B	Q9UPU7	963 aa		12.48	□□□□□ -0.41
NXN-208	ENST00000575171	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.48	□□□□□ -0.41
NXN-208	ENST00000575171	ZBED9	Q6R2W3	1325 aa		12.47	□□□□□ -0.41
NXN-208	ENST00000575171	USP42	Q9H9J4	1324 aa	Known RBP	12.47	□□□□□ -0.41
NXN-208	ENST00000575171	MMP16	P51512	607 aa		12.47	□□□□□ -0.41
NXN-208	ENST00000575171	TMEM132A	Q24JP5	1023 aa		12.47	□□□□□ -0.41
NXN-208	ENST00000575171	PROSER3	Q2NL68	480 aa		12.47	□□□□□ -0.41
NXN-208	ENST00000575171	CFAP99	D6REC4	459 aa		12.46	□□□□□ -0.41
NXN-208	ENST00000575171	RNF223	E7ERA6	249 aa		12.46	□□□□□ -0.41
NXN-208	ENST00000575171	DXO	O77932	396 aa	Known RBP	12.46	□□□□□ -0.41
NXN-208	ENST00000575171	JUND	P17535	347 aa		12.46	□□□□□ -0.41
NXN-208	ENST00000575171	AIMP1	Q12904	312 aa	Known RBP	12.46	□□□□□ -0.41
NXN-208	ENST00000575171	RTL5	Q5HYW3	569 aa	Predicted RBP	12.46	□□□□□ -0.41
NXN-208	ENST00000575171	CCDC30	Q5VVM6	783 aa		12.46	□□□□□ -0.41
NXN-208	ENST00000575171	KIF6	Q6ZMV9	814 aa		12.46	□□□□□ -0.41
NXN-208	ENST00000575171	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
NXN-208	ENST00000575171	NARF	Q9UHQ1	456 aa		12.46	□□□□□ -0.41
NXN-208	ENST00000575171	GYS1	P13807	737 aa		12.45	□□□□□ -0.42
NXN-208	ENST00000575171	PPP2R2D	Q66LE6	453 aa		12.45	□□□□□ -0.42
NXN-208	ENST00000575171	DESI1	Q6ICB0	168 aa		12.45	□□□□□ -0.42
NXN-208	ENST00000575171	STK31	Q9BXU1	1019 aa		12.45	□□□□□ -0.42
NXN-208	ENST00000575171	CHMP4A	Q9BY43	222 aa		12.45	□□□□□ -0.42
NXN-208	ENST00000575171	DBF4	Q9UBU7	674 aa	Predicted RBP	12.45	□□□□□ -0.42
NXN-208	ENST00000575171	LAMB4	A4D0S4	1761 aa		12.45	□□□□□ -0.42
NXN-208	ENST00000575171	DLEC1	Q9Y238	1755 aa		12.44	□□□□□ -0.42
NXN-208	ENST00000575171	VAMP4	O75379	141 aa		12.44	□□□□□ -0.42
NXN-208	ENST00000575171	TOMM70	O94826	608 aa		12.44	□□□□□ -0.42
NXN-208	ENST00000575171	BICDL1	Q6ZP65	573 aa		12.44	□□□□□ -0.42
NXN-208	ENST00000575171	TTLL7	Q6ZT98	887 aa		12.44	□□□□□ -0.42
NXN-208	ENST00000575171	COPS6	Q7L5N1	327 aa		12.44	□□□□□ -0.42
NXN-208	ENST00000575171	ANKLE1	Q8NAG6	615 aa		12.44	□□□□□ -0.42
NXN-208	ENST00000575171	XAGE3	Q8WTP9	111 aa		12.44	□□□□□ -0.42
NXN-208	ENST00000575171	TSC1	Q92574	1164 aa		12.44	□□□□□ -0.42
NXN-208	ENST00000575171	PPEF1	O14829	653 aa	Predicted RBP	12.43	□□□□□ -0.42
NXN-208	ENST00000575171	CAMTA2	O94983	1202 aa		12.43	□□□□□ -0.42
NXN-208	ENST00000575171	MMP10	P09238	476 aa		12.43	□□□□□ -0.42
NXN-208	ENST00000575171	NLGN1	Q8N2Q7	840 aa		12.43	□□□□□ -0.42
NXN-208	ENST00000575171	HELB	Q8NG08	1087 aa	Predicted RBP	12.43	□□□□□ -0.42
NXN-208	ENST00000575171	NMRK2	Q9NPI5	230 aa		12.43	□□□□□ -0.42
NXN-208	ENST00000575171	HYPK	Q9NX55	129 aa		12.43	□□□□□ -0.42
NXN-208	ENST00000575171	LRP10	Q7Z4F1	713 aa		12.42	□□□□□ -0.42
NXN-208	ENST00000575171	TRMT2A	Q8IZ69	625 aa	Known RBP	12.42	□□□□□ -0.42
NXN-208	ENST00000575171	PHAX	Q9H814	394 aa	Known RBP	12.42	□□□□□ -0.42
NXN-208	ENST00000575171	ZNF652	Q9Y2D9	606 aa		12.42	□□□□□ -0.42
NXN-208	ENST00000575171	CCDC88A	Q3V6T2	1871 aa		12.42	□□□□□ -0.42
NXN-208	ENST00000575171	AFDN	P55196	1824 aa	Known RBP	12.41	□□□□□ -0.42
NXN-208	ENST00000575171	MAP3K15	Q6ZN16	1313 aa		12.41	□□□□□ -0.42
NXN-208	ENST00000575171	TBC1D9B	Q66K14	1250 aa		12.41	□□□□□ -0.42
NXN-208	ENST00000575171	JMY	Q8N9B5	988 aa		12.41	□□□□□ -0.42
NXN-208	ENST00000575171	FCF1	Q9Y324	198 aa	Known RBP	12.41	□□□□□ -0.42
NXN-208	ENST00000575171	PARP3	Q9Y6F1	533 aa		12.41	□□□□□ -0.42
NXN-208	ENST00000575171	NRXN2	Q9P2S2	1712 aa		12.4	□□□□□ -0.42
NXN-208	ENST00000575171	KCNA3	P22001	575 aa		12.4	□□□□□ -0.42
NXN-208	ENST00000575171	RFC5	P40937	340 aa		12.4	□□□□□ -0.42
NXN-208	ENST00000575171	TGFB2	P61812	414 aa		12.4	□□□□□ -0.42
NXN-208	ENST00000575171	NFIX	Q14938	502 aa		12.4	□□□□□ -0.42
NXN-208	ENST00000575171	HLF	Q16534	295 aa		12.4	□□□□□ -0.42
NXN-208	ENST00000575171	TIAM2	Q8IVF5	1701 aa		12.4	□□□□□ -0.43
NXN-208	ENST00000575171		A0A0G2JLW4	131 aa		12.39	□□□□□ -0.43
NXN-208	ENST00000575171	ERVV-1	B6SEH8	477 aa		12.39	□□□□□ -0.43
NXN-208	ENST00000575171	DDR1	Q08345	913 aa		12.39	□□□□□ -0.43
NXN-208	ENST00000575171	PTPRN	Q16849	979 aa		12.39	□□□□□ -0.43
NXN-208	ENST00000575171	BCL2L13	Q9BXK5	485 aa		12.39	□□□□□ -0.43
NXN-208	ENST00000575171	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.39	□□□□□ -0.43

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