RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ANO6Q4KMQ2 910 aa10.54□□□□□ -0.72
NCBP3-204ENST00000574911 FBXL16Q8N461 479 aa10.54□□□□□ -0.72
NCBP3-204ENST00000574911 KCNF1Q9H3M0 494 aa10.54□□□□□ -0.72
NCBP3-204ENST00000574911 CBX8Q9HC52 389 aa10.54□□□□□ -0.72
NCBP3-204ENST00000574911 DYNC1I1O14576 645 aa10.53□□□□□ -0.72
NCBP3-204ENST00000574911 BICD2Q8TD16 824 aa10.53□□□□□ -0.72
NCBP3-204ENST00000574911 ZNF274Q96GC6 653 aaPredicted RBP10.53□□□□□ -0.72
NCBP3-204ENST00000574911 PDCL3Q9H2J4 239 aa10.53□□□□□ -0.72
NCBP3-204ENST00000574911 CEP126Q9P2H0 1117 aa10.53□□□□□ -0.72
NCBP3-204ENST00000574911 RCOR1Q9UKL0 485 aa10.53□□□□□ -0.72
NCBP3-204ENST00000574911 PDIA3P30101 505 aaKnown RBP10.53□□□□□ -0.72
NCBP3-204ENST00000574911 LUZP1Q86V48 1076 aa10.53□□□□□ -0.72
NCBP3-204ENST00000574911 OSBP2Q969R2 916 aa10.53□□□□□ -0.72
NCBP3-204ENST00000574911 PLA2G12BQ9BX93 195 aa10.53□□□□□ -0.72
NCBP3-204ENST00000574911 SOS2Q07890 1332 aaPredicted RBP10.53□□□□□ -0.72
NCBP3-204ENST00000574911 TOGARAM1Q9Y4F4 1720 aa10.52□□□□□ -0.72
NCBP3-204ENST00000574911 EVCP57679 992 aa10.52□□□□□ -0.72
NCBP3-204ENST00000574911 ATL3Q6DD88 541 aa10.52□□□□□ -0.72
NCBP3-204ENST00000574911 C17orf53Q8N3J3 647 aaPredicted RBP10.52□□□□□ -0.72
NCBP3-204ENST00000574911 TDRD7Q8NHU6 1098 aaKnown RBP10.52□□□□□ -0.72
NCBP3-204ENST00000574911 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.72
NCBP3-204ENST00000574911 KIF3AQ9Y496 699 aa10.52□□□□□ -0.72
NCBP3-204ENST00000574911 MYH15Q9Y2K3 1946 aa10.52□□□□□ -0.73
NCBP3-204ENST00000574911 GOLGA6L6A8MZA4 724 aa10.52□□□□□ -0.73
NCBP3-204ENST00000574911 CSF1RP07333 972 aa10.52□□□□□ -0.73
NCBP3-204ENST00000574911 ADORA1P30542 326 aa10.52□□□□□ -0.73
NCBP3-204ENST00000574911 CCT2P78371 535 aaKnown RBP10.52□□□□□ -0.73
NCBP3-204ENST00000574911 CCDC57Q2TAC2 916 aa10.52□□□□□ -0.73
NCBP3-204ENST00000574911 CCDC158Q5M9N0 1113 aa10.52□□□□□ -0.73
NCBP3-204ENST00000574911 KIAA1524Q8TCG1 905 aa10.52□□□□□ -0.73
NCBP3-204ENST00000574911 XAGE2Q96GT9 111 aa10.52□□□□□ -0.73
NCBP3-204ENST00000574911 FOXP2O15409 715 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 PCCAP05165 728 aaPredicted RBP10.51□□□□□ -0.73
NCBP3-204ENST00000574911 LRRFIP1Q32MZ4 808 aaKnown RBP10.51□□□□□ -0.73
NCBP3-204ENST00000574911 TTC39AQ5SRH9 613 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 TTLL5Q6EMB2 1281 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 CHMP4CQ96CF2 233 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 ABCA3Q99758 1704 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 NWD2Q9ULI1 1742 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 ZFYP08048 801 aaPredicted RBP10.51□□□□□ -0.73
NCBP3-204ENST00000574911 FKBP4Q02790 459 aaKnown RBP eCLIP10.51□□□□□ -0.73
NCBP3-204ENST00000574911 PLA2G4DQ86XP0 818 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 SPC24Q8NBT2 197 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 MYRIPQ8NFW9 859 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 PRIMPOLQ96LW4 560 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 NCOA5Q9HCD5 579 aaKnown RBP10.51□□□□□ -0.73
NCBP3-204ENST00000574911 CTNNA3Q9UI47 895 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 PYCARDQ9ULZ3 195 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 ABCC12Q96J65 1359 aa10.51□□□□□ -0.73
NCBP3-204ENST00000574911 CAVIN2O95810 425 aa10.5□□□□□ -0.73
NCBP3-204ENST00000574911 RBM10P98175 930 aaKnown RBP10.5□□□□□ -0.73
NCBP3-204ENST00000574911 DNTTIP2Q5QJE6 756 aaKnown RBP10.5□□□□□ -0.73
NCBP3-204ENST00000574911 CHST3Q7LGC8 479 aa10.5□□□□□ -0.73
NCBP3-204ENST00000574911 ILDR1Q86SU0 546 aaPredicted RBP10.5□□□□□ -0.73
NCBP3-204ENST00000574911 ZNF396Q96N95 335 aaPredicted RBP10.5□□□□□ -0.73
NCBP3-204ENST00000574911 ZNF75DP51815 510 aa10.5□□□□□ -0.73
NCBP3-204ENST00000574911 FOSBP53539 338 aa10.5□□□□□ -0.73
NCBP3-204ENST00000574911 CCAR1Q8IX12 1150 aaKnown RBP10.5□□□□□ -0.73
NCBP3-204ENST00000574911 VSIG10Q8N0Z9 540 aa10.5□□□□□ -0.73
NCBP3-204ENST00000574911 ZBTB38Q8NAP3 1195 aaPredicted RBP10.5□□□□□ -0.73
NCBP3-204ENST00000574911 USP28Q96RU2 1077 aa10.5□□□□□ -0.73
NCBP3-204ENST00000574911 GOLPH3LQ9H4A5 285 aa10.5□□□□□ -0.73
NCBP3-204ENST00000574911 CARMIL3Q8ND23 1372 aa10.5□□□□□ -0.73
NCBP3-204ENST00000574911 CTAGE5O15320 804 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 FDPSP14324 419 aaKnown RBP10.49□□□□□ -0.73
NCBP3-204ENST00000574911 CEBPZQ03701 1054 aaKnown RBP10.49□□□□□ -0.73
NCBP3-204ENST00000574911 SCARF1Q14162 830 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 GORABQ5T7V8 394 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 KIF6Q6ZMV9 814 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.49□□□□□ -0.73
NCBP3-204ENST00000574911 TEX13AQ9BXU3 409 aaPredicted RBP10.49□□□□□ -0.73
NCBP3-204ENST00000574911 FTOQ9C0B1 505 aaKnown RBP eCLIP10.49□□□□□ -0.73
NCBP3-204ENST00000574911 DNAJC25Q9H1X3 360 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 TMOD3Q9NYL9 352 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 RIC1Q4ADV7 1423 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 ZAP70P43403 619 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 ZNF165P49910 485 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 SNW1Q13573 536 aaKnown RBP10.49□□□□□ -0.73
NCBP3-204ENST00000574911 DNAJC10Q8IXB1 793 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 ENGASEQ8NFI3 743 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 APPBP2Q92624 585 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 FAM89AQ96GI7 184 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 MAP7D2Q96T17 732 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 CDHR2Q9BYE9 1310 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 FGAP02671 866 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 PTGS1P23219 599 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 IQCB1Q15051 598 aa10.49□□□□□ -0.73
NCBP3-204ENST00000574911 IMMTQ16891 758 aaKnown RBP10.49□□□□□ -0.73
NCBP3-204ENST00000574911 MB21D2Q8IYB1 491 aaPredicted RBP10.49□□□□□ -0.73
NCBP3-204ENST00000574911 GPHNQ9NQX3 736 aaPredicted RBP10.49□□□□□ -0.73
NCBP3-204ENST00000574911 GTF2F1P35269 517 aaKnown RBP eCLIP10.48□□□□□ -0.73
NCBP3-204ENST00000574911 IFIT5Q13325 482 aaKnown RBP10.48□□□□□ -0.73
NCBP3-204ENST00000574911 WASHC4Q2M389 1173 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 PUS7LQ9H0K6 701 aaKnown RBP10.48□□□□□ -0.73
NCBP3-204ENST00000574911 STRN4Q9NRL3 753 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 FAM13BQ9NYF5 915 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
NCBP3-204ENST00000574911 DDX60Q8IY21 1712 aaKnown RBP10.48□□□□□ -0.73
NCBP3-204ENST00000574911 MAP3K15Q6ZN16 1313 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 EVA1CP58658 441 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms