RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 FMR1Q06787 632 aaKnown RBP eCLIP13.34□□□□□ -0.27
LITAF-216ENST00000574848 RABL6Q3YEC7 729 aaPredicted RBP13.34□□□□□ -0.27
LITAF-216ENST00000574848 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 CST9Q5W186 159 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 SLC4A10Q6U841 1118 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 CDC37L1Q7L3B6 337 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 USP17L1Q7RTZ2 530 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 SAMD7Q7Z3H4 446 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 GLIS2Q9BZE0 524 aaPredicted RBP13.34□□□□□ -0.27
LITAF-216ENST00000574848 C9orf78Q9NZ63 289 aaPredicted RBP13.34□□□□□ -0.27
LITAF-216ENST00000574848 MYO3BQ8WXR4 1341 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 NBPF7P0C2Y1 421 aaPredicted RBP13.33□□□□□ -0.28
LITAF-216ENST00000574848 KIF4BQ2VIQ3 1234 aa13.33□□□□□ -0.28
LITAF-216ENST00000574848 TBC1D10BQ4KMP7 808 aaPredicted RBP13.33□□□□□ -0.28
LITAF-216ENST00000574848 DACT2Q5SW24 774 aa13.33□□□□□ -0.28
LITAF-216ENST00000574848 STRIP1Q5VSL9 837 aa13.33□□□□□ -0.28
LITAF-216ENST00000574848 TXNRD3Q86VQ6 643 aa13.33□□□□□ -0.28
LITAF-216ENST00000574848 SUCLG2Q96I99 432 aa13.33□□□□□ -0.28
LITAF-216ENST00000574848 HHIPL1Q96JK4 782 aa13.33□□□□□ -0.28
LITAF-216ENST00000574848 RCAN3Q9UKA8 241 aa13.33□□□□□ -0.28
LITAF-216ENST00000574848 TLL2Q9Y6L7 1015 aa13.33□□□□□ -0.28
LITAF-216ENST00000574848 ARAP2Q8WZ64 1704 aa13.33□□□□□ -0.28
LITAF-216ENST00000574848 KLRK1P26718 216 aa13.32□□□□□ -0.28
LITAF-216ENST00000574848 MMP14P50281 582 aa13.32□□□□□ -0.28
LITAF-216ENST00000574848 CCDC57Q2TAC2 916 aa13.32□□□□□ -0.28
LITAF-216ENST00000574848 DEFB115Q30KQ5 88 aa13.32□□□□□ -0.28
LITAF-216ENST00000574848 ABT1Q9ULW3 272 aaKnown RBP13.32□□□□□ -0.28
LITAF-216ENST00000574848 SAPCD2Q86UD0 394 aa13.31□□□□□ -0.28
LITAF-216ENST00000574848 SMC4Q9NTJ3 1288 aa13.31□□□□□ -0.28
LITAF-216ENST00000574848 PPP4R2Q9NY27 417 aa13.31□□□□□ -0.28
LITAF-216ENST00000574848 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
LITAF-216ENST00000574848 PITPNM2Q9BZ72 1349 aa13.31□□□□□ -0.28
LITAF-216ENST00000574848 POLR2AP24928 1970 aaKnown RBP13.31□□□□□ -0.28
LITAF-216ENST00000574848 CELF2O95319 508 aaKnown RBP13.3□□□□□ -0.28
LITAF-216ENST00000574848 USP17L8P0C7I0 530 aa13.3□□□□□ -0.28
LITAF-216ENST00000574848 KRT26Q7Z3Y9 468 aa13.3□□□□□ -0.28
LITAF-216ENST00000574848 ANKRD44Q8N8A2 993 aa13.3□□□□□ -0.28
LITAF-216ENST00000574848 BICC1Q9H694 974 aaKnown RBP13.3□□□□□ -0.28
LITAF-216ENST00000574848 MYOZ2Q9NPC6 264 aa13.3□□□□□ -0.28
LITAF-216ENST00000574848 GGA3Q9NZ52 723 aa13.3□□□□□ -0.28
LITAF-216ENST00000574848 WDR33Q9C0J8 1336 aaKnown RBP13.3□□□□□ -0.28
LITAF-216ENST00000574848 ECM29Q5VYK3 1845 aa13.29□□□□□ -0.28
LITAF-216ENST00000574848 IL1R1P14778 569 aa13.29□□□□□ -0.28
LITAF-216ENST00000574848 ECE1P42892 770 aa13.29□□□□□ -0.28
LITAF-216ENST00000574848 KCNJ4P48050 445 aa13.29□□□□□ -0.28
LITAF-216ENST00000574848 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
LITAF-216ENST00000574848 LDHAL6AQ6ZMR3 332 aa13.29□□□□□ -0.28
LITAF-216ENST00000574848 DCPSQ96C86 337 aaKnown RBP13.29□□□□□ -0.28
LITAF-216ENST00000574848 ZNF594Q96JF6 807 aaPredicted RBP13.29□□□□□ -0.28
LITAF-216ENST00000574848 USP44Q9H0E7 712 aa13.29□□□□□ -0.28
LITAF-216ENST00000574848 CD209Q9NNX6 404 aa13.29□□□□□ -0.28
LITAF-216ENST00000574848 PAPPA2Q9BXP8 1791 aa13.29□□□□□ -0.28
LITAF-216ENST00000574848 TAF5LO75529 589 aa13.28□□□□□ -0.28
LITAF-216ENST00000574848 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
LITAF-216ENST00000574848 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
LITAF-216ENST00000574848 USP48Q86UV5 1035 aa13.28□□□□□ -0.28
LITAF-216ENST00000574848 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.28□□□□□ -0.28
LITAF-216ENST00000574848 CAPNS2Q96L46 248 aa13.28□□□□□ -0.28
LITAF-216ENST00000574848 CNNM1Q9NRU3 951 aa13.28□□□□□ -0.28
LITAF-216ENST00000574848 WBP1LQ9NX94 342 aa13.28□□□□□ -0.28
LITAF-216ENST00000574848 ASTN2O75129 1339 aaPredicted RBP13.28□□□□□ -0.28
LITAF-216ENST00000574848 KIF16BQ96L93 1317 aa13.28□□□□□ -0.28
LITAF-216ENST00000574848 ADM5C9JUS6 153 aa13.27□□□□□ -0.29
LITAF-216ENST00000574848 SNAP23O00161 211 aa13.27□□□□□ -0.29
LITAF-216ENST00000574848 RARSP54136 660 aaKnown RBP13.27□□□□□ -0.29
LITAF-216ENST00000574848 FKBP1AP62942 108 aaKnown RBP13.27□□□□□ -0.29
LITAF-216ENST00000574848 UBE4AQ14139 1066 aa13.27□□□□□ -0.29
LITAF-216ENST00000574848 SCARF1Q14162 830 aa13.27□□□□□ -0.29
LITAF-216ENST00000574848 RBM26Q5T8P6 1007 aaKnown RBP13.27□□□□□ -0.29
LITAF-216ENST00000574848 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.29
LITAF-216ENST00000574848 ZNF804AQ7Z570 1209 aa13.27□□□□□ -0.29
LITAF-216ENST00000574848 SULF1Q8IWU6 871 aa13.27□□□□□ -0.29
LITAF-216ENST00000574848 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
LITAF-216ENST00000574848 RIPOR2Q9Y4F9 1068 aa13.27□□□□□ -0.29
LITAF-216ENST00000574848 MROH5Q6ZUA9 1318 aa13.27□□□□□ -0.29
LITAF-216ENST00000574848 FOXN1O15353 648 aa13.26□□□□□ -0.29
LITAF-216ENST00000574848 COL1A1P02452 1464 aaPredicted RBP13.26□□□□□ -0.29
LITAF-216ENST00000574848 MAP2K1Q02750 393 aaPredicted RBP13.26□□□□□ -0.29
LITAF-216ENST00000574848 COL13A1Q5TAT6 717 aaPredicted RBP13.26□□□□□ -0.29
LITAF-216ENST00000574848 ANGEL2Q5VTE6 544 aaKnown RBP13.26□□□□□ -0.29
LITAF-216ENST00000574848 CYP4F22Q6NT55 531 aa13.26□□□□□ -0.29
LITAF-216ENST00000574848 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
LITAF-216ENST00000574848 VGLL2Q8N8G2 317 aa13.26□□□□□ -0.29
LITAF-216ENST00000574848 ARHGAP45Q92619 1136 aa13.26□□□□□ -0.29
LITAF-216ENST00000574848 ZBED3Q96IU2 234 aaPredicted RBP13.26□□□□□ -0.29
LITAF-216ENST00000574848 MXD3Q9BW11 206 aa13.26□□□□□ -0.29
LITAF-216ENST00000574848 API5Q9BZZ5 524 aaKnown RBP13.26□□□□□ -0.29
LITAF-216ENST00000574848 FAM205AQ6ZU69 1335 aa13.25□□□□□ -0.29
LITAF-216ENST00000574848 WNT10BO00744 389 aa13.25□□□□□ -0.29
LITAF-216ENST00000574848 MAP2K2P36507 400 aa13.25□□□□□ -0.29
LITAF-216ENST00000574848 GTF2IP78347 998 aa13.25□□□□□ -0.29
LITAF-216ENST00000574848 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
LITAF-216ENST00000574848 CERS5Q8N5B7 392 aa13.25□□□□□ -0.29
LITAF-216ENST00000574848 CDCA5Q96FF9 252 aa13.25□□□□□ -0.29
LITAF-216ENST00000574848 PUS3Q9BZE2 481 aaKnown RBP13.25□□□□□ -0.29
LITAF-216ENST00000574848 ZNF408Q9H9D4 720 aa13.25□□□□□ -0.29
LITAF-216ENST00000574848 GBA2Q9HCG7 927 aaPredicted RBP13.25□□□□□ -0.29
LITAF-216ENST00000574848 NOB1Q9ULX3 412 aaKnown RBP13.25□□□□□ -0.29
LITAF-216ENST00000574848 RFX5P48382 616 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms