RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 CEP57Q86XR8 500 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 STK24Q9Y6E0 443 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 C9orf84Q5VXU9 1444 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 E7EVH7 732 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 HMGB3O15347 200 aaKnown RBP11.31□□□□□ -0.6
USP6-205ENST00000574788 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 CCDC114Q96M63 670 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 ZNF853P0CG23 659 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 NEDD9Q14511 834 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 CCDC152Q4G0S7 254 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 TNPO1Q92973 898 aaKnown RBP11.31□□□□□ -0.6
USP6-205ENST00000574788 FAM135AQ9P2D6 1515 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 CETN3O15182 167 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 ATP2A3Q93084 1043 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 LMNTD2Q8IXW0 634 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 HAUS8Q9BT25 410 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 ORC3Q9UBD5 711 aaPredicted RBP11.3□□□□□ -0.6
USP6-205ENST00000574788 TMPOP42166 694 aaKnown RBP11.3□□□□□ -0.6
USP6-205ENST00000574788 VWA3BQ502W6 1294 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 ANKRD24Q8TF21 1146 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 AK9Q5TCS8 1911 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 BIRC2Q13490 618 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 MAP3K21Q5TCX8 1036 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 SEL1L2Q5TEA6 688 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 CCDC62Q6P9F0 684 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 GNAT2P19087 354 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 TSNAXIP1Q2TAA8 658 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 SEC62Q99442 399 aaKnown RBP11.3□□□□□ -0.6
USP6-205ENST00000574788 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
USP6-205ENST00000574788 CAPN2P17655 700 aa11.3□□□□□ -0.6
USP6-205ENST00000574788 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
USP6-205ENST00000574788 CCDC85AQ96PX6 553 aaPredicted RBP11.3□□□□□ -0.6
USP6-205ENST00000574788 KIAA1107Q9UPP5 1409 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 TUBB2AQ13885 445 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 LGSNQ5TDP6 509 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 NUTM1Q86Y26 1132 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 TUBB2BQ9BVA1 445 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 ECHDC1Q9NTX5 307 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 RASSF2P50749 326 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 NAP1L4Q99733 375 aaKnown RBP11.29□□□□□ -0.6
USP6-205ENST00000574788 CASKIN1Q8WXD9 1431 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 ZBTB43O43298 467 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 PTCD1O75127 700 aaKnown RBP11.29□□□□□ -0.6
USP6-205ENST00000574788 SMTNP53814 917 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 ERCC5P28715 1186 aaPredicted RBP11.29□□□□□ -0.6
USP6-205ENST00000574788 ITIH3Q06033 890 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 TMEM57Q8N5G2 664 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 NEK1Q96PY6 1258 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 SLC26A6Q9BXS9 759 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 NCOA2Q15596 1464 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 RRAGBQ5VZM2 374 aa11.29□□□□□ -0.6
USP6-205ENST00000574788 CCT2P78371 535 aaKnown RBP11.29□□□□□ -0.6
USP6-205ENST00000574788 C16orf71Q8IYS4 520 aaPredicted RBP11.29□□□□□ -0.6
USP6-205ENST00000574788 HSPA1LP34931 641 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 RTN1Q16799 776 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 TTC31Q49AM3 519 aaPredicted RBP11.28□□□□□ -0.6
USP6-205ENST00000574788 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
USP6-205ENST00000574788 WDR44Q5JSH3 913 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 NOX5Q96PH1 765 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 AGTPBP1Q9UPW5 1226 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 BIN1O00499 593 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 GBP6Q6ZN66 633 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 UBL4BQ8N7F7 174 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 GLT8D2Q9H1C3 349 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 RSPH14Q9UHP6 348 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 CNGA4Q8IV77 575 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 NSMCE1Q8WV22 266 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 GOLGA6CA6NDK9 693 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 GOLGA6BA6NDN3 693 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 GOLGA6DP0CG33 693 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 GJB2P29033 226 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 SMARCC2Q8TAQ2 1214 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 FAM76AQ8TAV0 307 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 SELENOSQ9BQE4 189 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 GOLGA6AQ9NYA3 693 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 AKNAQ7Z591 1439 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 CCT6AP40227 531 aaKnown RBP11.28□□□□□ -0.6
USP6-205ENST00000574788 ASIC1P78348 528 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 TTC16Q8NEE8 873 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 SLC12A5Q9H2X9 1139 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 RFC1P35251 1148 aaPredicted RBP11.28□□□□□ -0.6
USP6-205ENST00000574788 GUCY1B3Q02153 619 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 LDHAL6AQ6ZMR3 332 aa11.28□□□□□ -0.6
USP6-205ENST00000574788 MYD88Q99836 296 aa11.27□□□□□ -0.6
USP6-205ENST00000574788 MMRN2Q9H8L6 949 aa11.27□□□□□ -0.6
USP6-205ENST00000574788 RABGAP1Q9Y3P9 1069 aa11.27□□□□□ -0.6
USP6-205ENST00000574788 RFC4P35249 363 aa11.27□□□□□ -0.6
USP6-205ENST00000574788 MCM10Q7L590 875 aa11.27□□□□□ -0.6
USP6-205ENST00000574788 UTP11Q9Y3A2 253 aaKnown RBP11.27□□□□□ -0.6
USP6-205ENST00000574788 HDXQ7Z353 690 aa11.27□□□□□ -0.61
USP6-205ENST00000574788 FAM204AQ9H8W3 233 aa11.27□□□□□ -0.61
USP6-205ENST00000574788 KMT5BQ4FZB7 885 aa11.27□□□□□ -0.61
USP6-205ENST00000574788 NBPF11Q86T75 865 aa11.27□□□□□ -0.61
USP6-205ENST00000574788 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms