RNA–Protein interactions for RNA: ENST00000574494.1

TRAP1-210, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-210ENST00000574494 CRY2Q49AN0 593 aa16.91■□□□□ 0.3
TRAP1-210ENST00000574494 SNRKQ9NRH2 765 aa16.91■□□□□ 0.3
TRAP1-210ENST00000574494 DUOX1Q9NRD9 1551 aa16.9■□□□□ 0.3
TRAP1-210ENST00000574494 FKBP4Q02790 459 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRAP1-210ENST00000574494 NMIQ13287 307 aaPredicted RBP16.9■□□□□ 0.3
TRAP1-210ENST00000574494 CAVIN4Q5BKX8 364 aa16.9■□□□□ 0.3
TRAP1-210ENST00000574494 CCDC102BQ68D86 513 aa16.9■□□□□ 0.3
TRAP1-210ENST00000574494 HELBQ8NG08 1087 aaPredicted RBP16.9■□□□□ 0.3
TRAP1-210ENST00000574494 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
TRAP1-210ENST00000574494 COL4A1P02462 1669 aa16.9■□□□□ 0.3
TRAP1-210ENST00000574494 BRIP1Q9BX63 1249 aa16.89■□□□□ 0.29
TRAP1-210ENST00000574494 HELLSQ9NRZ9 838 aa16.89■□□□□ 0.29
TRAP1-210ENST00000574494 MINPP1Q9UNW1 487 aa16.89■□□□□ 0.29
TRAP1-210ENST00000574494 CCDC171Q6TFL3 1326 aa16.89■□□□□ 0.29
TRAP1-210ENST00000574494 MAST2Q6P0Q8 1798 aa16.89■□□□□ 0.29
TRAP1-210ENST00000574494 COL11A2P13942 1736 aaPredicted RBP16.88■□□□□ 0.29
TRAP1-210ENST00000574494 ST18O60284 1047 aa16.88■□□□□ 0.29
TRAP1-210ENST00000574494 TAF5LO75529 589 aa16.88■□□□□ 0.29
TRAP1-210ENST00000574494 MMP10P09238 476 aa16.88■□□□□ 0.29
TRAP1-210ENST00000574494 PDE6BP35913 854 aa16.88■□□□□ 0.29
TRAP1-210ENST00000574494 VPS37DQ86XT2 251 aa16.88■□□□□ 0.29
TRAP1-210ENST00000574494 SNX21Q969T3 373 aa16.88■□□□□ 0.29
TRAP1-210ENST00000574494 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
TRAP1-210ENST00000574494 SEMA3EO15041 775 aa16.87■□□□□ 0.29
TRAP1-210ENST00000574494 RNF113AO15541 343 aaKnown RBP16.87■□□□□ 0.29
TRAP1-210ENST00000574494 HOXA10P31260 410 aaPredicted RBP16.87■□□□□ 0.29
TRAP1-210ENST00000574494 PHKA1P46020 1223 aa16.87■□□□□ 0.29
TRAP1-210ENST00000574494 MCMDC2Q4G0Z9 681 aa16.87■□□□□ 0.29
TRAP1-210ENST00000574494 RNF20Q5VTR2 975 aa16.87■□□□□ 0.29
TRAP1-210ENST00000574494 CCDC24Q8N4L8 307 aa16.87■□□□□ 0.29
TRAP1-210ENST00000574494 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
TRAP1-210ENST00000574494 LSG1Q9H089 658 aaKnown RBP16.87■□□□□ 0.29
TRAP1-210ENST00000574494 XDHP47989 1333 aa16.87■□□□□ 0.29
TRAP1-210ENST00000574494 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
TRAP1-210ENST00000574494 KLRG2A4D1S0 409 aaPredicted RBP16.86■□□□□ 0.29
TRAP1-210ENST00000574494 BBOX1O75936 387 aa16.86■□□□□ 0.29
TRAP1-210ENST00000574494 HSPA4P34932 840 aa16.86■□□□□ 0.29
TRAP1-210ENST00000574494 MCAMP43121 646 aa16.86■□□□□ 0.29
TRAP1-210ENST00000574494 ZAP70P43403 619 aa16.86■□□□□ 0.29
TRAP1-210ENST00000574494 FAM227BQ96M60 508 aa16.86■□□□□ 0.29
TRAP1-210ENST00000574494 ANO8Q9HCE9 1232 aaPredicted RBP16.86■□□□□ 0.29
TRAP1-210ENST00000574494 LEMD3Q9Y2U8 911 aa16.86■□□□□ 0.29
TRAP1-210ENST00000574494 ZNF804BA4D1E1 1349 aa16.86■□□□□ 0.29
TRAP1-210ENST00000574494 PDS5AQ29RF7 1337 aaKnown RBP16.86■□□□□ 0.29
TRAP1-210ENST00000574494 CACNA1SQ13698 1873 aa16.85■□□□□ 0.29
TRAP1-210ENST00000574494 CCDC88AQ3V6T2 1871 aa16.85■□□□□ 0.29
TRAP1-210ENST00000574494 ZBTB22O15209 634 aa16.85■□□□□ 0.29
TRAP1-210ENST00000574494 ZKSCAN1P17029 563 aaPredicted RBP16.85■□□□□ 0.29
TRAP1-210ENST00000574494 ZMYM1Q5SVZ6 1142 aa16.85■□□□□ 0.29
TRAP1-210ENST00000574494 SPATA5Q8NB90 893 aa16.85■□□□□ 0.29
TRAP1-210ENST00000574494 IL17RAQ96F46 866 aa16.85■□□□□ 0.29
TRAP1-210ENST00000574494 TMX4Q9H1E5 349 aaPredicted RBP16.85■□□□□ 0.29
TRAP1-210ENST00000574494 HMG20BQ9P0W2 317 aa16.85■□□□□ 0.29
TRAP1-210ENST00000574494 MYO5AQ9Y4I1 1855 aaKnown RBP16.84■□□□□ 0.29
TRAP1-210ENST00000574494 IGSF3O75054 1194 aa16.84■□□□□ 0.29
TRAP1-210ENST00000574494 NPR1P16066 1061 aa16.84■□□□□ 0.29
TRAP1-210ENST00000574494 MCM2P49736 904 aa16.84■□□□□ 0.29
TRAP1-210ENST00000574494 MAP3K12Q12852 859 aa16.84■□□□□ 0.29
TRAP1-210ENST00000574494 SLC16A10Q8TF71 515 aa16.84■□□□□ 0.29
TRAP1-210ENST00000574494 APPBP2Q92624 585 aa16.84■□□□□ 0.29
TRAP1-210ENST00000574494 ANKIB1Q9P2G1 1089 aa16.84■□□□□ 0.29
TRAP1-210ENST00000574494 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
TRAP1-210ENST00000574494 NDUFB9Q9Y6M9 179 aa16.84■□□□□ 0.29
TRAP1-210ENST00000574494 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
TRAP1-210ENST00000574494 ALDH1B1P30837 517 aa16.83■□□□□ 0.28
TRAP1-210ENST00000574494 RASGRF1Q13972 1273 aa16.83■□□□□ 0.28
TRAP1-210ENST00000574494 SCARF1Q14162 830 aa16.83■□□□□ 0.28
TRAP1-210ENST00000574494 WASHC4Q2M389 1173 aa16.83■□□□□ 0.28
TRAP1-210ENST00000574494 TMED8Q6PL24 325 aaPredicted RBP16.83■□□□□ 0.28
TRAP1-210ENST00000574494 KIF2CQ99661 725 aa16.83■□□□□ 0.28
TRAP1-210ENST00000574494 DLEC1Q9Y238 1755 aa16.83■□□□□ 0.28
TRAP1-210ENST00000574494 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
TRAP1-210ENST00000574494 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
TRAP1-210ENST00000574494 ATP2B4P23634 1241 aa16.82■□□□□ 0.28
TRAP1-210ENST00000574494 TBC1D2Q9BYX2 928 aa16.82■□□□□ 0.28
TRAP1-210ENST00000574494 IL25Q9H293 177 aa16.82■□□□□ 0.28
TRAP1-210ENST00000574494 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
TRAP1-210ENST00000574494 FRAT2O75474 233 aaPredicted RBP16.81■□□□□ 0.28
TRAP1-210ENST00000574494 IDH1O75874 414 aaKnown RBP16.81■□□□□ 0.28
TRAP1-210ENST00000574494 CYP2E1P05181 493 aaPredicted RBP16.81■□□□□ 0.28
TRAP1-210ENST00000574494 KRT32Q14532 448 aa16.81■□□□□ 0.28
TRAP1-210ENST00000574494 UBE3CQ15386 1083 aa16.81■□□□□ 0.28
TRAP1-210ENST00000574494 MSL1Q68DK7 614 aa16.81■□□□□ 0.28
TRAP1-210ENST00000574494 ZNF804AQ7Z570 1209 aa16.81■□□□□ 0.28
TRAP1-210ENST00000574494 MAP4K1Q92918 833 aa16.81■□□□□ 0.28
TRAP1-210ENST00000574494 MASTLQ96GX5 879 aa16.81■□□□□ 0.28
TRAP1-210ENST00000574494 DSCC1Q9BVC3 393 aa16.81■□□□□ 0.28
TRAP1-210ENST00000574494 ANTXR1Q9H6X2 564 aa16.81■□□□□ 0.28
TRAP1-210ENST00000574494 RBM8AQ9Y5S9 174 aaKnown RBP16.81■□□□□ 0.28
TRAP1-210ENST00000574494 LAMA4Q16363 1823 aa16.81■□□□□ 0.28
TRAP1-210ENST00000574494 MAST3O60307 1309 aa16.8■□□□□ 0.28
TRAP1-210ENST00000574494 K7ELQ4 463 aaPredicted RBP16.8■□□□□ 0.28
TRAP1-210ENST00000574494 HIBADHP31937 336 aaKnown RBP16.8■□□□□ 0.28
TRAP1-210ENST00000574494 BCAMP50895 628 aa16.8■□□□□ 0.28
TRAP1-210ENST00000574494 C15orf52Q6ZUT6 534 aaKnown RBP16.8■□□□□ 0.28
TRAP1-210ENST00000574494 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
TRAP1-210ENST00000574494 ZGPATQ8N5A5 531 aaKnown RBP16.8■□□□□ 0.28
TRAP1-210ENST00000574494 GGA1Q9UJY5 639 aa16.8■□□□□ 0.28
TRAP1-210ENST00000574494 SRGNP10124 158 aa16.79■□□□□ 0.28
TRAP1-210ENST00000574494 PSMA5P28066 241 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms