RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 OSGEPQ9NPF4 335 aa6.34□□□□□ -1.39
TVP23B-205ENST00000572845 ZNF777Q9ULD5 760 aaPredicted RBP6.34□□□□□ -1.39
TVP23B-205ENST00000572845 HIF3AQ9Y2N7 669 aa6.34□□□□□ -1.39
TVP23B-205ENST00000572845 TNFRSF10BO14763 440 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 YBX3P16989 372 aaKnown RBP eCLIP6.33□□□□□ -1.4
TVP23B-205ENST00000572845 PIP4K2BP78356 416 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 FAM69CQ0P6D2 419 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 COL13A1Q5TAT6 717 aaPredicted RBP6.33□□□□□ -1.4
TVP23B-205ENST00000572845 KIAA1211Q6ZU35 1233 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 TRIM42Q8IWZ5 723 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 CEP120Q8N960 986 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 GIMAP7Q8NHV1 300 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 GPR152Q8TDT2 470 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 C7orf69Q9H7B7 122 aa6.33□□□□□ -1.4
TVP23B-205ENST00000572845 WISP1O95388 367 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 MED26O95402 600 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 WNT11O96014 354 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 PCSK2P16519 638 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 TAL1P17542 331 aaPredicted RBP6.32□□□□□ -1.4
TVP23B-205ENST00000572845 ARL4DP49703 201 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 TXNDC11Q6PKC3 985 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 FAM20CQ8IXL6 584 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 PMEPA1Q969W9 287 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 RNF208Q9H0X6 261 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 KCNK4Q9NYG8 393 aa6.32□□□□□ -1.4
TVP23B-205ENST00000572845 OAS3Q9Y6K5 1087 aaKnown RBP6.32□□□□□ -1.4
TVP23B-205ENST00000572845 HMX2A2RU54 273 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 H3BRJ5 948 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 TM4SF5O14894 197 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 EIF4EBP3O60516 100 aaPredicted RBP6.31□□□□□ -1.4
TVP23B-205ENST00000572845 ATG7O95352 703 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 SPINK2P20155 84 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 NAA30Q147X3 362 aaPredicted RBP6.31□□□□□ -1.4
TVP23B-205ENST00000572845 DTX1Q86Y01 620 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 TTC16Q8NEE8 873 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 KLHDC7BQ96G42 594 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 POP1Q99575 1024 aaKnown RBP6.31□□□□□ -1.4
TVP23B-205ENST00000572845 ELP3Q9H9T3 547 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 ZMIZ1Q9ULJ6 1067 aa6.31□□□□□ -1.4
TVP23B-205ENST00000572845 EPHA1P21709 976 aa6.3□□□□□ -1.4
TVP23B-205ENST00000572845 CDC25BP30305 580 aa6.3□□□□□ -1.4
TVP23B-205ENST00000572845 FAM26DQ5JW98 314 aa6.3□□□□□ -1.4
TVP23B-205ENST00000572845 XKR5Q6UX68 686 aa6.3□□□□□ -1.4
TVP23B-205ENST00000572845 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.3□□□□□ -1.4
TVP23B-205ENST00000572845 ZNF438Q7Z4V0 828 aa6.3□□□□□ -1.4
TVP23B-205ENST00000572845 CLP1Q92989 425 aaKnown RBP6.3□□□□□ -1.4
TVP23B-205ENST00000572845 MKNK1Q9BUB5 465 aa6.3□□□□□ -1.4
TVP23B-205ENST00000572845 CARD10Q9BWT7 1032 aa6.3□□□□□ -1.4
TVP23B-205ENST00000572845 KCNF1Q9H3M0 494 aa6.3□□□□□ -1.4
TVP23B-205ENST00000572845 SH2B1Q9NRF2 756 aaPredicted RBP6.3□□□□□ -1.4
TVP23B-205ENST00000572845 MEGF11A6BM72 1044 aa6.29□□□□□ -1.4
TVP23B-205ENST00000572845 PRR19A6NJB7 356 aa6.29□□□□□ -1.4
TVP23B-205ENST00000572845 BMP3P12645 472 aa6.29□□□□□ -1.4
TVP23B-205ENST00000572845 FDX2Q6P4F2 183 aa6.29□□□□□ -1.4
TVP23B-205ENST00000572845 BEND4Q6ZU67 534 aa6.29□□□□□ -1.4
TVP23B-205ENST00000572845 SALL4Q9UJQ4 1053 aa6.29□□□□□ -1.4
TVP23B-205ENST00000572845 CES1P23141 567 aa6.28□□□□□ -1.4
TVP23B-205ENST00000572845 CPSF6Q16630 551 aaKnown RBP eCLIP6.28□□□□□ -1.4
TVP23B-205ENST00000572845 SHKBP1Q8TBC3 707 aa6.28□□□□□ -1.4
TVP23B-205ENST00000572845 STK32AQ8WU08 396 aa6.28□□□□□ -1.4
TVP23B-205ENST00000572845 FOXD4L4Q8WXT5 416 aaPredicted RBP6.28□□□□□ -1.4
TVP23B-205ENST00000572845 RUSC1Q9BVN2 902 aa6.28□□□□□ -1.4
TVP23B-205ENST00000572845 RNF114Q9Y508 228 aa6.28□□□□□ -1.4
TVP23B-205ENST00000572845 ZBTB39O15060 712 aa6.27□□□□□ -1.41
TVP23B-205ENST00000572845 DDX3YO15523 660 aaKnown RBP6.27□□□□□ -1.41
TVP23B-205ENST00000572845 GAS2O43903 313 aaKnown RBP6.27□□□□□ -1.41
TVP23B-205ENST00000572845 ADAM11O75078 769 aa6.27□□□□□ -1.41
TVP23B-205ENST00000572845 CYP2E1P05181 493 aaPredicted RBP6.27□□□□□ -1.41
TVP23B-205ENST00000572845 SRPK2P78362 688 aaKnown RBP6.27□□□□□ -1.41
TVP23B-205ENST00000572845 UBASH3BQ8TF42 649 aa6.27□□□□□ -1.41
TVP23B-205ENST00000572845 NUDT16Q96DE0 195 aaKnown RBP6.27□□□□□ -1.41
TVP23B-205ENST00000572845 PDE2AO00408 941 aaPredicted RBP6.26□□□□□ -1.41
TVP23B-205ENST00000572845 C19orf57Q0VDD7 668 aa6.26□□□□□ -1.41
TVP23B-205ENST00000572845 CAPN12Q6ZSI9 719 aa6.26□□□□□ -1.41
TVP23B-205ENST00000572845 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
TVP23B-205ENST00000572845 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
TVP23B-205ENST00000572845 ZMYND15Q9H091 742 aa6.26□□□□□ -1.41
TVP23B-205ENST00000572845 ATG3Q9NT62 314 aa6.26□□□□□ -1.41
TVP23B-205ENST00000572845 DZANK1Q9NVP4 752 aa6.26□□□□□ -1.41
TVP23B-205ENST00000572845 TMEM63CQ9P1W3 806 aa6.26□□□□□ -1.41
TVP23B-205ENST00000572845 PIM2Q9P1W9 311 aa6.26□□□□□ -1.41
TVP23B-205ENST00000572845 WDR64B1ANS9 1081 aa6.25□□□□□ -1.41
TVP23B-205ENST00000572845 PREPP48147 710 aa6.25□□□□□ -1.41
TVP23B-205ENST00000572845 TMEM164Q5U3C3 297 aa6.25□□□□□ -1.41
TVP23B-205ENST00000572845 NUTM2GQ5VZR2 741 aa6.25□□□□□ -1.41
TVP23B-205ENST00000572845 TMEM102Q8N9M5 508 aaPredicted RBP6.25□□□□□ -1.41
TVP23B-205ENST00000572845 CYP4F12Q9HCS2 524 aa6.25□□□□□ -1.41
TVP23B-205ENST00000572845 CNTN3Q9P232 1028 aa6.25□□□□□ -1.41
TVP23B-205ENST00000572845 NFKBIEO00221 500 aa6.24□□□□□ -1.41
TVP23B-205ENST00000572845 MAP4P27816 1152 aaKnown RBP6.24□□□□□ -1.41
TVP23B-205ENST00000572845 NLRP12P59046 1061 aa6.24□□□□□ -1.41
TVP23B-205ENST00000572845 ALKBH2Q6NS38 261 aa6.24□□□□□ -1.41
TVP23B-205ENST00000572845 ADAMTSL4Q6UY14 1074 aa6.24□□□□□ -1.41
TVP23B-205ENST00000572845 SLC7A3Q8WY07 619 aa6.24□□□□□ -1.41
TVP23B-205ENST00000572845 BSNDQ8WZ55 320 aa6.24□□□□□ -1.41
TVP23B-205ENST00000572845 SUGCTQ9HAC7 445 aa6.24□□□□□ -1.41
TVP23B-205ENST00000572845 KANSL3Q9P2N6 904 aa6.24□□□□□ -1.41
TVP23B-205ENST00000572845 LEMD3Q9Y2U8 911 aa6.24□□□□□ -1.41
TVP23B-205ENST00000572845 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms