RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 NUP98P52948 1817 aa10.61□□□□□ -0.71
TVP23A-205ENST00000572428 PRAMEF22A3QJZ6 481 aa10.6□□□□□ -0.71
TVP23A-205ENST00000572428 PRIM1P49642 420 aaKnown RBP10.6□□□□□ -0.71
TVP23A-205ENST00000572428 INTS3Q68E01 1043 aaKnown RBP10.6□□□□□ -0.71
TVP23A-205ENST00000572428 AMOTL1Q8IY63 956 aa10.6□□□□□ -0.71
TVP23A-205ENST00000572428 TNPO1Q92973 898 aaKnown RBP10.6□□□□□ -0.71
TVP23A-205ENST00000572428 STK31Q9BXU1 1019 aa10.6□□□□□ -0.71
TVP23A-205ENST00000572428 DDX21Q9NR30 783 aaKnown RBP eCLIP10.6□□□□□ -0.71
TVP23A-205ENST00000572428 MKRN1Q9UHC7 482 aaKnown RBP10.6□□□□□ -0.71
TVP23A-205ENST00000572428 CAND2O75155 1236 aa10.6□□□□□ -0.71
TVP23A-205ENST00000572428 C11orf91Q3C1V1 193 aa10.6□□□□□ -0.71
TVP23A-205ENST00000572428 ASAP1Q9ULH1 1129 aa10.6□□□□□ -0.71
TVP23A-205ENST00000572428 LRCH2Q5VUJ6 765 aa10.6□□□□□ -0.71
TVP23A-205ENST00000572428 MTERF4Q7Z6M4 381 aaKnown RBP10.6□□□□□ -0.71
TVP23A-205ENST00000572428 HYPKQ9NX55 129 aa10.6□□□□□ -0.71
TVP23A-205ENST00000572428 FBXO9Q9UK97 447 aaPredicted RBP10.6□□□□□ -0.71
TVP23A-205ENST00000572428 PCDHB15Q9Y5E8 787 aa10.6□□□□□ -0.71
TVP23A-205ENST00000572428 RFX1P22670 979 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 CCDC15Q0P6D6 951 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 C1orf131Q8NDD1 294 aaKnown RBP10.59□□□□□ -0.71
TVP23A-205ENST00000572428 RBM46Q8TBY0 533 aaKnown RBP10.59□□□□□ -0.71
TVP23A-205ENST00000572428 ENOX1Q8TC92 643 aaKnown RBP10.59□□□□□ -0.71
TVP23A-205ENST00000572428 TAF4BQ92750 862 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 ZNF396Q96N95 335 aaPredicted RBP10.59□□□□□ -0.71
TVP23A-205ENST00000572428 NUCKS1Q9H1E3 243 aaKnown RBP10.59□□□□□ -0.71
TVP23A-205ENST00000572428 G3BP2Q9UN86 482 aaKnown RBP10.59□□□□□ -0.71
TVP23A-205ENST00000572428 TNNQ9UQP3 1299 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 SYNRGQ9UMZ2 1314 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 PPP1R12AO14974 1030 aaPredicted RBP10.59□□□□□ -0.71
TVP23A-205ENST00000572428 FLIIQ13045 1269 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 CCDC70Q6NSX1 233 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 G2E3Q7L622 706 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 SMARCC1Q92922 1105 aaPredicted RBP10.59□□□□□ -0.71
TVP23A-205ENST00000572428 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 SLC4A9Q96Q91 983 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 CHPF2Q9P2E5 772 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 USP16Q9Y5T5 823 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 TPM3P06753 285 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 GTF2A1P52655 376 aaPredicted RBP10.59□□□□□ -0.71
TVP23A-205ENST00000572428 MECOMQ03112 1051 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 CDC37L1Q7L3B6 337 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 JMYQ8N9B5 988 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 SUN2Q9UH99 717 aa10.59□□□□□ -0.71
TVP23A-205ENST00000572428 QSER1Q2KHR3 1735 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 SCN7AQ01118 1682 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 FAN1Q9Y2M0 1017 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 UBR3Q6ZT12 1888 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 ADCY9O60503 1353 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 C4BP0C0L5 1744 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 C8orf34Q49A92 452 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 OGFOD1Q8N543 542 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 DRC1Q96MC2 740 aa10.58□□□□□ -0.72
TVP23A-205ENST00000572428 DUSP9Q99956 384 aaKnown RBP10.58□□□□□ -0.72
TVP23A-205ENST00000572428 ITPRIPQ8IWB1 547 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 PALLDQ8WX93 1383 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 C4AP0C0L4 1744 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 IPO5O00410 1097 aaKnown RBP10.57□□□□□ -0.72
TVP23A-205ENST00000572428 ABL2P42684 1182 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 TAGLNQ01995 201 aaKnown RBP10.57□□□□□ -0.72
TVP23A-205ENST00000572428 TMEM57Q8N5G2 664 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 SEZ6LQ9BYH1 1024 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
TVP23A-205ENST00000572428 COMMD10Q9Y6G5 202 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 ICE2Q659A1 982 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 FAM196AQ6ZSG2 479 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 KRT27Q7Z3Y8 459 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 HSCBQ8IWL3 235 aa10.57□□□□□ -0.72
TVP23A-205ENST00000572428 ZBTB7BO15156 539 aaPredicted RBP10.56□□□□□ -0.72
TVP23A-205ENST00000572428 KCNQ2O43526 872 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 KIF1CO43896 1103 aaKnown RBP10.56□□□□□ -0.72
TVP23A-205ENST00000572428 RXRBP28702 533 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 COPB2P35606 906 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 PROSER3Q2NL68 480 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 PHAXQ9H814 394 aaKnown RBP10.56□□□□□ -0.72
TVP23A-205ENST00000572428 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 BIN2Q9UBW5 565 aaPredicted RBP10.56□□□□□ -0.72
TVP23A-205ENST00000572428 ISY1Q9ULR0 285 aaKnown RBP10.56□□□□□ -0.72
TVP23A-205ENST00000572428 SUFUQ9UMX1 484 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 NBPF26B4DH59 902 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 CYP19A1P11511 503 aaPredicted RBP10.56□□□□□ -0.72
TVP23A-205ENST00000572428 EIF2S2P20042 333 aaKnown RBP10.56□□□□□ -0.72
TVP23A-205ENST00000572428 MCM6Q14566 821 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 NBPF14Q5TI25 921 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 DZIP3Q86Y13 1208 aaKnown RBP10.56□□□□□ -0.72
TVP23A-205ENST00000572428 NBPF15Q8N660 670 aa10.56□□□□□ -0.72
TVP23A-205ENST00000572428 CWC25Q9NXE8 425 aaPredicted RBP10.56□□□□□ -0.72
TVP23A-205ENST00000572428 NOP2P46087 812 aaKnown RBP10.55□□□□□ -0.72
TVP23A-205ENST00000572428 PDE4DQ08499 809 aa10.55□□□□□ -0.72
TVP23A-205ENST00000572428 C4orf46Q504U0 113 aa10.55□□□□□ -0.72
TVP23A-205ENST00000572428 UHMK1Q8TAS1 419 aaKnown RBP10.55□□□□□ -0.72
TVP23A-205ENST00000572428 ACSBG1Q96GR2 724 aa10.55□□□□□ -0.72
TVP23A-205ENST00000572428 LAMB2P55268 1798 aa10.55□□□□□ -0.72
TVP23A-205ENST00000572428 CASZ1Q86V15 1759 aa10.55□□□□□ -0.72
TVP23A-205ENST00000572428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
TVP23A-205ENST00000572428 CCT4P50991 539 aaKnown RBP10.55□□□□□ -0.72
TVP23A-205ENST00000572428 TUBGCP6Q96RT7 1819 aa10.55□□□□□ -0.72
TVP23A-205ENST00000572428 POTEAQ6S8J7 498 aa10.55□□□□□ -0.72
TVP23A-205ENST00000572428 LOC102724428A0A0B4J2F2 783 aa10.54□□□□□ -0.72
TVP23A-205ENST00000572428 OATP04181 439 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms