RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 H7C1W4 665 aa15.74■□□□□ 0.11
CTDNEP1-205ENST00000570828 PSMD14O00487 310 aa15.74■□□□□ 0.11
CTDNEP1-205ENST00000570828 H7C1D1 291 aa15.73■□□□□ 0.11
CTDNEP1-205ENST00000570828 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
CTDNEP1-205ENST00000570828 TMEM106CQ9BVX2 250 aa15.73■□□□□ 0.11
CTDNEP1-205ENST00000570828 CNOT7Q9UIV1 285 aaKnown RBP15.73■□□□□ 0.11
CTDNEP1-205ENST00000570828 ZNF521Q96K83 1311 aa15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 ST18O60284 1047 aa15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 HSPA1AP0DMV8 641 aaKnown RBP15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 HSPA1BP0DMV9 641 aaKnown RBP15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 PLCG2P16885 1265 aa15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 ATP2B4P23634 1241 aa15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 RPS12P25398 132 aaKnown RBP15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 IGHMBP2P38935 993 aaKnown RBP15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 TRPM4Q8TD43 1214 aa15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 DPF2Q92785 391 aa15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 PLA2G12BQ9BX93 195 aa15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 BSDC1Q9NW68 430 aaPredicted RBP15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 ABT1Q9ULW3 272 aaKnown RBP15.72■□□□□ 0.11
CTDNEP1-205ENST00000570828 F6X3S4 739 aa15.71■□□□□ 0.11
CTDNEP1-205ENST00000570828 CASP7P55210 303 aa15.71■□□□□ 0.11
CTDNEP1-205ENST00000570828 FAM161AQ3B820 660 aa15.71■□□□□ 0.11
CTDNEP1-205ENST00000570828 ZC3H15Q8WU90 426 aaKnown RBP15.71■□□□□ 0.11
CTDNEP1-205ENST00000570828 FAM212AQ96EL1 285 aa15.71■□□□□ 0.11
CTDNEP1-205ENST00000570828 SHTN1A0MZ66 631 aa15.7■□□□□ 0.1
CTDNEP1-205ENST00000570828 TRAF5O00463 557 aa15.7■□□□□ 0.1
CTDNEP1-205ENST00000570828 ITGA6P23229 1130 aa15.7■□□□□ 0.1
CTDNEP1-205ENST00000570828 KCNQ5Q9NR82 932 aa15.7■□□□□ 0.1
CTDNEP1-205ENST00000570828 MINPP1Q9UNW1 487 aa15.7■□□□□ 0.1
CTDNEP1-205ENST00000570828 RASSF10A6NK89 507 aa15.69■□□□□ 0.1
CTDNEP1-205ENST00000570828 VEGFBP49765 207 aa15.69■□□□□ 0.1
CTDNEP1-205ENST00000570828 BEND3Q5T5X7 828 aa15.69■□□□□ 0.1
CTDNEP1-205ENST00000570828 IFFO2Q5TF58 517 aa15.69■□□□□ 0.1
CTDNEP1-205ENST00000570828 MPHOSPH8Q99549 860 aa15.69■□□□□ 0.1
CTDNEP1-205ENST00000570828 GLIS2Q9BZE0 524 aaPredicted RBP15.69■□□□□ 0.1
CTDNEP1-205ENST00000570828 MED23Q9ULK4 1368 aa15.69■□□□□ 0.1
CTDNEP1-205ENST00000570828 E9PSI1 815 aa15.68■□□□□ 0.1
CTDNEP1-205ENST00000570828 CSF1RP07333 972 aa15.68■□□□□ 0.1
CTDNEP1-205ENST00000570828 VIL1P09327 827 aaKnown RBP15.68■□□□□ 0.1
CTDNEP1-205ENST00000570828 HIRAP54198 1017 aaPredicted RBP15.68■□□□□ 0.1
CTDNEP1-205ENST00000570828 FMR1Q06787 632 aaKnown RBP eCLIP15.68■□□□□ 0.1
CTDNEP1-205ENST00000570828 DEFB115Q30KQ5 88 aa15.68■□□□□ 0.1
CTDNEP1-205ENST00000570828 TBC1D10BQ4KMP7 808 aaPredicted RBP15.68■□□□□ 0.1
CTDNEP1-205ENST00000570828 SAMD7Q7Z3H4 446 aa15.68■□□□□ 0.1
CTDNEP1-205ENST00000570828 PGAP2Q9UHJ9 254 aa15.68■□□□□ 0.1
CTDNEP1-205ENST00000570828 ANKRD18BA2A2Z9 1011 aa15.67■□□□□ 0.1
CTDNEP1-205ENST00000570828 CCT4P50991 539 aaKnown RBP15.67■□□□□ 0.1
CTDNEP1-205ENST00000570828 SLC4A10Q6U841 1118 aa15.67■□□□□ 0.1
CTDNEP1-205ENST00000570828 PAXIP1Q6ZW49 1069 aaPredicted RBP15.67■□□□□ 0.1
CTDNEP1-205ENST00000570828 CDC37L1Q7L3B6 337 aa15.67■□□□□ 0.1
CTDNEP1-205ENST00000570828 PODNQ7Z5L7 613 aa15.67■□□□□ 0.1
CTDNEP1-205ENST00000570828 ANKRD2Q9GZV1 360 aa15.67■□□□□ 0.1
CTDNEP1-205ENST00000570828 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
CTDNEP1-205ENST00000570828 GRM8O00222 908 aa15.66■□□□□ 0.1
CTDNEP1-205ENST00000570828 CELF2O95319 508 aaKnown RBP15.66■□□□□ 0.1
CTDNEP1-205ENST00000570828 IFIT5Q13325 482 aaKnown RBP15.66■□□□□ 0.1
CTDNEP1-205ENST00000570828 KIF4BQ2VIQ3 1234 aa15.66■□□□□ 0.1
CTDNEP1-205ENST00000570828 CST9Q5W186 159 aa15.66■□□□□ 0.1
CTDNEP1-205ENST00000570828 RSBN1LQ6PCB5 846 aaPredicted RBP15.66■□□□□ 0.1
CTDNEP1-205ENST00000570828 C9orf78Q9NZ63 289 aaPredicted RBP15.66■□□□□ 0.1
CTDNEP1-205ENST00000570828 LEMD3Q9Y2U8 911 aa15.66■□□□□ 0.1
CTDNEP1-205ENST00000570828 MYH3P11055 1940 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 USP17L3A6NCW0 530 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 USP17L4A6NCW7 530 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 ALDH1L1O75891 902 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 EGFRP00533 1210 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 KCNJ4P48050 445 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 RBM26Q5T8P6 1007 aaKnown RBP15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 USP17L1Q7RTZ2 530 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 AGBL3Q8NEM8 1001 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 AIDAQ96BJ3 306 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 SRCIN1Q9C0H9 1055 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 ZNF408Q9H9D4 720 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 TLL2Q9Y6L7 1015 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 ZNF609O15014 1411 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 CACNA1FO60840 1977 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 ZNF804BA4D1E1 1349 aa15.65■□□□□ 0.1
CTDNEP1-205ENST00000570828 WTIPA6NIX2 430 aaPredicted RBP15.64■□□□□ 0.09
CTDNEP1-205ENST00000570828 ECE1P42892 770 aa15.64■□□□□ 0.09
CTDNEP1-205ENST00000570828 FOXO4P98177 505 aa15.64■□□□□ 0.09
CTDNEP1-205ENST00000570828 COL13A1Q5TAT6 717 aaPredicted RBP15.64■□□□□ 0.09
CTDNEP1-205ENST00000570828 KRT26Q7Z3Y9 468 aa15.64■□□□□ 0.09
CTDNEP1-205ENST00000570828 DCPSQ96C86 337 aaKnown RBP15.64■□□□□ 0.09
CTDNEP1-205ENST00000570828 COA1Q9GZY4 146 aa15.64■□□□□ 0.09
CTDNEP1-205ENST00000570828 WDR33Q9C0J8 1336 aaKnown RBP15.64■□□□□ 0.09
CTDNEP1-205ENST00000570828 CCER2I3L3R5 266 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 IRX5P78411 483 aaPredicted RBP15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 CHRNDQ07001 517 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 GRM1Q13255 1194 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 CCDC57Q2TAC2 916 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 TAF7LQ5H9L4 462 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 LMBR1LQ6UX01 489 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 USP48Q86UV5 1035 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 FBXW7Q969H0 707 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 CAPNS2Q96L46 248 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 PTPRCP08575 1304 aa15.63■□□□□ 0.09
CTDNEP1-205ENST00000570828 USP17L8P0C7I0 530 aa15.62■□□□□ 0.09
CTDNEP1-205ENST00000570828 ZNF280AP59817 542 aaPredicted RBP15.62■□□□□ 0.09
CTDNEP1-205ENST00000570828 SLFN5Q08AF3 891 aa15.62■□□□□ 0.09
CTDNEP1-205ENST00000570828 SAPCD2Q86UD0 394 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms