RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 XAGE2Q96GT9 111 aa4.44□□□□□ -1.7
CNOT1-221ENST00000569924 MRFAP1L1Q96HT8 127 aa4.44□□□□□ -1.7
CNOT1-221ENST00000569924 NGLY1Q96IV0 654 aa4.44□□□□□ -1.7
CNOT1-221ENST00000569924 MTRQ99707 1265 aa4.44□□□□□ -1.7
CNOT1-221ENST00000569924 GGNBP2Q9H3C7 697 aa4.44□□□□□ -1.7
CNOT1-221ENST00000569924 C12orf49Q9H741 205 aa4.44□□□□□ -1.7
CNOT1-221ENST00000569924 ANKRD50Q9ULJ7 1429 aa4.44□□□□□ -1.7
CNOT1-221ENST00000569924 RIMS2Q9UQ26 1411 aa4.44□□□□□ -1.7
CNOT1-221ENST00000569924 DIP2AQ14689 1571 aa4.44□□□□□ -1.7
CNOT1-221ENST00000569924 COL16A1Q07092 1604 aaPredicted RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 PIK3R4Q99570 1358 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 GCC2Q8IWJ2 1684 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 K7ELQ4 463 aaPredicted RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 EML1O00423 815 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 LILRA1O75019 489 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 XRCC5P13010 732 aaKnown RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 NOS2P35228 1153 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 ST13P50502 369 aaKnown RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 DGKZQ13574 1117 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 C8orf34Q49A92 452 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 RNF187Q5TA31 235 aaPredicted RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 NYAP1Q6ZVC0 841 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 ZNF784Q8NCA9 323 aaPredicted RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 TTC16Q8NEE8 873 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 ZCRB1Q8TBF4 217 aaKnown RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 RASGRP4Q8TDF6 673 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 GPRASP2Q96D09 838 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 NUDT16Q96DE0 195 aaKnown RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 CDK15Q96Q40 435 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 OSBPL7Q9BZF2 842 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 DMGDHQ9UI17 866 aaKnown RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 NOP58Q9Y2X3 529 aaKnown RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 MRPL42Q9Y6G3 142 aaKnown RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 V9GY48 417 aaPredicted RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 MYO5BQ9ULV0 1848 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 UNC13BO14795 1591 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 SPATA31A6Q5VVP1 1343 aa4.43□□□□□ -1.7
CNOT1-221ENST00000569924 AHDC1Q5TGY3 1603 aaPredicted RBP4.43□□□□□ -1.7
CNOT1-221ENST00000569924 FAM205CA6NFA0 338 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 S1PR4O95977 384 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 GRM5P41594 1212 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 ANAPC15P60006 121 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 SERINC3Q13530 473 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 ADAMTS13Q76LX8 1427 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 ERMP1Q7Z2K6 904 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 TREML1Q86YW5 311 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 NBPF15Q8N660 670 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 GPR152Q8TDT2 470 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 ZNF516Q92618 1163 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 SEC16BQ96JE7 1060 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 C19orf44Q9H6X5 657 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 NEUROD4Q9HD90 331 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 FAM13BQ9NYF5 915 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 KLK14Q9P0G3 267 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 FAM8A1Q9UBU6 413 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 ZNF232Q9UNY5 417 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 HCN4Q9Y3Q4 1203 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 USP3Q9Y6I4 520 aa4.42□□□□□ -1.7
CNOT1-221ENST00000569924 SHPRHQ149N8 1683 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 ROCK1Q13464 1354 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.41□□□□□ -1.7
CNOT1-221ENST00000569924 DCCP43146 1447 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 ENPP3O14638 875 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 IL2RAP01589 272 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 ATF3P18847 181 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 ADD1P35611 737 aaKnown RBP4.41□□□□□ -1.7
CNOT1-221ENST00000569924 FAM50AQ14320 339 aaKnown RBP4.41□□□□□ -1.7
CNOT1-221ENST00000569924 ARID5BQ14865 1188 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 TLR1Q15399 786 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 TJAP1Q5JTD0 557 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 SH3PXD2AQ5TCZ1 1133 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 MEI1Q5TIA1 1274 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 ZNF772Q68DY9 489 aaPredicted RBP4.41□□□□□ -1.7
CNOT1-221ENST00000569924 NKX2-3Q8TAU0 364 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 ZDHHC1Q8WTX9 485 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 CNKSR1Q969H4 720 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 L3MBTL2Q969R5 705 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 CCDC74AQ96AQ1 378 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 ESYT1Q9BSJ8 1104 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 SRCIN1Q9C0H9 1055 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 IL21Q9HBE4 155 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 RAB6BQ9NRW1 208 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 SIRPGQ9P1W8 387 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 HRH3Q9Y5N1 445 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 LRP6O75581 1613 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 IQGAP3Q86VI3 1631 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 CDK12Q9NYV4 1490 aaPredicted RBP4.41□□□□□ -1.7
CNOT1-221ENST00000569924 E9PCH4 1651 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 TRPM2O94759 1503 aa4.41□□□□□ -1.7
CNOT1-221ENST00000569924 SETD1AO15047 1707 aaKnown RBP4.41□□□□□ -1.7
CNOT1-221ENST00000569924 ST18O60284 1047 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 SSBP05455 408 aaKnown RBP eCLIP4.4□□□□□ -1.71
CNOT1-221ENST00000569924 FSHRP23945 695 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 SKOR1P84550 965 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 NFX1Q12986 1120 aaKnown RBP4.4□□□□□ -1.71
CNOT1-221ENST00000569924 TRIM32Q13049 653 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 PPP1R26Q5T8A7 1209 aaPredicted RBP4.4□□□□□ -1.71
CNOT1-221ENST00000569924 MEX3CQ5U5Q3 659 aaKnown RBP4.4□□□□□ -1.71
CNOT1-221ENST00000569924 C1orf53Q5VUE5 145 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 238.6 ms