RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 DUOXA2Q1HG44 320 aa10.05□□□□□ -0.8
CHD9-220ENST00000569794 FAM117BQ6P1L5 589 aa10.05□□□□□ -0.8
CHD9-220ENST00000569794 SH2B1Q9NRF2 756 aaPredicted RBP10.05□□□□□ -0.8
CHD9-220ENST00000569794 DDX3YO15523 660 aaKnown RBP10.04□□□□□ -0.8
CHD9-220ENST00000569794 ADAM11O75078 769 aa10.04□□□□□ -0.8
CHD9-220ENST00000569794 TRIM42Q8IWZ5 723 aa10.04□□□□□ -0.8
CHD9-220ENST00000569794 FOXD4L4Q8WXT5 416 aaPredicted RBP10.04□□□□□ -0.8
CHD9-220ENST00000569794 MYRFLQ96LU7 910 aa10.04□□□□□ -0.8
CHD9-220ENST00000569794 PAX4O43316 350 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 PTPRAP18433 802 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 IRAK1P51617 712 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 TMEM164Q5U3C3 297 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 NCAPG2Q86XI2 1143 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 ABTB2Q8N961 1025 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 UBASH3BQ8TF42 649 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 POP1Q99575 1024 aaKnown RBP10.03□□□□□ -0.8
CHD9-220ENST00000569794 KRTAP9-9Q9BYP9 154 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 KRTAP9-4Q9BYQ2 154 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 ADAM19Q9H013 955 aa10.03□□□□□ -0.8
CHD9-220ENST00000569794 OAS3Q9Y6K5 1087 aaKnown RBP10.03□□□□□ -0.8
CHD9-220ENST00000569794 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.02□□□□□ -0.81
CHD9-220ENST00000569794 HMX2A2RU54 273 aa10.02□□□□□ -0.81
CHD9-220ENST00000569794 ATG7O95352 703 aa10.02□□□□□ -0.81
CHD9-220ENST00000569794 GP2P55259 537 aaKnown RBP10.02□□□□□ -0.81
CHD9-220ENST00000569794 RNF43Q68DV7 783 aa10.02□□□□□ -0.81
CHD9-220ENST00000569794 PDE12Q6L8Q7 609 aaKnown RBP10.02□□□□□ -0.81
CHD9-220ENST00000569794 KLHDC7BQ96G42 594 aa10.02□□□□□ -0.81
CHD9-220ENST00000569794 SEC31BQ9NQW1 1179 aa10.02□□□□□ -0.81
CHD9-220ENST00000569794 CLP1Q92989 425 aaKnown RBP10.01□□□□□ -0.81
CHD9-220ENST00000569794 DBNDD2Q9BQY9 259 aa10.01□□□□□ -0.81
CHD9-220ENST00000569794 ELP3Q9H9T3 547 aa10.01□□□□□ -0.81
CHD9-220ENST00000569794 TMEM63CQ9P1W3 806 aa10.01□□□□□ -0.81
CHD9-220ENST00000569794 BTBD11A6QL63 1104 aa10□□□□□ -0.81
CHD9-220ENST00000569794 ADAMTS4O75173 837 aa10□□□□□ -0.81
CHD9-220ENST00000569794 SPINK2P20155 84 aa10□□□□□ -0.81
CHD9-220ENST00000569794 INTS5Q6P9B9 1019 aaKnown RBP10□□□□□ -0.81
CHD9-220ENST00000569794 FAM20CQ8IXL6 584 aa10□□□□□ -0.81
CHD9-220ENST00000569794 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
CHD9-220ENST00000569794 PRR19A6NJB7 356 aa9.99□□□□□ -0.81
CHD9-220ENST00000569794 FAM177BA6PVY3 158 aa9.99□□□□□ -0.81
CHD9-220ENST00000569794 H3BRJ5 948 aa9.99□□□□□ -0.81
CHD9-220ENST00000569794 GRIK1P39086 918 aa9.99□□□□□ -0.81
CHD9-220ENST00000569794 PIP4K2BP78356 416 aa9.99□□□□□ -0.81
CHD9-220ENST00000569794 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.99□□□□□ -0.81
CHD9-220ENST00000569794 CLEC10AQ8IUN9 316 aa9.99□□□□□ -0.81
CHD9-220ENST00000569794 WNT8BQ93098 351 aa9.99□□□□□ -0.81
CHD9-220ENST00000569794 NUDT16Q96DE0 195 aaKnown RBP9.99□□□□□ -0.81
CHD9-220ENST00000569794 CNTN3Q9P232 1028 aa9.99□□□□□ -0.81
CHD9-220ENST00000569794 KANSL3Q9P2N6 904 aa9.99□□□□□ -0.81
CHD9-220ENST00000569794 ZNF438Q7Z4V0 828 aa9.98□□□□□ -0.81
CHD9-220ENST00000569794 FAM83CQ9BQN1 747 aa9.98□□□□□ -0.81
CHD9-220ENST00000569794 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.98□□□□□ -0.81
CHD9-220ENST00000569794 ANKRD34AQ69YU3 496 aa9.97□□□□□ -0.81
CHD9-220ENST00000569794 DTX1Q86Y01 620 aa9.97□□□□□ -0.81
CHD9-220ENST00000569794 ZMYND15Q9H091 742 aa9.97□□□□□ -0.81
CHD9-220ENST00000569794 OSGEPQ9NPF4 335 aa9.97□□□□□ -0.81
CHD9-220ENST00000569794 SLAIN2Q9P270 581 aa9.97□□□□□ -0.81
CHD9-220ENST00000569794 SALL4Q9UJQ4 1053 aa9.97□□□□□ -0.81
CHD9-220ENST00000569794 NFKBIEO00221 500 aa9.96□□□□□ -0.82
CHD9-220ENST00000569794 BMP3P12645 472 aa9.96□□□□□ -0.82
CHD9-220ENST00000569794 TAL1P17542 331 aaPredicted RBP9.96□□□□□ -0.82
CHD9-220ENST00000569794 TXKP42681 527 aa9.96□□□□□ -0.82
CHD9-220ENST00000569794 PREPP48147 710 aa9.96□□□□□ -0.82
CHD9-220ENST00000569794 CABP4P57796 275 aa9.96□□□□□ -0.82
CHD9-220ENST00000569794 ATCAYQ86WG3 371 aa9.96□□□□□ -0.82
CHD9-220ENST00000569794 SEPT3Q9UH03 358 aa9.96□□□□□ -0.82
CHD9-220ENST00000569794 SART1O43290 800 aaKnown RBP9.95□□□□□ -0.82
CHD9-220ENST00000569794 ACPPP15309 386 aa9.95□□□□□ -0.82
CHD9-220ENST00000569794 BEND4Q6ZU67 534 aa9.95□□□□□ -0.82
CHD9-220ENST00000569794 SHKBP1Q8TBC3 707 aa9.95□□□□□ -0.82
CHD9-220ENST00000569794 RNF208Q9H0X6 261 aa9.95□□□□□ -0.82
CHD9-220ENST00000569794 KCNF1Q9H3M0 494 aa9.95□□□□□ -0.82
CHD9-220ENST00000569794 NLRP12P59046 1061 aa9.94□□□□□ -0.82
CHD9-220ENST00000569794 XKR5Q6UX68 686 aa9.94□□□□□ -0.82
CHD9-220ENST00000569794 C1orf127Q8N9H9 656 aa9.94□□□□□ -0.82
CHD9-220ENST00000569794 DZANK1Q9NVP4 752 aa9.94□□□□□ -0.82
CHD9-220ENST00000569794 RPLP1P05386 114 aaKnown RBP9.93□□□□□ -0.82
CHD9-220ENST00000569794 CES1P23141 567 aa9.93□□□□□ -0.82
CHD9-220ENST00000569794 RUSC1Q9BVN2 902 aa9.93□□□□□ -0.82
CHD9-220ENST00000569794 HIF3AQ9Y2N7 669 aa9.93□□□□□ -0.82
CHD9-220ENST00000569794 PDE2AO00408 941 aaPredicted RBP9.92□□□□□ -0.82
CHD9-220ENST00000569794 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
CHD9-220ENST00000569794 HHIPQ96QV1 700 aa9.92□□□□□ -0.82
CHD9-220ENST00000569794 SOX13Q9UN79 622 aa9.92□□□□□ -0.82
CHD9-220ENST00000569794 TRPA1O75762 1119 aa9.91□□□□□ -0.82
CHD9-220ENST00000569794 FDX2Q6P4F2 183 aa9.91□□□□□ -0.82
CHD9-220ENST00000569794 SLC7A3Q8WY07 619 aa9.91□□□□□ -0.82
CHD9-220ENST00000569794 EDEM1Q92611 657 aa9.91□□□□□ -0.82
CHD9-220ENST00000569794 MEGF11A6BM72 1044 aa9.9□□□□□ -0.82
CHD9-220ENST00000569794 WNT11O96014 354 aa9.9□□□□□ -0.82
CHD9-220ENST00000569794 DNM1Q05193 864 aaKnown RBP9.9□□□□□ -0.82
CHD9-220ENST00000569794 CHRDQ9H2X0 955 aa9.9□□□□□ -0.82
CHD9-220ENST00000569794 GGNBP2Q9H3C7 697 aa9.9□□□□□ -0.82
CHD9-220ENST00000569794 C19orf57Q0VDD7 668 aa9.89□□□□□ -0.83
CHD9-220ENST00000569794 HGSNATQ68CP4 663 aa9.89□□□□□ -0.83
CHD9-220ENST00000569794 HELQQ8TDG4 1101 aa9.89□□□□□ -0.83
CHD9-220ENST00000569794 PBXIP1Q96AQ6 731 aa9.89□□□□□ -0.83
CHD9-220ENST00000569794 A6NHS1 94 aa9.88□□□□□ -0.83
CHD9-220ENST00000569794 WDR64B1ANS9 1081 aa9.88□□□□□ -0.83
CHD9-220ENST00000569794 PDGFAP04085 211 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms