RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 ZNF541Q9H0D2 1346 aa8.08□□□□□ -1.12
CDH13-212ENST00000569144 CA12O43570 354 aa8.08□□□□□ -1.12
CDH13-212ENST00000569144 LILRB3O75022 631 aa8.08□□□□□ -1.12
CDH13-212ENST00000569144 JUNDP17535 347 aa8.08□□□□□ -1.12
CDH13-212ENST00000569144 MMP16P51512 607 aa8.08□□□□□ -1.12
CDH13-212ENST00000569144 ANKLE1Q8NAG6 615 aa8.08□□□□□ -1.12
CDH13-212ENST00000569144 PCMTD1Q96MG8 357 aaPredicted RBP8.08□□□□□ -1.12
CDH13-212ENST00000569144 GPR101Q96P66 508 aaPredicted RBP8.08□□□□□ -1.12
CDH13-212ENST00000569144 DDX21Q9NR30 783 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDH13-212ENST00000569144 ANKRD31Q8N7Z5 1873 aa8.08□□□□□ -1.12
CDH13-212ENST00000569144 RNF123Q5XPI4 1314 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 A0A087WZG4 1122 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 CFAP99D6REC4 459 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 DXOO77932 396 aaKnown RBP8.07□□□□□ -1.12
CDH13-212ENST00000569144 SRGNP10124 158 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 MAP2K2P36507 400 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 CCDC93Q567U6 631 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 RTL5Q5HYW3 569 aaPredicted RBP8.07□□□□□ -1.12
CDH13-212ENST00000569144 TBC1D9BQ66K14 1250 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 CYP4F22Q6NT55 531 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 MASTLQ96GX5 879 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.07□□□□□ -1.12
CDH13-212ENST00000569144 SLC52A2Q9HAB3 445 aa8.07□□□□□ -1.12
CDH13-212ENST00000569144 FCF1Q9Y324 198 aaKnown RBP8.07□□□□□ -1.12
CDH13-212ENST00000569144 MRC1P22897 1456 aa8.06□□□□□ -1.12
CDH13-212ENST00000569144 TNRC18O15417 2968 aaPredicted RBP8.06□□□□□ -1.12
CDH13-212ENST00000569144 CANXP27824 592 aaKnown RBP8.06□□□□□ -1.12
CDH13-212ENST00000569144 EIF5P55010 431 aaKnown RBP8.06□□□□□ -1.12
CDH13-212ENST00000569144 FKBP4Q02790 459 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDH13-212ENST00000569144 AKAP4Q5JQC9 854 aa8.06□□□□□ -1.12
CDH13-212ENST00000569144 AEBP1Q8IUX7 1158 aa8.06□□□□□ -1.12
CDH13-212ENST00000569144 GPC2Q8N158 579 aa8.06□□□□□ -1.12
CDH13-212ENST00000569144 CCDC24Q8N4L8 307 aa8.06□□□□□ -1.12
CDH13-212ENST00000569144 CNBD1Q8NA66 436 aa8.06□□□□□ -1.12
CDH13-212ENST00000569144 C7orf43Q8WVR3 580 aa8.06□□□□□ -1.12
CDH13-212ENST00000569144 TSC1Q92574 1164 aa8.06□□□□□ -1.12
CDH13-212ENST00000569144 TLL2Q9Y6L7 1015 aa8.06□□□□□ -1.12
CDH13-212ENST00000569144 SCN7AQ01118 1682 aa8.05□□□□□ -1.12
CDH13-212ENST00000569144 ARFGEF2Q9Y6D5 1785 aa8.05□□□□□ -1.12
CDH13-212ENST00000569144 FZD9O00144 591 aa8.05□□□□□ -1.12
CDH13-212ENST00000569144 ST5P78524 1137 aa8.05□□□□□ -1.12
CDH13-212ENST00000569144 GRM1Q13255 1194 aa8.05□□□□□ -1.12
CDH13-212ENST00000569144 SLC39A6Q13433 755 aa8.05□□□□□ -1.12
CDH13-212ENST00000569144 DGKZQ13574 1117 aa8.05□□□□□ -1.12
CDH13-212ENST00000569144 ZNF277Q9NRM2 450 aaPredicted RBP8.05□□□□□ -1.12
CDH13-212ENST00000569144 SLX4Q8IY92 1834 aa8.05□□□□□ -1.12
CDH13-212ENST00000569144 SCN11AQ9UI33 1791 aa8.05□□□□□ -1.12
CDH13-212ENST00000569144 NPHP1O15259 732 aa8.04□□□□□ -1.12
CDH13-212ENST00000569144 AOC2O75106 756 aa8.04□□□□□ -1.12
CDH13-212ENST00000569144 STARD3NLO95772 234 aa8.04□□□□□ -1.12
CDH13-212ENST00000569144 TNNT2P45379 298 aaPredicted RBP8.04□□□□□ -1.12
CDH13-212ENST00000569144 FMR1Q06787 632 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDH13-212ENST00000569144 PLA2G2CQ5R387 149 aa8.04□□□□□ -1.12
CDH13-212ENST00000569144 CST9Q5W186 159 aa8.04□□□□□ -1.12
CDH13-212ENST00000569144 RTKN2Q8IZC4 609 aa8.04□□□□□ -1.12
CDH13-212ENST00000569144 SETDB2Q96T68 719 aa8.04□□□□□ -1.12
CDH13-212ENST00000569144 RNMTO43148 476 aaKnown RBP8.03□□□□□ -1.12
CDH13-212ENST00000569144 RGS20O76081 388 aa8.03□□□□□ -1.12
CDH13-212ENST00000569144 NPR1P16066 1061 aa8.03□□□□□ -1.12
CDH13-212ENST00000569144 IARSP41252 1262 aaKnown RBP8.03□□□□□ -1.12
CDH13-212ENST00000569144 DESI1Q6ICB0 168 aa8.03□□□□□ -1.12
CDH13-212ENST00000569144 SULT6B1Q6IMI4 303 aa8.03□□□□□ -1.12
CDH13-212ENST00000569144 HHIPL1Q96JK4 782 aa8.03□□□□□ -1.12
CDH13-212ENST00000569144 PRKD2Q9BZL6 878 aa8.03□□□□□ -1.12
CDH13-212ENST00000569144 LGR6Q9HBX8 967 aa8.03□□□□□ -1.12
CDH13-212ENST00000569144 LMOD1P29536 600 aaPredicted RBP8.02□□□□□ -1.13
CDH13-212ENST00000569144 IL6STP40189 918 aaPredicted RBP8.02□□□□□ -1.13
CDH13-212ENST00000569144 PPP2R2DQ66LE6 453 aa8.02□□□□□ -1.13
CDH13-212ENST00000569144 USP50Q70EL3 339 aaPredicted RBP8.02□□□□□ -1.13
CDH13-212ENST00000569144 SAPCD2Q86UD0 394 aa8.02□□□□□ -1.13
CDH13-212ENST00000569144 HELBQ8NG08 1087 aaPredicted RBP8.02□□□□□ -1.13
CDH13-212ENST00000569144 JDP2Q8WYK2 163 aa8.02□□□□□ -1.13
CDH13-212ENST00000569144 NUDT12Q9BQG2 462 aa8.02□□□□□ -1.13
CDH13-212ENST00000569144 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
CDH13-212ENST00000569144 KLRG2A4D1S0 409 aaPredicted RBP8.01□□□□□ -1.13
CDH13-212ENST00000569144 TRAF5O00463 557 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 CAMTA2O94983 1202 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 SLC19A1P41440 591 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 SCNN1DP51172 638 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 EIF6P56537 245 aaKnown RBP8.01□□□□□ -1.13
CDH13-212ENST00000569144 SOX10P56693 466 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 PTPRNQ16849 979 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 TTC5Q8N0Z6 440 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 EMID1Q96A84 441 aaPredicted RBP8.01□□□□□ -1.13
CDH13-212ENST00000569144 PSMD1Q99460 953 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 TEX13AQ9BXU3 409 aaPredicted RBP8.01□□□□□ -1.13
CDH13-212ENST00000569144 GJA3Q9Y6H8 435 aa8.01□□□□□ -1.13
CDH13-212ENST00000569144 CACNA1SQ13698 1873 aa8□□□□□ -1.13
CDH13-212ENST00000569144 BCORQ6W2J9 1755 aa8□□□□□ -1.13
CDH13-212ENST00000569144 UBR2Q8IWV8 1755 aa8□□□□□ -1.13
CDH13-212ENST00000569144 CCNYL3P0C7X3 344 aa8□□□□□ -1.13
CDH13-212ENST00000569144 RFC5P40937 340 aa8□□□□□ -1.13
CDH13-212ENST00000569144 EPS15P42566 896 aa8□□□□□ -1.13
CDH13-212ENST00000569144 CIAPIN1Q6FI81 312 aa8□□□□□ -1.13
CDH13-212ENST00000569144 OLFM4Q6UX06 510 aa8□□□□□ -1.13
CDH13-212ENST00000569144 LYPD8Q6UX82 237 aa8□□□□□ -1.13
CDH13-212ENST00000569144 LIAT1Q6ZQX7 453 aa8□□□□□ -1.13
CDH13-212ENST00000569144 NPM2Q86SE8 214 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms