RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 PRKAR2BP31323 418 aa14.97□□□□□ -0.01
CDH3-208ENST00000569036 DCTN1Q14203 1278 aa14.97□□□□□ -0.01
CDH3-208ENST00000569036 MTFR1Q15390 333 aa14.97□□□□□ -0.01
CDH3-208ENST00000569036 NLRP10Q86W26 655 aa14.97□□□□□ -0.01
CDH3-208ENST00000569036 MIS18AQ9NYP9 233 aa14.97□□□□□ -0.01
CDH3-208ENST00000569036 SSC5DA1L4H1 1573 aa14.97□□□□□ -0.01
CDH3-208ENST00000569036 SH3TC1Q8TE82 1336 aa14.96□□□□□ -0.01
CDH3-208ENST00000569036 GJA5P36382 358 aa14.96□□□□□ -0.01
CDH3-208ENST00000569036 MAP3K11Q16584 847 aa14.96□□□□□ -0.01
CDH3-208ENST00000569036 TRMT112Q9UI30 125 aaKnown RBP14.96□□□□□ -0.01
CDH3-208ENST00000569036 TESPA1A2RU30 521 aaPredicted RBP14.95□□□□□ -0.02
CDH3-208ENST00000569036 UFL1O94874 794 aa14.95□□□□□ -0.02
CDH3-208ENST00000569036 SASH1O94885 1247 aa14.95□□□□□ -0.02
CDH3-208ENST00000569036 COL9A1P20849 921 aa14.95□□□□□ -0.02
CDH3-208ENST00000569036 TAF7Q15545 349 aaPredicted RBP14.95□□□□□ -0.02
CDH3-208ENST00000569036 NKX2-3Q8TAU0 364 aa14.95□□□□□ -0.02
CDH3-208ENST00000569036 LAMA2P24043 3122 aaKnown RBP14.95□□□□□ -0.02
CDH3-208ENST00000569036 ALPK3Q96L96 1907 aa14.94□□□□□ -0.02
CDH3-208ENST00000569036 USP17L3A6NCW0 530 aa14.94□□□□□ -0.02
CDH3-208ENST00000569036 USP17L4A6NCW7 530 aa14.94□□□□□ -0.02
CDH3-208ENST00000569036 GJA8P48165 433 aa14.94□□□□□ -0.02
CDH3-208ENST00000569036 USP17L1Q7RTZ2 530 aa14.94□□□□□ -0.02
CDH3-208ENST00000569036 LRP10Q7Z4F1 713 aa14.94□□□□□ -0.02
CDH3-208ENST00000569036 APOBEC3FQ8IUX4 373 aaKnown RBP14.94□□□□□ -0.02
CDH3-208ENST00000569036 ARHGAP39Q9C0H5 1083 aa14.94□□□□□ -0.02
CDH3-208ENST00000569036 RSPH6AQ9H0K4 717 aa14.94□□□□□ -0.02
CDH3-208ENST00000569036 PODXL2Q9NZ53 605 aa14.94□□□□□ -0.02
CDH3-208ENST00000569036 COL1A1P02452 1464 aaPredicted RBP14.94□□□□□ -0.02
CDH3-208ENST00000569036 OTOFQ9HC10 1997 aa14.93□□□□□ -0.02
CDH3-208ENST00000569036 EVI5O60447 810 aa14.93□□□□□ -0.02
CDH3-208ENST00000569036 THUMPD2Q9BTF0 503 aaKnown RBP14.93□□□□□ -0.02
CDH3-208ENST00000569036 FARP2O94887 1054 aaPredicted RBP14.92□□□□□ -0.02
CDH3-208ENST00000569036 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
CDH3-208ENST00000569036 GJB1P08034 283 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 BMP8BP34820 402 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 EIF4A1P60842 406 aaKnown RBP14.91□□□□□ -0.02
CDH3-208ENST00000569036 TAF1CQ15572 869 aaPredicted RBP14.91□□□□□ -0.02
CDH3-208ENST00000569036 LRIT3Q3SXY7 679 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 HSP90AB3PQ58FF7 597 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 OGFOD1Q8N543 542 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 ZNF428Q96B54 188 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 GDF15Q99988 308 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 MXD3Q9BW11 206 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 ZFYVE28Q9HCC9 887 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 GGA1Q9UJY5 639 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 RPTORQ8N122 1335 aa14.91□□□□□ -0.02
CDH3-208ENST00000569036 UNCXA6NJT0 531 aa14.9□□□□□ -0.02
CDH3-208ENST00000569036 ANKIB1Q9P2G1 1089 aa14.9□□□□□ -0.02
CDH3-208ENST00000569036 RAPGEFL1Q9UHV5 662 aa14.9□□□□□ -0.02
CDH3-208ENST00000569036 HTATSF1O43719 755 aaKnown RBP14.89□□□□□ -0.03
CDH3-208ENST00000569036 PPP1R12BO60237 982 aaPredicted RBP14.89□□□□□ -0.03
CDH3-208ENST00000569036 CCL5P13501 91 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 BCAMP50895 628 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 PRMT2P55345 433 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 RPS8P62241 208 aaKnown RBP14.89□□□□□ -0.03
CDH3-208ENST00000569036 LACTBP83111 547 aaPredicted RBP14.89□□□□□ -0.03
CDH3-208ENST00000569036 PDIA6Q15084 440 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 DACT2Q5SW24 774 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 PODNQ7Z5L7 613 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 BRI3BPQ8WY22 251 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 MS4A4AQ96JQ5 239 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 DEFB129Q9H1M3 183 aa14.89□□□□□ -0.03
CDH3-208ENST00000569036 ECM29Q5VYK3 1845 aa14.88□□□□□ -0.03
CDH3-208ENST00000569036 GNRH1P01148 92 aa14.88□□□□□ -0.03
CDH3-208ENST00000569036 PLA2G5P39877 138 aa14.88□□□□□ -0.03
CDH3-208ENST00000569036 KIF22Q14807 665 aa14.88□□□□□ -0.03
CDH3-208ENST00000569036 ANXA1P04083 346 aa14.87□□□□□ -0.03
CDH3-208ENST00000569036 PNISRQ8TF01 805 aaKnown RBP14.87□□□□□ -0.03
CDH3-208ENST00000569036 ZBED3Q96IU2 234 aaPredicted RBP14.87□□□□□ -0.03
CDH3-208ENST00000569036 RNF208Q9H0X6 261 aa14.87□□□□□ -0.03
CDH3-208ENST00000569036 GRK4P32298 578 aa14.86□□□□□ -0.03
CDH3-208ENST00000569036 IREB2P48200 963 aaKnown RBP14.86□□□□□ -0.03
CDH3-208ENST00000569036 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
CDH3-208ENST00000569036 U2AF1L4Q8WU68 220 aaKnown RBP14.86□□□□□ -0.03
CDH3-208ENST00000569036 OPTNQ96CV9 577 aa14.86□□□□□ -0.03
CDH3-208ENST00000569036 GUCD1Q96NT3 240 aa14.86□□□□□ -0.03
CDH3-208ENST00000569036 MYO3BQ8WXR4 1341 aa14.86□□□□□ -0.03
CDH3-208ENST00000569036 DLG5Q8TDM6 1919 aa14.86□□□□□ -0.03
CDH3-208ENST00000569036 CC2D1BQ5T0F9 858 aaKnown RBP14.85□□□□□ -0.03
CDH3-208ENST00000569036 ANKRD13AQ8IZ07 590 aa14.85□□□□□ -0.03
CDH3-208ENST00000569036 FAM89AQ96GI7 184 aa14.85□□□□□ -0.03
CDH3-208ENST00000569036 ELP3Q9H9T3 547 aa14.85□□□□□ -0.03
CDH3-208ENST00000569036 CCL15-CCL14A0A0B4J2E2 113 aa14.84□□□□□ -0.03
CDH3-208ENST00000569036 TLR2O60603 784 aa14.84□□□□□ -0.03
CDH3-208ENST00000569036 USP2O75604 605 aaPredicted RBP14.84□□□□□ -0.03
CDH3-208ENST00000569036 MMP14P50281 582 aa14.84□□□□□ -0.03
CDH3-208ENST00000569036 CCL15Q16663 113 aa14.84□□□□□ -0.03
CDH3-208ENST00000569036 TDHQ8IZJ6 230 aa14.84□□□□□ -0.03
CDH3-208ENST00000569036 FBXW7Q969H0 707 aa14.84□□□□□ -0.03
CDH3-208ENST00000569036 SRRDQ9UH36 339 aa14.84□□□□□ -0.03
CDH3-208ENST00000569036 RIPOR2Q9Y4F9 1068 aa14.84□□□□□ -0.03
CDH3-208ENST00000569036 PPP2R3BQ9Y5P8 575 aa14.84□□□□□ -0.03
CDH3-208ENST00000569036 ECM2O94769 699 aaPredicted RBP14.83□□□□□ -0.04
CDH3-208ENST00000569036 CTGFP29279 349 aa14.83□□□□□ -0.04
CDH3-208ENST00000569036 AIMP1Q12904 312 aaKnown RBP14.83□□□□□ -0.04
CDH3-208ENST00000569036 STRIP1Q5VSL9 837 aa14.83□□□□□ -0.04
CDH3-208ENST00000569036 COPS6Q7L5N1 327 aa14.83□□□□□ -0.04
CDH3-208ENST00000569036 XAGE3Q8WTP9 111 aa14.83□□□□□ -0.04
CDH3-208ENST00000569036 SEC31BQ9NQW1 1179 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms