RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 PDCL2Q8N4E4 241 aa21.52■■□□□ 1.03
PKD1-235ENST00000568591 FMNL2Q96PY5 1086 aa21.52■■□□□ 1.03
PKD1-235ENST00000568591 RCOR1Q9UKL0 485 aa21.52■■□□□ 1.03
PKD1-235ENST00000568591 AFDNP55196 1824 aaKnown RBP21.52■■□□□ 1.03
PKD1-235ENST00000568591 CTIFO43310 598 aaKnown RBP21.51■■□□□ 1.03
PKD1-235ENST00000568591 TNNT1P13805 278 aa21.51■■□□□ 1.03
PKD1-235ENST00000568591 MAST3O60307 1309 aa21.51■■□□□ 1.03
PKD1-235ENST00000568591 PUS3Q9BZE2 481 aaKnown RBP21.51■■□□□ 1.03
PKD1-235ENST00000568591 TRPM3Q9HCF6 1732 aaPredicted RBP21.51■■□□□ 1.03
PKD1-235ENST00000568591 LAMA4Q16363 1823 aa21.51■■□□□ 1.03
PKD1-235ENST00000568591 M0R2C6 588 aa21.5■■□□□ 1.03
PKD1-235ENST00000568591 HSP90AB3PQ58FF7 597 aa21.5■■□□□ 1.03
PKD1-235ENST00000568591 ANKRD7Q92527 254 aa21.5■■□□□ 1.03
PKD1-235ENST00000568591 GJB4Q9NTQ9 266 aa21.5■■□□□ 1.03
PKD1-235ENST00000568591 PDIA3P30101 505 aaKnown RBP21.5■■□□□ 1.03
PKD1-235ENST00000568591 NCBP1Q09161 790 aaKnown RBP21.5■■□□□ 1.03
PKD1-235ENST00000568591 NAA16Q6N069 864 aaPredicted RBP21.5■■□□□ 1.03
PKD1-235ENST00000568591 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.5■■□□□ 1.03
PKD1-235ENST00000568591 SMAP1Q8IYB5 467 aaPredicted RBP21.5■■□□□ 1.03
PKD1-235ENST00000568591 PLBD2Q8NHP8 589 aa21.5■■□□□ 1.03
PKD1-235ENST00000568591 RFX7Q2KHR2 1363 aa21.49■■□□□ 1.03
PKD1-235ENST00000568591 GOLGA6L19H0YKK7 550 aa21.49■■□□□ 1.03
PKD1-235ENST00000568591 FDPSP14324 419 aaKnown RBP21.49■■□□□ 1.03
PKD1-235ENST00000568591 ME1P48163 572 aa21.49■■□□□ 1.03
PKD1-235ENST00000568591 HAND2P61296 217 aa21.49■■□□□ 1.03
PKD1-235ENST00000568591 ZMYM1Q5SVZ6 1142 aa21.49■■□□□ 1.03
PKD1-235ENST00000568591 DHX40Q8IX18 779 aaKnown RBP21.49■■□□□ 1.03
PKD1-235ENST00000568591 SALL1Q9NSC2 1324 aa21.49■■□□□ 1.03
PKD1-235ENST00000568591 FILIP1Q7Z7B0 1213 aa21.49■■□□□ 1.03
PKD1-235ENST00000568591 FSIP1Q8NA03 581 aa21.49■■□□□ 1.03
PKD1-235ENST00000568591 ENGASEQ8NFI3 743 aa21.49■■□□□ 1.03
PKD1-235ENST00000568591 LLPHQ9BRT6 129 aaKnown RBP21.49■■□□□ 1.03
PKD1-235ENST00000568591 ZSCAN20P17040 1043 aaPredicted RBP21.48■■□□□ 1.03
PKD1-235ENST00000568591 CABP4P57796 275 aa21.48■■□□□ 1.03
PKD1-235ENST00000568591 TPD52L1Q16890 204 aaPredicted RBP21.48■■□□□ 1.03
PKD1-235ENST00000568591 LRRC8AQ8IWT6 810 aa21.48■■□□□ 1.03
PKD1-235ENST00000568591 ZNF592Q92610 1267 aa21.48■■□□□ 1.03
PKD1-235ENST00000568591 DCAF5Q96JK2 942 aa21.48■■□□□ 1.03
PKD1-235ENST00000568591 ZBTB3Q9H5J0 574 aa21.48■■□□□ 1.03
PKD1-235ENST00000568591 ARFGEF2Q9Y6D5 1785 aa21.48■■□□□ 1.03
PKD1-235ENST00000568591 PROSER2Q86WR7 435 aaPredicted RBP21.48■■□□□ 1.03
PKD1-235ENST00000568591 PALLDQ8WX93 1383 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 A0A1B0GVL5 298 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 H7C1W4 665 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 A1BGP04217 495 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 STX1AQ16623 288 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 OSBP2Q969R2 916 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 CCDC85AQ96PX6 553 aaPredicted RBP21.47■■□□□ 1.03
PKD1-235ENST00000568591 DSCC1Q9BVC3 393 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 AGXT2Q9BYV1 514 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 CCDC73Q6ZRK6 1079 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 HELLSQ9NRZ9 838 aa21.47■■□□□ 1.03
PKD1-235ENST00000568591 A0A1B0GUL7 405 aa21.46■■□□□ 1.03
PKD1-235ENST00000568591 IFIT1P09914 478 aaKnown RBP21.46■■□□□ 1.03
PKD1-235ENST00000568591 FKBP4Q02790 459 aaKnown RBP eCLIP21.46■■□□□ 1.03
PKD1-235ENST00000568591 PCDHA7Q9UN72 937 aa21.46■■□□□ 1.03
PKD1-235ENST00000568591 CARMIL3Q8ND23 1372 aa21.46■■□□□ 1.03
PKD1-235ENST00000568591 C1orf167Q5SNV9 1468 aa21.46■■□□□ 1.03
PKD1-235ENST00000568591 FOXP2O15409 715 aa21.46■■□□□ 1.03
PKD1-235ENST00000568591 KINO60870 393 aaKnown RBP21.46■■□□□ 1.03
PKD1-235ENST00000568591 POLR3DP05423 398 aaPredicted RBP21.46■■□□□ 1.03
PKD1-235ENST00000568591 HMGB1P09429 215 aaKnown RBP21.46■■□□□ 1.03
PKD1-235ENST00000568591 AOPEPQ8N6M6 819 aa21.46■■□□□ 1.03
PKD1-235ENST00000568591 ZHX1Q9UKY1 873 aaPredicted RBP21.46■■□□□ 1.03
PKD1-235ENST00000568591 TAOK2Q9UL54 1235 aa21.46■■□□□ 1.03
PKD1-235ENST00000568591 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.02
PKD1-235ENST00000568591 BECN2A8MW95 431 aa21.45■■□□□ 1.02
PKD1-235ENST00000568591 FAM160A1Q05DH4 1040 aa21.45■■□□□ 1.02
PKD1-235ENST00000568591 PDE4CQ08493 712 aa21.45■■□□□ 1.02
PKD1-235ENST00000568591 TRMT1Q9NXH9 659 aaKnown RBP21.45■■□□□ 1.02
PKD1-235ENST00000568591 RNF113AO15541 343 aaKnown RBP21.44■■□□□ 1.02
PKD1-235ENST00000568591 ADORA1P30542 326 aa21.44■■□□□ 1.02
PKD1-235ENST00000568591 SARM1Q6SZW1 724 aa21.44■■□□□ 1.02
PKD1-235ENST00000568591 CLIC4Q9Y696 253 aa21.44■■□□□ 1.02
PKD1-235ENST00000568591 NDUFA8P51970 172 aa21.44■■□□□ 1.02
PKD1-235ENST00000568591 SMTNL1A8MU46 457 aa21.43■■□□□ 1.02
PKD1-235ENST00000568591 CDC25BP30305 580 aa21.43■■□□□ 1.02
PKD1-235ENST00000568591 PI16Q6UXB8 463 aa21.43■■□□□ 1.02
PKD1-235ENST00000568591 CWC25Q9NXE8 425 aaPredicted RBP21.43■■□□□ 1.02
PKD1-235ENST00000568591 CCDC69A6NI79 296 aa21.43■■□□□ 1.02
PKD1-235ENST00000568591 SKILP12757 684 aa21.43■■□□□ 1.02
PKD1-235ENST00000568591 SCARF1Q14162 830 aa21.43■■□□□ 1.02
PKD1-235ENST00000568591 MRFAP1L1Q96HT8 127 aa21.43■■□□□ 1.02
PKD1-235ENST00000568591 EYA2O00167 538 aa21.42■■□□□ 1.02
PKD1-235ENST00000568591 FMR1NBQ8N0W7 255 aaPredicted RBP21.42■■□□□ 1.02
PKD1-235ENST00000568591 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.42■■□□□ 1.023e-10■■■■□ 19.3
PKD1-235ENST00000568591 DENND2AQ9ULE3 1009 aa21.42■■□□□ 1.02
PKD1-235ENST00000568591 V9GYY5 206 aaPredicted RBP21.42■■□□□ 1.02
PKD1-235ENST00000568591 GLI3P10071 1580 aa21.42■■□□□ 1.02
PKD1-235ENST00000568591 IL15P40933 162 aaPredicted RBP21.42■■□□□ 1.02
PKD1-235ENST00000568591 CCZ1BP86790 482 aa21.42■■□□□ 1.02
PKD1-235ENST00000568591 CCZ1P86791 482 aaPredicted RBP21.42■■□□□ 1.02
PKD1-235ENST00000568591 DPCR1Q3MIW9 517 aa21.42■■□□□ 1.02
PKD1-235ENST00000568591 NKX2-3Q8TAU0 364 aa21.42■■□□□ 1.02
PKD1-235ENST00000568591 ZNF396Q96N95 335 aaPredicted RBP21.42■■□□□ 1.02
PKD1-235ENST00000568591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.42■■□□□ 1.02
PKD1-235ENST00000568591 MYH15Q9Y2K3 1946 aa21.41■■□□□ 1.02
PKD1-235ENST00000568591 IGSF3O75054 1194 aa21.41■■□□□ 1.02
PKD1-235ENST00000568591 BIN1O00499 593 aa21.4■■□□□ 1.02
PKD1-235ENST00000568591 CTAGE5O15320 804 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms