RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 SOS2Q07890 1332 aaPredicted RBP20.11■□□□□ 0.81
VAC14-210ENST00000568548 MCMDC2Q4G0Z9 681 aa20.11■□□□□ 0.81
VAC14-210ENST00000568548 LRRC24Q50LG9 513 aa20.11■□□□□ 0.81
VAC14-210ENST00000568548 METTL22Q9BUU2 404 aaPredicted RBP20.11■□□□□ 0.81
VAC14-210ENST00000568548 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
VAC14-210ENST00000568548 CYP27B1O15528 508 aa20.11■□□□□ 0.81
VAC14-210ENST00000568548 ZBTB3Q9H5J0 574 aa20.11■□□□□ 0.81
VAC14-210ENST00000568548 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
VAC14-210ENST00000568548 TTC5Q8N0Z6 440 aa20.1■□□□□ 0.81
VAC14-210ENST00000568548 ELP1O95163 1332 aa20.1■□□□□ 0.81
VAC14-210ENST00000568548 ATP5JP18859 108 aa20.09■□□□□ 0.81
VAC14-210ENST00000568548 FSIP1Q8NA03 581 aa20.09■□□□□ 0.81
VAC14-210ENST00000568548 NSUN7Q8NE18 718 aaKnown RBP20.09■□□□□ 0.81
VAC14-210ENST00000568548 PUS3Q9BZE2 481 aaKnown RBP20.09■□□□□ 0.81
VAC14-210ENST00000568548 RFX5P48382 616 aaPredicted RBP20.09■□□□□ 0.81
VAC14-210ENST00000568548 NCBP1Q09161 790 aaKnown RBP20.09■□□□□ 0.81
VAC14-210ENST00000568548 PLA2G4DQ86XP0 818 aa20.09■□□□□ 0.81
VAC14-210ENST00000568548 AOPEPQ8N6M6 819 aa20.09■□□□□ 0.81
VAC14-210ENST00000568548 SCN11AQ9UI33 1791 aa20.09■□□□□ 0.81
VAC14-210ENST00000568548 GTF2F1P35269 517 aaKnown RBP eCLIP20.09■□□□□ 0.81
VAC14-210ENST00000568548 TTLL7Q6ZT98 887 aa20.09■□□□□ 0.81
VAC14-210ENST00000568548 SDF4Q9BRK5 362 aa20.09■□□□□ 0.81
VAC14-210ENST00000568548 ABCC6O95255 1503 aa20.08■□□□□ 0.81
VAC14-210ENST00000568548 RXRAP19793 462 aa20.08■□□□□ 0.8
VAC14-210ENST00000568548 ADD1P35611 737 aaKnown RBP20.08■□□□□ 0.8
VAC14-210ENST00000568548 PI16Q6UXB8 463 aa20.08■□□□□ 0.8
VAC14-210ENST00000568548 TOM1L2Q6ZVM7 507 aa20.08■□□□□ 0.8
VAC14-210ENST00000568548 DCAF5Q96JK2 942 aa20.08■□□□□ 0.8
VAC14-210ENST00000568548 HDAC5Q9UQL6 1122 aa20.08■□□□□ 0.8
VAC14-210ENST00000568548 ZBTB9Q96C00 473 aa20.07■□□□□ 0.8
VAC14-210ENST00000568548 SKILP12757 684 aa20.07■□□□□ 0.8
VAC14-210ENST00000568548 CCDC112Q8NEF3 446 aa20.07■□□□□ 0.8
VAC14-210ENST00000568548 HMG20BQ9P0W2 317 aa20.07■□□□□ 0.8
VAC14-210ENST00000568548 DENND2AQ9ULE3 1009 aa20.07■□□□□ 0.8
VAC14-210ENST00000568548 WASHC4Q2M389 1173 aa20.06■□□□□ 0.8
VAC14-210ENST00000568548 HSP90AA4PQ58FG1 418 aa20.06■□□□□ 0.8
VAC14-210ENST00000568548 KINO60870 393 aaKnown RBP20.06■□□□□ 0.8
VAC14-210ENST00000568548 A1BGP04217 495 aa20.06■□□□□ 0.8
VAC14-210ENST00000568548 IQCB1Q15051 598 aa20.06■□□□□ 0.8
VAC14-210ENST00000568548 CCDC73Q6ZRK6 1079 aa20.06■□□□□ 0.8
VAC14-210ENST00000568548 TDRD7Q8NHU6 1098 aaKnown RBP20.06■□□□□ 0.8
VAC14-210ENST00000568548 CFAP45Q9UL16 551 aa20.06■□□□□ 0.8
VAC14-210ENST00000568548 U3KPZ7 1027 aaPredicted RBP20.06■□□□□ 0.8
VAC14-210ENST00000568548 WDR17Q8IZU2 1322 aa20.05■□□□□ 0.8
VAC14-210ENST00000568548 E7EWF7 191 aa20.05■□□□□ 0.8
VAC14-210ENST00000568548 DHX32Q7L7V1 743 aaKnown RBP20.05■□□□□ 0.8
VAC14-210ENST00000568548 COPRSQ9NQ92 184 aa20.05■□□□□ 0.8
VAC14-210ENST00000568548 PAG1Q9NWQ8 432 aa20.05■□□□□ 0.8
VAC14-210ENST00000568548 TPM3P06753 285 aa20.05■□□□□ 0.8
VAC14-210ENST00000568548 DMTNQ08495 405 aa20.05■□□□□ 0.8
VAC14-210ENST00000568548 SNW1Q13573 536 aaKnown RBP20.05■□□□□ 0.8
VAC14-210ENST00000568548 KRT32Q14532 448 aa20.05■□□□□ 0.8
VAC14-210ENST00000568548 ILDR1Q86SU0 546 aaPredicted RBP20.05■□□□□ 0.8
VAC14-210ENST00000568548 LRRC8AQ8IWT6 810 aa20.05■□□□□ 0.8
VAC14-210ENST00000568548 CCDC69A6NI79 296 aa20.04■□□□□ 0.8
VAC14-210ENST00000568548 SF3A1Q15459 793 aaKnown RBP20.04■□□□□ 0.8
VAC14-210ENST00000568548 USPL1Q5W0Q7 1092 aa20.04■□□□□ 0.8
VAC14-210ENST00000568548 CLIC4Q9Y696 253 aa20.04■□□□□ 0.8
VAC14-210ENST00000568548 UTYO14607 1347 aa20.04■□□□□ 0.8
VAC14-210ENST00000568548 A0A0U1RQG5 324 aaPredicted RBP20.04■□□□□ 0.8
VAC14-210ENST00000568548 HSPD1P10809 573 aaKnown RBP20.04■□□□□ 0.8
VAC14-210ENST00000568548 AIFM3Q96NN9 605 aa20.04■□□□□ 0.8
VAC14-210ENST00000568548 HAUS7Q99871 368 aa20.04■□□□□ 0.8
VAC14-210ENST00000568548 MARCKSP29966 332 aaPredicted RBP20.03■□□□□ 0.8
VAC14-210ENST00000568548 CABP4P57796 275 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 CEP135Q66GS9 1140 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 ZNF771Q7L3S4 317 aaPredicted RBP20.03■□□□□ 0.8
VAC14-210ENST00000568548 M0R2C6 588 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 NDUFA8P51970 172 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 KBTBD3Q8NAB2 608 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 SMC2O95347 1197 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 PDIA3P30101 505 aaKnown RBP20.03■□□□□ 0.8
VAC14-210ENST00000568548 GOLGA8FQ08AF8 430 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 GOLGA8DPQ0D2H9 430 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 STRN4Q9NRL3 753 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 ZNF215Q9UL58 517 aaPredicted RBP20.03■□□□□ 0.8
VAC14-210ENST00000568548 PCDHA7Q9UN72 937 aa20.03■□□□□ 0.8
VAC14-210ENST00000568548 SNRPA1P09661 255 aaKnown RBP20.02■□□□□ 0.8
VAC14-210ENST00000568548 IFIT1P09914 478 aaKnown RBP20.02■□□□□ 0.8
VAC14-210ENST00000568548 ADORA1P30542 326 aa20.02■□□□□ 0.8
VAC14-210ENST00000568548 DPCR1Q3MIW9 517 aa20.02■□□□□ 0.8
VAC14-210ENST00000568548 GORABQ5T7V8 394 aa20.02■□□□□ 0.79
VAC14-210ENST00000568548 DHX40Q8IX18 779 aaKnown RBP20.02■□□□□ 0.79
VAC14-210ENST00000568548 PKD1L3Q7Z443 1732 aa20.01■□□□□ 0.79
VAC14-210ENST00000568548 PFKFB2O60825 505 aa20.01■□□□□ 0.79
VAC14-210ENST00000568548 SYNE4Q8N205 404 aa20.01■□□□□ 0.79
VAC14-210ENST00000568548 NKX2-3Q8TAU0 364 aa20.01■□□□□ 0.79
VAC14-210ENST00000568548 OSBP2Q969R2 916 aa20.01■□□□□ 0.79
VAC14-210ENST00000568548 FDPSP14324 419 aaKnown RBP20.01■□□□□ 0.79
VAC14-210ENST00000568548 RBM43Q6ZSC3 357 aaKnown RBP20.01■□□□□ 0.79
VAC14-210ENST00000568548 ZCRB1Q8TBF4 217 aaKnown RBP20.01■□□□□ 0.79
VAC14-210ENST00000568548 C5P01031 1676 aa20■□□□□ 0.79
VAC14-210ENST00000568548 TSGA10IPQ3SY00 556 aa20■□□□□ 0.79
VAC14-210ENST00000568548 ATG9AQ7Z3C6 839 aa20■□□□□ 0.79
VAC14-210ENST00000568548 COL5A2P05997 1499 aaPredicted RBP20■□□□□ 0.79
VAC14-210ENST00000568548 PLEKHG2Q9H7P9 1386 aa20■□□□□ 0.79
VAC14-210ENST00000568548 NBPF26B4DH59 902 aa20■□□□□ 0.79
VAC14-210ENST00000568548 STX1AQ16623 288 aa20■□□□□ 0.79
VAC14-210ENST00000568548 NBPF14Q5TI25 921 aa20■□□□□ 0.79
VAC14-210ENST00000568548 NBPF10Q6P3W6 841 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms