RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 UFL1O94874 794 aa12.03□□□□□ -0.48
SF3B3-211ENST00000568291 HSP90B1P14625 803 aaKnown RBP12.03□□□□□ -0.48
SF3B3-211ENST00000568291 MAP2K2P36507 400 aa12.03□□□□□ -0.48
SF3B3-211ENST00000568291 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
SF3B3-211ENST00000568291 CDC37L1Q7L3B6 337 aa12.03□□□□□ -0.48
SF3B3-211ENST00000568291 HELBQ8NG08 1087 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-211ENST00000568291 SUCLG2Q96I99 432 aa12.03□□□□□ -0.48
SF3B3-211ENST00000568291 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-211ENST00000568291 ECE2O60344 883 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 CSF1RP07333 972 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 TBC1D10BQ4KMP7 808 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-211ENST00000568291 DPF2Q92785 391 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 KAZALD1Q96I82 304 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 HHIPL1Q96JK4 782 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 CDC5LQ99459 802 aaKnown RBP12.02□□□□□ -0.49
SF3B3-211ENST00000568291 EYA3Q99504 573 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 PLA2G12BQ9BX93 195 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 RTL9Q8NET4 1388 aa12.02□□□□□ -0.49
SF3B3-211ENST00000568291 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-211ENST00000568291 CA12O43570 354 aa12.01□□□□□ -0.49
SF3B3-211ENST00000568291 TAF5LO75529 589 aa12.01□□□□□ -0.49
SF3B3-211ENST00000568291 ALDH1L1O75891 902 aa12.01□□□□□ -0.49
SF3B3-211ENST00000568291 KLRK1P26718 216 aa12.01□□□□□ -0.49
SF3B3-211ENST00000568291 DSG3P32926 999 aa12.01□□□□□ -0.49
SF3B3-211ENST00000568291 BRPF1P55201 1214 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-211ENST00000568291 SAMD7Q7Z3H4 446 aa12.01□□□□□ -0.49
SF3B3-211ENST00000568291 USP48Q86UV5 1035 aa12.01□□□□□ -0.49
SF3B3-211ENST00000568291 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-211ENST00000568291 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-211ENST00000568291 GGA1Q9UJY5 639 aa12.01□□□□□ -0.49
SF3B3-211ENST00000568291 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
SF3B3-211ENST00000568291 PLIN1O60240 522 aa12□□□□□ -0.49
SF3B3-211ENST00000568291 EGFRP00533 1210 aa12□□□□□ -0.49
SF3B3-211ENST00000568291 RPS12P25398 132 aaKnown RBP12□□□□□ -0.49
SF3B3-211ENST00000568291 IGHMBP2P38935 993 aaKnown RBP12□□□□□ -0.49
SF3B3-211ENST00000568291 HUNKP57058 714 aa12□□□□□ -0.49
SF3B3-211ENST00000568291 KRT26Q7Z3Y9 468 aa12□□□□□ -0.49
SF3B3-211ENST00000568291 MPHOSPH8Q99549 860 aa12□□□□□ -0.49
SF3B3-211ENST00000568291 ZC3H12CQ9C0D7 883 aaKnown RBP12□□□□□ -0.49
SF3B3-211ENST00000568291 USP44Q9H0E7 712 aa12□□□□□ -0.49
SF3B3-211ENST00000568291 PTPRCP08575 1304 aa12□□□□□ -0.49
SF3B3-211ENST00000568291 ADM5C9JUS6 153 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 NOGQ13253 232 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 IFIT5Q13325 482 aaKnown RBP11.99□□□□□ -0.49
SF3B3-211ENST00000568291 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 DLK2Q6UY11 383 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 TXNRD3Q86VQ6 643 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 KLHDC4Q8TBB5 520 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 CLUAP1Q96AJ1 413 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 PUS3Q9BZE2 481 aaKnown RBP11.99□□□□□ -0.49
SF3B3-211ENST00000568291 BICC1Q9H694 974 aaKnown RBP11.99□□□□□ -0.49
SF3B3-211ENST00000568291 PODXL2Q9NZ53 605 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 ZNF609O15014 1411 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 PAPPA2Q9BXP8 1791 aa11.99□□□□□ -0.49
SF3B3-211ENST00000568291 XDHP47989 1333 aa11.98□□□□□ -0.49
SF3B3-211ENST00000568291 CCDC85CA6NKD9 419 aa11.98□□□□□ -0.49
SF3B3-211ENST00000568291 G3V3G9 751 aa11.98□□□□□ -0.49
SF3B3-211ENST00000568291 CHRNDQ07001 517 aa11.98□□□□□ -0.49
SF3B3-211ENST00000568291 DCAF8Q5TAQ9 597 aa11.98□□□□□ -0.49
SF3B3-211ENST00000568291 ANKRD44Q8N8A2 993 aa11.98□□□□□ -0.49
SF3B3-211ENST00000568291 MXD3Q9BW11 206 aa11.98□□□□□ -0.49
SF3B3-211ENST00000568291 GBA2Q9HCG7 927 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-211ENST00000568291 GGA3Q9NZ52 723 aa11.98□□□□□ -0.49
SF3B3-211ENST00000568291 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
SF3B3-211ENST00000568291 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-211ENST00000568291 ATP2B4P23634 1241 aa11.97□□□□□ -0.49
SF3B3-211ENST00000568291 CCT4P50991 539 aaKnown RBP11.97□□□□□ -0.49
SF3B3-211ENST00000568291 CCDC57Q2TAC2 916 aa11.97□□□□□ -0.49
SF3B3-211ENST00000568291 TAF7LQ5H9L4 462 aa11.97□□□□□ -0.49
SF3B3-211ENST00000568291 RBM26Q5T8P6 1007 aaKnown RBP11.97□□□□□ -0.49
SF3B3-211ENST00000568291 DCPSQ96C86 337 aaKnown RBP11.97□□□□□ -0.49
SF3B3-211ENST00000568291 ZIC5Q96T25 663 aa11.97□□□□□ -0.49
SF3B3-211ENST00000568291 A0A1B0GUL6 1792 aa11.97□□□□□ -0.49
SF3B3-211ENST00000568291 VIL1P09327 827 aaKnown RBP11.96□□□□□ -0.49
SF3B3-211ENST00000568291 RGMBQ6NW40 437 aa11.96□□□□□ -0.49
SF3B3-211ENST00000568291 LDHAL6AQ6ZMR3 332 aa11.96□□□□□ -0.49
SF3B3-211ENST00000568291 SULF1Q8IWU6 871 aa11.96□□□□□ -0.49
SF3B3-211ENST00000568291 C2orf69Q8N8R5 385 aa11.96□□□□□ -0.49
SF3B3-211ENST00000568291 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
SF3B3-211ENST00000568291 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.49
SF3B3-211ENST00000568291 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.49
SF3B3-211ENST00000568291 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
SF3B3-211ENST00000568291 UTYO14607 1347 aa11.95□□□□□ -0.5
SF3B3-211ENST00000568291 ASTN2O75129 1339 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-211ENST00000568291 FAM155AB1AL88 458 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-211ENST00000568291 KCNJ4P48050 445 aa11.95□□□□□ -0.5
SF3B3-211ENST00000568291 LRRC24Q50LG9 513 aa11.95□□□□□ -0.5
SF3B3-211ENST00000568291 MEIS3Q99687 375 aa11.95□□□□□ -0.5
SF3B3-211ENST00000568291 API5Q9BZZ5 524 aaKnown RBP11.95□□□□□ -0.5
SF3B3-211ENST00000568291 CNNM1Q9NRU3 951 aa11.95□□□□□ -0.5
SF3B3-211ENST00000568291 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
SF3B3-211ENST00000568291 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
SF3B3-211ENST00000568291 TRIM27P14373 513 aa11.94□□□□□ -0.5
SF3B3-211ENST00000568291 DGKZQ13574 1117 aa11.94□□□□□ -0.5
SF3B3-211ENST00000568291 RSBN1LQ6PCB5 846 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-211ENST00000568291 CDCA5Q96FF9 252 aa11.94□□□□□ -0.5
SF3B3-211ENST00000568291 ANKRD2Q9GZV1 360 aa11.94□□□□□ -0.5
SF3B3-211ENST00000568291 JAG2Q9Y219 1238 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms