RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 K7ELQ4 463 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 SERPINB2P05120 415 aa13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 ZFYP08048 801 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 PTH1RQ03431 593 aa13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 UBE4AQ14139 1066 aa13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 ZNF827Q17R98 1081 aa13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 ZSCAN25Q6NSZ9 544 aa13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 CCDC24Q8N4L8 307 aa13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 ANKRD2Q9GZV1 360 aa13.06□□□□□ -0.32
VPS9D1-206ENST00000567379 ZAP70P43403 619 aa13.05□□□□□ -0.32
VPS9D1-206ENST00000567379 PHKA1P46020 1223 aa13.05□□□□□ -0.32
VPS9D1-206ENST00000567379 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
VPS9D1-206ENST00000567379 NLGN1Q8N2Q7 840 aa13.05□□□□□ -0.32
VPS9D1-206ENST00000567379 CELF1Q92879 486 aaKnown RBP13.05□□□□□ -0.32
VPS9D1-206ENST00000567379 MAP4K1Q92918 833 aa13.05□□□□□ -0.32
VPS9D1-206ENST00000567379 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.05□□□□□ -0.32
VPS9D1-206ENST00000567379 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
VPS9D1-206ENST00000567379 MINPP1Q9UNW1 487 aa13.05□□□□□ -0.32
VPS9D1-206ENST00000567379 TAF1P21675 1872 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 AKAP11Q9UKA4 1901 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 MCAMP43121 646 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 MCM2P49736 904 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 NEK4P51957 841 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 SCARF1Q14162 830 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 RNF20Q5VTR2 975 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 RPGRQ92834 1020 aaKnown RBP13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 ANTXR1Q9H6X2 564 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 GNL3LQ9NVN8 582 aaKnown RBP13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 RBM8AQ9Y5S9 174 aaKnown RBP13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 SNX14Q9Y5W7 946 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 TNRC6CQ9HCJ0 1690 aaKnown RBP13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
VPS9D1-206ENST00000567379 MYH7P12883 1935 aa13.03□□□□□ -0.32
VPS9D1-206ENST00000567379 HSP90AA1P07900 732 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-206ENST00000567379 GRAPQ13588 217 aa13.03□□□□□ -0.32
VPS9D1-206ENST00000567379 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-206ENST00000567379 ZNF589Q86UQ0 364 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-206ENST00000567379 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-206ENST00000567379 GRAPLQ8TC17 118 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-206ENST00000567379 KCNB2Q92953 911 aa13.03□□□□□ -0.32
VPS9D1-206ENST00000567379 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-206ENST00000567379 COL4A1P02462 1669 aa13.02□□□□□ -0.32
VPS9D1-206ENST00000567379 POLRMTO00411 1230 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 DDR1Q08345 913 aa13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 NECTIN1Q15223 517 aa13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 WASHC4Q2M389 1173 aa13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 CAVIN4Q5BKX8 364 aa13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 CREB3L3Q68CJ9 461 aa13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 SPATA5Q8NB90 893 aa13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 SYT17Q9BSW7 474 aa13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 SLKQ9H2G2 1235 aaPredicted RBP13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.33
VPS9D1-206ENST00000567379 SNAP23O00161 211 aa13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 CYP2E1P05181 493 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 PSMA5P28066 241 aa13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 BCAMP50895 628 aa13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 APPBP2Q92624 585 aa13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 SEC62Q99442 399 aaKnown RBP13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 DSCC1Q9BVC3 393 aa13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 TM6SF1Q9BZW5 370 aa13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
VPS9D1-206ENST00000567379 SLC27A2O14975 620 aa13□□□□□ -0.33
VPS9D1-206ENST00000567379 RASGRF1Q13972 1273 aa13□□□□□ -0.33
VPS9D1-206ENST00000567379 CRY2Q49AN0 593 aa13□□□□□ -0.33
VPS9D1-206ENST00000567379 VPS37DQ86XT2 251 aa13□□□□□ -0.33
VPS9D1-206ENST00000567379 RASEFQ8IZ41 740 aa13□□□□□ -0.33
VPS9D1-206ENST00000567379 PIH1D3Q9NQM4 214 aaKnown RBP13□□□□□ -0.33
VPS9D1-206ENST00000567379 CHMP5Q9NZZ3 219 aa13□□□□□ -0.33
VPS9D1-206ENST00000567379 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
VPS9D1-206ENST00000567379 ZNF804BA4D1E1 1349 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 MAST3O60307 1309 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 PNPLA7Q6ZV29 1317 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 IDH1O75874 414 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 CHGBP05060 677 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 ADD2P35612 726 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 PTGER2P43116 358 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 MAP3K12Q12852 859 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 KRT32Q14532 448 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 UBE3CQ15386 1083 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 SLC9C2Q5TAH2 1124 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 JAKMIP1Q96N16 626 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 UPF3BQ9BZI7 483 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 DENND2AQ9ULE3 1009 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 LEMD3Q9Y2U8 911 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 CYP46A1Q9Y6A2 500 aa12.99□□□□□ -0.33
VPS9D1-206ENST00000567379 M0R2C6 588 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 SEMA3EO15041 775 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms