RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 GTF3C6Q969F1 213 aa19.82■□□□□ 0.76
CMTM3-213ENST00000566756 NEK1Q96PY6 1258 aa19.82■□□□□ 0.76
CMTM3-213ENST00000566756 SBF2Q86WG5 1849 aa19.82■□□□□ 0.76
CMTM3-213ENST00000566756 SH3TC1Q8TE82 1336 aa19.82■□□□□ 0.76
CMTM3-213ENST00000566756 MAP3K11Q16584 847 aa19.81■□□□□ 0.76
CMTM3-213ENST00000566756 MCMDC2Q4G0Z9 681 aa19.81■□□□□ 0.76
CMTM3-213ENST00000566756 DZIP3Q86Y13 1208 aaKnown RBP19.81■□□□□ 0.76
CMTM3-213ENST00000566756 PLA2G12BQ9BX93 195 aa19.81■□□□□ 0.76
CMTM3-213ENST00000566756 DDX19AQ9NUU7 478 aaKnown RBP19.81■□□□□ 0.76
CMTM3-213ENST00000566756 ZNF609O15014 1411 aa19.81■□□□□ 0.76
CMTM3-213ENST00000566756 HMGB1P09429 215 aaKnown RBP19.81■□□□□ 0.76
CMTM3-213ENST00000566756 LMBR1LQ6UX01 489 aa19.81■□□□□ 0.76
CMTM3-213ENST00000566756 RBM43Q6ZSC3 357 aaKnown RBP19.81■□□□□ 0.76
CMTM3-213ENST00000566756 NUP62CLQ9H1M0 184 aa19.81■□□□□ 0.76
CMTM3-213ENST00000566756 HLFQ16534 295 aa19.8■□□□□ 0.76
CMTM3-213ENST00000566756 MTERF4Q7Z6M4 381 aaKnown RBP19.8■□□□□ 0.76
CMTM3-213ENST00000566756 ZBTB38Q8NAP3 1195 aaPredicted RBP19.8■□□□□ 0.76
CMTM3-213ENST00000566756 FAM200AQ8TCP9 573 aa19.8■□□□□ 0.76
CMTM3-213ENST00000566756 LLPHQ9BRT6 129 aaKnown RBP19.8■□□□□ 0.76
CMTM3-213ENST00000566756 SPTLC3Q9NUV7 552 aa19.8■□□□□ 0.76
CMTM3-213ENST00000566756 CDHR2Q9BYE9 1310 aa19.8■□□□□ 0.76
CMTM3-213ENST00000566756 UQCRHLA0A096LP55 91 aa19.79■□□□□ 0.76
CMTM3-213ENST00000566756 UQCRHP07919 91 aa19.79■□□□□ 0.76
CMTM3-213ENST00000566756 KBTBD3Q8NAB2 608 aa19.79■□□□□ 0.76
CMTM3-213ENST00000566756 ZSCAN16Q9H4T2 348 aaPredicted RBP19.79■□□□□ 0.76
CMTM3-213ENST00000566756 MYH3P11055 1940 aa19.79■□□□□ 0.76
CMTM3-213ENST00000566756 NLRP10Q86W26 655 aa19.79■□□□□ 0.76
CMTM3-213ENST00000566756 PRIMPOLQ96LW4 560 aa19.79■□□□□ 0.76
CMTM3-213ENST00000566756 TAF6LQ9Y6J9 622 aa19.79■□□□□ 0.76
CMTM3-213ENST00000566756 SPEF2Q9C093 1822 aa19.79■□□□□ 0.76
CMTM3-213ENST00000566756 SPATA32Q96LK8 384 aa19.78■□□□□ 0.76
CMTM3-213ENST00000566756 HELLSQ9NRZ9 838 aa19.78■□□□□ 0.76
CMTM3-213ENST00000566756 GOLGA6L6A8MZA4 724 aa19.77■□□□□ 0.76
CMTM3-213ENST00000566756 COL9A3Q14050 684 aaPredicted RBP19.77■□□□□ 0.76
CMTM3-213ENST00000566756 NOLC1Q14978 699 aaKnown RBP eCLIP19.77■□□□□ 0.76
CMTM3-213ENST00000566756 LEO1Q8WVC0 666 aaPredicted RBP19.77■□□□□ 0.76
CMTM3-213ENST00000566756 HMGN5P82970 282 aaKnown RBP19.77■□□□□ 0.75
CMTM3-213ENST00000566756 ZNF34Q8IZ26 560 aa19.77■□□□□ 0.75
CMTM3-213ENST00000566756 SMARCC2Q8TAQ2 1214 aa19.77■□□□□ 0.75
CMTM3-213ENST00000566756 CHMP4CQ96CF2 233 aa19.77■□□□□ 0.75
CMTM3-213ENST00000566756 DBNDD2Q9BQY9 259 aa19.77■□□□□ 0.75
CMTM3-213ENST00000566756 DSCC1Q9BVC3 393 aa19.77■□□□□ 0.75
CMTM3-213ENST00000566756 TBC1D2BQ9UPU7 963 aa19.77■□□□□ 0.75
CMTM3-213ENST00000566756 LY75O60449 1722 aa19.76■□□□□ 0.75
CMTM3-213ENST00000566756 GOLGA6L4A6NEF3 574 aa19.76■□□□□ 0.75
CMTM3-213ENST00000566756 CAVIN2O95810 425 aa19.76■□□□□ 0.75
CMTM3-213ENST00000566756 EDC3Q96F86 508 aaKnown RBP19.76■□□□□ 0.75
CMTM3-213ENST00000566756 CYP21A2P08686 494 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 LIG1P18858 919 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 TYRO3Q06418 890 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 RESTQ13127 1097 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 BCORQ6W2J9 1755 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 FERMT3Q86UX7 667 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 TCEANC2Q96MN5 208 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 CLSTN2Q9H4D0 955 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 CNTNAP4Q9C0A0 1308 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 CSF1RP07333 972 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 AGXT2Q9BYV1 514 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 TNMDQ9H2S6 317 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 FBXO3Q9UK99 471 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 CFAP45Q9UL16 551 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 KIF3AQ9Y496 699 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 MRVI1Q9Y6F6 885 aa19.75■□□□□ 0.75
CMTM3-213ENST00000566756 RGL2O15211 777 aa19.74■□□□□ 0.75
CMTM3-213ENST00000566756 PFKFB2O60825 505 aa19.74■□□□□ 0.75
CMTM3-213ENST00000566756 ATL3Q6DD88 541 aa19.74■□□□□ 0.75
CMTM3-213ENST00000566756 NAA16Q6N069 864 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-213ENST00000566756 Q6ZUG5 572 aa19.74■□□□□ 0.75
CMTM3-213ENST00000566756 MYRIPQ8NFW9 859 aa19.74■□□□□ 0.75
CMTM3-213ENST00000566756 IL15P40933 162 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-213ENST00000566756 SEPT12Q8IYM1 358 aa19.74■□□□□ 0.75
CMTM3-213ENST00000566756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.74■□□□□ 0.75
CMTM3-213ENST00000566756 FAM89AQ96GI7 184 aa19.74■□□□□ 0.75
CMTM3-213ENST00000566756 DNAJC2Q99543 621 aaKnown RBP19.74■□□□□ 0.75
CMTM3-213ENST00000566756 QTRT2Q9H974 415 aaKnown RBP19.74■□□□□ 0.75
CMTM3-213ENST00000566756 RC3H1Q5TC82 1133 aaKnown RBP19.73■□□□□ 0.75
CMTM3-213ENST00000566756 DHX32Q7L7V1 743 aaKnown RBP19.73■□□□□ 0.75
CMTM3-213ENST00000566756 TTC12Q9H892 705 aaPredicted RBP19.73■□□□□ 0.75
CMTM3-213ENST00000566756 DACT1Q9NYF0 836 aa19.73■□□□□ 0.75
CMTM3-213ENST00000566756 TAF1LQ8IZX4 1826 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 AP5Z1O43299 807 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 CIAO1O76071 339 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 CAMTA2O94983 1202 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 GPTP24298 496 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 GTF2F1P35269 517 aaKnown RBP eCLIP19.72■□□□□ 0.75
CMTM3-213ENST00000566756 ATG9AQ7Z3C6 839 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 LINC00116Q8NCU8 138 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 BRF1Q92994 677 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 CHMP3Q9Y3E7 222 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 LAMA4Q16363 1823 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 STK3Q13188 491 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 ZMYM1Q5SVZ6 1142 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 FAM173BQ6P4H8 233 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 PTF1AQ7RTS3 328 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 FBXL16Q8N461 479 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 KIAA1524Q8TCG1 905 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 AK7Q96M32 723 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 PAG1Q9NWQ8 432 aa19.72■□□□□ 0.75
CMTM3-213ENST00000566756 UBN2Q6ZU65 1347 aa19.71■□□□□ 0.75
CMTM3-213ENST00000566756 PARP10Q53GL7 1025 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms